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PDB: 104 results

3BWO
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L-tryptophan aminotransferase
Descriptor: L-tryptophan aminotransferase
Authors:Ferrer, J.-L, Noel, J.P, Pojer, F, Bowman, M, Chory, J, Tao, Y.
Deposit date:2008-01-10
Release date:2009-03-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for the shade avoidance response of plants
To be Published
3BWN
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L-tryptophan aminotransferase
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, L-tryptophan aminotransferase, PHENYLALANINE, ...
Authors:Ferrer, J.-L, Noel, J.P, Pojer, F, Bowman, M, Chory, J, Tao, Y.
Deposit date:2008-01-10
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants
Cell(Cambridge,Mass.), 133, 2008
3B5I
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Crystal structure of Indole-3-acetic Acid Methyltransferase
Descriptor: MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein
Authors:Ferrer, J.-L, Noel, J.P.
Deposit date:2007-10-26
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural, Biochemical, and Phylogenetic Analyses Suggest That Indole-3-Acetic Acid Methyltransferase Is an Evolutionarily Ancient Member of the SABATH Family.
Plant Physiol., 146, 2008
1CML
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CHALCONE SYNTHASE FROM ALFALFA COMPLEXED WITH MALONYL-COA
Descriptor: MALONYL-COENZYME A, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), PROTEIN (CHALCONE SYNTHASE), ...
Authors:Ferrer, J.-L, Jez, J, Bowman, M.E, Dixon, R, Noel, J.P.
Deposit date:1999-03-30
Release date:1999-08-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
1BQ6
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CHALCONE SYNTHASE FROM ALFALFA WITH COENZYME A
Descriptor: CHALCONE SYNTHASE, COENZYME A, SULFATE ION
Authors:Ferrer, J.-L, Bowman, M.E, Jez, J, Dixon, R, Noel, J.P.
Deposit date:1998-08-21
Release date:1999-08-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
1CGK
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CHALCONE SYNTHASE FROM ALFALFA COMPLEXED WITH NARINGENIN
Descriptor: NARINGENIN, PROTEIN (CHALCONE SYNTHASE)
Authors:Ferrer, J.-L, Jez, J, Bowman, M.E, Dixon, R, Noel, J.P.
Deposit date:1999-03-25
Release date:1999-09-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
1CGZ
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CHALCONE SYNTHASE FROM ALFALFA COMPLEXED WITH RESVERATROL
Descriptor: PROTEIN (CHALCONE SYNTHASE), RESVERATROL
Authors:Ferrer, J.-L, Jez, J, Bowman, M.E, Dixon, R, Noel, J.P.
Deposit date:1999-03-26
Release date:1999-08-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
1CHW
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CHALCONE SYNTHASE FROM ALFALFA COMPLEXED WITH HEXANOYL-COA
Descriptor: HEXANOYL-COENZYME A, PROTEIN (CHALCONE SYNTHASE)
Authors:Ferrer, J.-L, Jez, J, Bowman, M.E, Dixon, R, Noel, J.P.
Deposit date:1999-03-30
Release date:1999-08-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
1BI5
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CHALCONE SYNTHASE FROM ALFALFA
Descriptor: CHALCONE SYNTHASE
Authors:Ferrer, J.L, Jez, J.M, Bowman, M.E, Dixon, R.A, Noel, J.P.
Deposit date:1998-06-22
Release date:1999-06-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
1QLV
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Pyrone synthase (PYS) from Gerbera hybrida
Descriptor: PYRONE SYNTHASE
Authors:Ferrer, J.-L, Jez, J.M, Bowman, M.E, Schroder, J, Noel, J.P.
Deposit date:1999-09-16
Release date:2000-09-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pyrone Synthase (Pys) from Gerbera Hybrida
To be Published
1U1H
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A. thaliana cobalamine independent methionine synthase
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, METHIONINE, SULFATE ION, ...
Authors:Ferrer, J.-L, Ravanel, S, Robert, M, Dumas, R.
Deposit date:2004-07-15
Release date:2004-09-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate
J.Biol.Chem., 279, 2004
1U1J
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A. thaliana cobalamine independent methionine synthase
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, METHIONINE, ...
Authors:Ferrer, J.-L, Ravanel, S, Robert, M, Dumas, R.
Deposit date:2004-07-15
Release date:2004-09-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate
J.Biol.Chem., 279, 2004
1U22
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A. thaliana cobalamine independent methionine synthase
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, 2-AMINO-4-MERCAPTO-BUTYRIC ACID, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, ...
Authors:Ferrer, J.-L, Ravanel, S, Robert, M, Dumas, R.
Deposit date:2004-07-16
Release date:2004-09-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate
J.Biol.Chem., 279, 2004
1U1U
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A. thaliana cobalamine independent methionine synthase
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, SULFATE ION, ZINC ION
Authors:Ferrer, J.-L, Ravanel, S, Robert, M, Dumas, R.
Deposit date:2004-07-16
Release date:2004-09-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate
J.Biol.Chem., 279, 2004
1SUI
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Alfalfa caffeoyl coenzyme A 3-O-methyltransferase
Descriptor: CALCIUM ION, Caffeoyl-CoA O-methyltransferase, FERULOYL COENZYME A, ...
Authors:Ferrer, J.-L, Zubieta, C, Dixon, R.A, Noel, J.P.
