PDB Search results for query - 日本蛋白质结构数据库

PDB: 115 results

CLM-1 Mouse Myeloid Receptor Extracellular Domain
Descriptor:	CLM-1
Authors:	Nelson, C.N, Burton, R.L, Fremont, D.H, Midwest Center for Structural Genomics (MCSG)
Deposit date:	2005-05-15
Release date:	2005-05-24
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal Structure of the Mouse CLM-1 Ectodomain To be Published

2HG0

Structure of the West Nile Virus envelope glycoprotein
Descriptor:	2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein
Authors:	Nybakken, G.E, Nelson, C.A, Chen, B.R, Diamond, M.S, Fremont, D.H.
Deposit date:	2006-06-26
Release date:	2006-11-07
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Crystal structure of the West Nile virus envelope glycoprotein. J.Virol., 80, 2006

5KVG

Zika specific antibody, ZV-67, bound to ZIKA envelope DIII
Descriptor:	CHLORIDE ION, ZIKA Envelope DIII, ZV-67 Antibody Fab Heavy Chain, ...
Authors:	Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2016-07-14
Release date:	2016-08-03
Last modified:	2016-08-24
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Structural Basis of Zika Virus-Specific Antibody Protection. Cell, 166, 2016

5KVF

Zika specific antibody, ZV-64, bound to ZIKA envelope DIII
Descriptor:	GLYCEROL, ZV-64 Antibody Fab Heavy Chain, ZV-64 Antibody Fab Light Chain, ...
Authors:	Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2016-07-14
Release date:	2016-08-03
Last modified:	2016-08-24
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Structural Basis of Zika Virus-Specific Antibody Protection. Cell, 166, 2016

2NZ1

Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The CC-Chemokine CCL2/MCP-1
Descriptor:	Hypothetical protein GAMMAHV.M3, Small inducible cytokine A2
Authors:	Alexander-Brett, J.M, Fremont, D.H.
Deposit date:	2006-11-22
Release date:	2007-12-25
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Dual GPCR and GAG mimicry by the M3 chemokine decoy receptor. J.Exp.Med., 204, 2007

5KVE

Zika specific antibody, ZV-48, bound to ZIKA envelope DIII
Descriptor:	1,2-ETHANEDIOL, ACETATE ION, Genome polyprotein, ...
Authors:	Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2016-07-14
Release date:	2016-08-10
Last modified:	2019-12-25
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Structural Basis of Zika Virus-Specific Antibody Protection. Cell, 166, 2016

5KVD

Zika specific antibody, ZV-2, bound to ZIKA envelope DIII
Descriptor:	1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SODIUM ION, ...
Authors:	Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2016-07-14
Release date:	2016-08-03
Last modified:	2016-08-24
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	Structural Basis of Zika Virus-Specific Antibody Protection. Cell, 166, 2016

2NYZ

Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The C- Chemokine XCL1
Descriptor:	Hypothetical protein GAMMAHV.M3, Lymphotactin
Authors:	Alexander-Brett, J.M, Fremont, D.H.
Deposit date:	2006-11-21
Release date:	2007-12-25
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Dual GPCR and GAG mimicry by the M3 chemokine decoy receptor. J.Exp.Med., 204, 2007

2GRK

Crystal structure of ectromelia virus EVM1 chemokine binding protein
Descriptor:	EVM001
Authors:	Arnold, P.L, Fremont, D.H.
Deposit date:	2006-04-24
Release date:	2006-05-09
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Structural determinants of chemokine binding by an ectromelia virus-encoded decoy receptor. J.Virol., 80, 2006

2FWO

MHC Class I H-2Kd heavy chain in complex with beta-2microglobulin and peptide derived from influenza nucleoprotein
Descriptor:	Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ...
Authors:	Mitaksov, V, Fremont, D.H.
Deposit date:	2006-02-02
Release date:	2006-02-21
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Structural Definition of the H-2Kd Peptide-binding Motif. J.Biol.Chem., 281, 2006

6PLK

Crystal structure of ZIKV-116 Fab in complex with ZIKV envelope DIII
Descriptor:	Env, ZIKV-116 heavy chain, ZIKV-116 light chain
Authors:	Zhao, H, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2019-07-01
Release date:	2019-11-20
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Mechanism of differential Zika and dengue virus neutralization by a public antibody lineage targeting the DIII lateral ridge. J.Exp.Med., 217, 2020

7K9H

SARS-CoV-2 Spike in complex with neutralizing Fab 2B04 (one up, two down conformation)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2B04 heavy chain, ...
Authors:	Errico, J.M, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2020-09-29
Release date:	2021-09-29
Last modified:	2021-11-10
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD. Cell Rep, 37, 2021

