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PDB: 183 results

4XV4
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BU of 4xv4 by Molmil
CcP gateless cavity
Descriptor: 2-AMINO-5-METHYLTHIAZOLE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
6H75
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BU of 6h75 by Molmil
SiaP A11N in complex with Neu5Ac (RT)
Descriptor: N-acetyl-beta-neuraminic acid, Sialic acid-binding periplasmic protein SiaP
Authors:Fischer, M, Darby, J.F, Brannigan, J.A, Turkenburg, J, Hubbard, R.E.
Deposit date:2018-07-30
Release date:2019-08-14
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Water Networks Can Determine the Affinity of Ligand Binding to Proteins.
J.Am.Chem.Soc., 141, 2019
6H76
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BU of 6h76 by Molmil
SiaP in complex with Neu5Ac (RT)
Descriptor: CESIUM ION, CHLORIDE ION, N-acetyl-beta-neuraminic acid, ...
Authors:Fischer, M, Darby, J.F, Brannigan, J.A, Turkenburg, J, Hubbard, R.E.
Deposit date:2018-07-30
Release date:2019-08-14
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Water Networks Can Determine the Affinity of Ligand Binding to Proteins.
J.Am.Chem.Soc., 141, 2019
5U5Z
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BU of 5u5z by Molmil
CcP gateless cavity
Descriptor: 4-methyl-2-phenyl-1H-imidazole, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U5U
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BU of 5u5u by Molmil
CcP gateless cavity
Descriptor: ISONICOTINAMIDINE, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U5Y
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BU of 5u5y by Molmil
CcP gateless cavity
Descriptor: 2-methylimidazo[1,2-a]pyridin-3-amine, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U60
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BU of 5u60 by Molmil
CcP gateless cavity
Descriptor: (4E)-4-hydrazinylidene-1,4-dihydroquinoline, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U5W
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BU of 5u5w by Molmil
CcP gateless cavity
Descriptor: 3-methylquinolin-4-amine, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U5X
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BU of 5u5x by Molmil
CcP gateless cavity
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Peroxidase, THIOPHENE-3-CARBOXIMIDAMIDE
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U5V
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BU of 5u5v by Molmil
CcP gateless cavity
Descriptor: 1H-benzimidazol-4-amine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.222 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U61
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BU of 5u61 by Molmil
CcP gateless cavity
Descriptor: 5-cyclopropyl-1H-imidazol-2-amine, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.222 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4XVA
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BU of 4xva by Molmil
Crystal structure of wild type cytochrome c peroxidase
Descriptor: BENZIMIDAZOLE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
4XV5
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BU of 4xv5 by Molmil
CcP gateless cavity
Descriptor: BENZIMIDAZOLE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
4XV7
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BU of 4xv7 by Molmil
CcP gateless cavity
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
4XV8
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BU of 4xv8 by Molmil
CcP gateless cavity
Descriptor: BENZAMIDINE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
4XV6
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BU of 4xv6 by Molmil
CcP gateless cavity
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
2XXK
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BU of 2xxk by Molmil
SiaP complex
Descriptor: N-acetyl-beta-neuraminic acid, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2010-11-10
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Siap Complex
To be Published
2XWO
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BU of 2xwo by Molmil
SiaP R147E mutant in complex with sialylamide
Descriptor: (2S,4S,5R,6R)-5-acetamido-2,4-dihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxamide, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2010-11-04
Release date:2011-11-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Tripartite ATP-Independent Periplasmic (Trap) Transporters Use an Arginine-Mediated Selectivity Filter for High Affinity Substrate Binding.
J.Biol.Chem., 290, 2015
2XWV
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BU of 2xwv by Molmil
SiaP complex
Descriptor: N-acetyl-beta-neuraminic acid, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2010-11-05
Release date:2011-11-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Tripartite ATP-Independent Periplasmic (Trap) Transporters Use an Arginine-Mediated Selectivity Filter for High Affinity Substrate Binding.
J.Biol.Chem., 290, 2015
2XWK
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BU of 2xwk by Molmil
SiaP R147A mutant in complex with Neu5Ac
Descriptor: N-acetyl-beta-neuraminic acid, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2010-11-04
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Tripartite ATP-Independent Periplasmic (Trap) Transporters Use an Arginine-Mediated Selectivity Filter for High Affinity Substrate Binding.
J.Biol.Chem., 290, 2015
2XWI
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BU of 2xwi by Molmil
SiaP R147K mutant in complex with Neu5Ac
Descriptor: N-acetyl-beta-neuraminic acid, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2010-11-04
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Tripartite ATP-Independent Periplasmic (Trap) Transporters Use an Arginine-Mediated Selectivity Filter for High Affinity Substrate Binding.
J.Biol.Chem., 290, 2015
2V4C
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BU of 2v4c by Molmil
Structure of sialic acid binding protein (SiaP) in the presence of KDN
Descriptor: SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP, deamino-beta-neuraminic acid
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2008-09-18
Release date:2010-03-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Water networks can determine the affinity of ligand binding to proteins.
J.Am.Chem.Soc., 2019
2XA5
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BU of 2xa5 by Molmil
Structure of substrate binding protein SiaP (A11N) in complex with Neu5Ac
Descriptor: N-acetyl-beta-neuraminic acid, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2010-03-26
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Water networks can determine the affinity of ligand binding to proteins.
J.Am.Chem.Soc., 2019
2WX9
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BU of 2wx9 by Molmil
Crystal structure of the sialic acid binding periplasmic protein SiaP
Descriptor: N-glycolyl-beta-neuraminic acid, SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2009-11-05
Release date:2011-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Water networks can determine the affinity of ligand binding to proteins.
J.Am.Chem.Soc., 2019
2WYP
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BU of 2wyp by Molmil
Crystal structure of sialic acid binding protein
Descriptor: SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP, deamino-beta-neuraminic acid
Authors:Fischer, M, Hubbard, R.E.
Deposit date:2009-11-18
Release date:2011-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Water networks can determine the affinity of ligand binding to proteins.
J.Am.Chem.Soc., 2019

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