Deposit date:2004-03-26
Release date:2005-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Alfalfa Caffeoyl Coenzyme A 3-O-Methyltransferase
Plant Physiol., 137, 2005
1SUS
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BU of 1sus by Molmil
Crystal structure of alfalfa feruoyl coenzyme A 3-O-methyltransferase
Descriptor: CALCIUM ION, Caffeoyl-CoA O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Ferrer, J.-L, Zubieta, C, Dixon, R.A, Noel, J.P.
Deposit date:2004-03-26
Release date:2005-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Alfalfa Caffeoyl Coenzyme A 3-O-Methyltransferase
Plant Physiol., 137, 2005
2Q60
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BU of 2q60 by Molmil
Crystal structure of the ligand binding domain of polyandrocarpa misakiensis rxr in tetramer in absence of ligand
Descriptor: Retinoid X receptor
Authors:Borel, F, De Groot, A, Juillan-Binard, C, De Rosny, E, Laudet, V, Pebay-Peyroula, E, Fontecilla-Camps, J.-C, Ferrer, J.-L.
Deposit date:2007-06-04
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the ligand-binding domain of the retinoid X receptor from the ascidian polyandrocarpa misakiensis.
Proteins, 74, 2008
2FA0
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BU of 2fa0 by Molmil
HMG-CoA synthase from Brassica juncea in complex with HMG-CoA and covalently bound to HMG-CoA
Descriptor: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, HMG-CoA synthase
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-06
Release date:2006-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2F9A
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HMG-CoA synthase from Brassica juncea in complex with F-244
Descriptor: (7R,12R,13R)-13-formyl-12,14-dihydroxy-3,5,7-trimethyltetradeca-2,4-dienoic acid, 3-Hydroxy-3-methylglutaryl coenzyme A synthase 1
Authors:Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P.
Deposit date:2005-12-05
Release date:2006-07-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5YRS
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BU of 5yrs by Molmil
X-ray Snapshot of HIV-1 Protease in Action: Observation of Tetrahedral Intermediate and Its SIHB with Catalytic Aspartate
Descriptor: PROTEASE, RT-RH oligopeprtide
Authors:Das, A, Mahale, S, Prashar, V, Bihani, S, Ferrer, J.-L, Hosur, M.V.
Deposit date:2017-11-10
Release date:2018-03-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:X-ray snapshot of HIV-1 protease in action: observation of tetrahedral intermediate and short ionic hydrogen bond SIHB with catalytic aspartate.
J. Am. Chem. Soc., 132, 2010
2F1K
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Crystal structure of Synechocystis arogenate dehydrogenase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, prephenate dehydrogenase
Authors:Legrand, P, Dumas, R, Seux, M, Rippert, P, Ravelli, R, Ferrer, J.-L, Matringe, M.
Deposit date:2005-11-14
Release date:2006-05-09
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biochemical Characterization and Crystal Structure of Synechocystis Arogenate Dehydrogenase Provide Insights into Catalytic Reaction
Structure, 14, 2006
1OSH
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BU of 1osh by Molmil
A Chemical, Genetic, and Structural Analysis of the nuclear bile acid receptor FXR
Descriptor: Bile acid receptor, METHYL 3-{3-[(CYCLOHEXYLCARBONYL){[4'-(DIMETHYLAMINO)BIPHENYL-4-YL]METHYL}AMINO]PHENYL}ACRYLATE
Authors:Downes, M, Verdecia, M.A, Roecker, A.J, Hughes, R, Hogenesch, J.B, Kast-Woelbern, H.R, Bowman, M.E, Ferrer, J.-L, Anisfeld, A.M, Edwards, P.A, Rosenfeld, J.M, Alvarez, J.G.A, Noel, J.P, Nicolaou, K.C, Evans, R.M.
Deposit date:2003-03-19
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A chemical, genetic, and structural analysis of the nuclear bile acid receptor FXR
Mol.Cell, 11, 2003
1ND7
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BU of 1nd7 by Molmil
Conformational Flexibility Underlies Ubiquitin Ligation Mediated by the WWP1 HECT domain E3 Ligase
Descriptor: WW domain-containing protein 1
Authors:Verdecia, M.A, Joaziero, C.A.P, Wells, N.J, Ferrer, J.-L, Bowman, M.E, Hunter, T, Noel, J.P.
Deposit date:2002-12-08
Release date:2003-09-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational Flexibility Underlies Ubiquitin Ligation Mediated by the WWP1 HECT domain E3 Ligase
Mol.Cell, 11, 2003
3QYW
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Crystal structure of ERK2 in complex with an inhibitor
Descriptor: 6-(3-bromophenyl)-7H-purin-2-amine, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, ...
Authors:Gelin, M, Pochet, S, Hoh, F, Pirochi, M, Guichou, J.-F, Ferrer, J.-L, Labesse, G.
Deposit date:2011-03-04
Release date:2011-08-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:In-plate protein crystallization, in situ ligand soaking and X-ray diffraction.
Acta Crystallogr.,Sect.D, 67, 2011
3QYZ
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Crystal structure of ERK2 in complex with an inhibitor
Descriptor: 5'-azido-8-bromo-5'-deoxyadenosine, BETA-MERCAPTOETHANOL, DIMETHYL SULFOXIDE, ...
Authors:Gelin, M, Pochet, S, Hoh, F, Pirochi, M, Guichou, J.-F, Ferrer, J.-L, Labesse, G.
Deposit date:2011-03-04
Release date:2011-08-24
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:In-plate protein crystallization, in situ ligand soaking and X-ray diffraction.
Acta Crystallogr.,Sect.D, 67, 2011

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