7K9J

SARS-CoV-2 Spike in complex with neutralizing Fab 2H04 (three down conformation)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2H04 heavy chain, ...
Authors:	Errico, J.M, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2020-09-29
Release date:	2021-09-29
Last modified:	2021-11-10
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD. Cell Rep, 37, 2021

6N08

Crystal structure of hemagglutinin from influenza virus A/Netherlands/209/1980 (H3N2)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:	Dai, Y.N, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2018-11-06
Release date:	2019-05-15
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.916 Å)
Cite:	Crystal structure of hemagglutinin from influenza virus A/Netherlands/209/1980 (H3N2) to be published

6MYM

Crystal structure of hemagglutinin from influenza virus A/Phillipines/2/1982 (H3N2)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:	Dai, Y.N, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2018-11-01
Release date:	2019-05-15
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.45 Å)
Cite:	Crystal structure of hemagglutinin from influenza virus A/Phillipines/2/1982 (H3N2) To be published

4PDC

Crystal structure of Cowpox virus CPXV018 (OMCP) bound to human NKG2D
Descriptor:	CPXV018 protein, NKG2-D type II integral membrane protein
Authors:	Lazear, E, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2014-04-17
Release date:	2014-05-21
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.991 Å)
Cite:	Structural basis of cowpox evasion of NKG2D immunosurveillance Biorxiv, 2019

6MXU

Crystal structure of hemagglutinin from influenza virus A/Texas/1/1977 (H3N2)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:	Dai, Y.N, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2018-10-31
Release date:	2019-05-15
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Crystal structure of hemagglutinin from influenza virus A/Texas/1/1977 (H3N2) To be Published

6MZK

Crystal structure of hemagglutinin from influenza virus A/Pennsylvania/14/2010 (H3N2)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:	Dai, Y.N, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2018-11-05
Release date:	2019-05-15
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structure of hemagglutinin from influenza virus A/Pennsylvania/14/2010 (H3N2) to be published

7K9K

SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2H04 (local refinement)
Descriptor:	2H04 heavy chain, 2H04 light chain, Spike protein S1, ...
Authors:	Errico, J.M, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2020-09-29
Release date:	2021-09-29
Last modified:	2021-11-10
Method:	ELECTRON MICROSCOPY (3.14 Å)
Cite:	Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD. Cell Rep, 37, 2021

4OIG

Dengue Virus Non-structural Protein NS1
Descriptor:	Non-structural protein 1, NS1, SULFATE ION
Authors:	Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2014-01-19
Release date:	2014-03-05
Last modified:	2017-11-22
Method:	X-RAY DIFFRACTION (2.69 Å)
Cite:	Structural basis of Flavivirus NS1 assembly and antibody recognition. Proc.Natl.Acad.Sci.USA, 111, 2014

4OII

West Nile Virus NS1 in complex with neutralizing 22NS1 antibody Fab
Descriptor:	Heavy Chain of Fab fragment of 22NS1 Antibody, Light Chain of Fab fragment of 22NS1 Antibody, NON-STRUCTURAL PROTEIN NS1
Authors:	Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2014-01-19
Release date:	2014-03-05
Last modified:	2017-11-22
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Structural basis of Flavivirus NS1 assembly and antibody recognition. Proc.Natl.Acad.Sci.USA, 111, 2014

7K9I

SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2B04 (local refinement)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2B04 heavy chain, 2B04 light chain, ...
Authors:	Errico, J.M, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2020-09-29
Release date:	2021-09-29
Last modified:	2021-11-10
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD. Cell Rep, 37, 2021

1XAK

STRUCTURE OF THE SARS-CORONAVIRUS ORF7A ACCESSORY PROTEIN
Descriptor:	SARS ORF7A ACCESSORY PROTEIN
Authors:	Nelson, C.A, Lee, C.A, Fremont, D.H, Midwest Center for Structural Genomics (MCSG)
Deposit date:	2004-08-26
Release date:	2004-10-05
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structure and intracellular targeting of the SARS-coronavirus Orf7a accessory protein. Structure, 13, 2005

4OIE

West Nile Virus Non-structural Protein NS1
Descriptor:	GLYCEROL, NON-STRUCTURAL PROTEIN NS1
Authors:	Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2014-01-19
Release date:	2014-03-05
Last modified:	2014-04-23
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Structural basis of Flavivirus NS1 assembly and antibody recognition. Proc.Natl.Acad.Sci.USA, 111, 2014

1F3J

HISTOCOMPATIBILITY ANTIGEN I-AG7
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, LYSOZYME C, ...
Authors:	Latek, R.R, Unanue, E.R, Fremont, D.H.
Deposit date:	2000-06-04
Release date:	2000-09-20
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (3.1 Å)
Cite:	Structural basis of peptide binding and presentation by the type I diabetes-associated MHC class II molecule of NOD mice. Immunity, 12, 2000

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Total results:	115
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Fremont, D"