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PDB: 98 results

1TLR
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SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES
Descriptor: RNA TETRALOOP RECEPTOR (5'-R(GGCCUAAGACUUCGGUUAUGGCC)-3')
Authors:Butcher, S.E, Dieckmann, T, Feigon, J.
Deposit date:1997-09-11
Release date:1997-11-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a GAAA tetraloop receptor RNA.
EMBO J., 16, 1997
1K4B
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STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES
Descriptor: 5'-R(*GP*GP*UP*UP*CP*AP*GP*UP*UP*GP*AP*AP*CP*C)-3'
Authors:Wu, H, Yang, P.K, Butcher, S.E, Kang, S, Chanfreau, G, Feigon, J.
Deposit date:2001-10-07
Release date:2001-12-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel family of RNA tetraloop structure forms the recognition site for Saccharomyces cerevisiae RNase III.
EMBO J., 20, 2001
1K4A
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BU of 1k4a by Molmil
STRUCTURE OF AGAA RNA TETRALOOP, NMR, 20 STRUCTURES
Descriptor: 5'-R(*GP*GP*UP*UP*CP*AP*GP*AP*AP*GP*AP*AP*CP*C)-3'
Authors:Wu, H, Yang, P.K, Butcher, S.E, Kang, S, Chanfreau, G, Feigon, J.
Deposit date:2001-10-07
Release date:2001-12-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel family of RNA tetraloop structure forms the recognition site for Saccharomyces cerevisiae RNase III.
EMBO J., 20, 2001
1F4I
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BU of 1f4i by Molmil
SOLUTION STRUCTURE OF THE HHR23A UBA(2) MUTANT P333E, DEFICIENT IN BINDING THE HIV-1 ACCESSORY PROTEIN VPR
Descriptor: UV EXCISION REPAIR PROTEIN PROTEIN RAD23 HOMOLOG A
Authors:Withers-Ward, E.S, Mueller, T.D, Chen, I.S, Feigon, J.
Deposit date:2000-06-07
Release date:2000-12-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Biochemical and structural analysis of the interaction between the UBA(2) domain of the DNA repair protein HHR23A and HIV-1 Vpr.
Biochemistry, 39, 2000
1DV0
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Refined NMR solution structure of the C-terminal UBA domain of the human homologue of RAD23A (HHR23A)
Descriptor: DNA REPAIR PROTEIN HHR23A
Authors:Withers-Ward, E.S, Mueller, T.D, Chen, I.S, Feigon, J.
Deposit date:2000-01-19
Release date:2000-02-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Biochemical and structural analysis of the interaction between the UBA(2) domain of the DNA repair protein HHR23A and HIV-1 Vpr
Biochemistry, 39, 2000
1RVH
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BU of 1rvh by Molmil
SOLUTION STRUCTURE OF THE DNA DODECAMER GCAAAATTTTGC
Descriptor: 5'-D(*GP*CP*AP*AP*AP*AP*TP*TP*TP*TP*GP*C)-3'
Authors:Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J.
Deposit date:2003-12-13
Release date:2004-02-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum.
Proc.Natl.Acad.Sci.USA, 101, 2004
1RVI
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BU of 1rvi by Molmil
SOLUTION STRUCTURE OF THE DNA DODECAMER CGTTTTAAAACG
Descriptor: 5'-D(*CP*GP*TP*TP*TP*TP*AP*AP*AP*AP*CP*G)-3'
Authors:Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J.
Deposit date:2003-12-13
Release date:2004-02-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum.
Proc.Natl.Acad.Sci.USA, 101, 2004
2K96
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BU of 2k96 by Molmil
Solution structure of the RDC-refined P2B-P3 pseudoknot from human telomerase RNA (delta U177)
Descriptor: TELOMERASE RNA P2B-P3 PSEUDOKNOT
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
1T4L
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Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with the 5' terminal RNA hairpin of snR47 precursor
Descriptor: 5' terminal hairpin of snR47 precursor, Ribonuclease III
Authors:Wu, H, Henras, A, Chanfreau, G, Feigon, J.
Deposit date:2004-04-29
Release date:2004-06-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III.
Proc.Natl.Acad.Sci.USA, 101, 2004
1P9C
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NMR solution structure of the C-terminal ubiquitin-interacting motif of the proteasome subunit S5a
Descriptor: 26S proteasome non-ATPase regulatory subunit 4
Authors:Mueller, T.D, Feigon, J.
Deposit date:2003-05-10
Release date:2003-10-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
1J5N
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BU of 1j5n by Molmil
Solution Structure of the Non-Sequence-Specific HMGB protein NHP6A in complex with SRY DNA
Descriptor: 5'-D(*CP*TP*GP*AP*AP*CP*AP*AP*TP*CP*AP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*TP*GP*AP*TP*TP*GP*TP*TP*CP*AP*G)-3', Nonhistone chromosomal protein 6A
Authors:Masse, J.E, Wong, B, Yen, Y.-M, Allain, F.H.-T, Johnson, R.C, Feigon, J.
Deposit date:2002-05-15
Release date:2002-10-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding
J.Mol.Biol., 323, 2002
1P9D
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High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, UV excision repair protein RAD23 homolog A
Authors:Mueller, T.D, Feigon, J.
Deposit date:2003-05-10
Release date:2003-10-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
1RAW
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BU of 1raw by Molmil
ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES
Descriptor: ADENOSINE MONOPHOSPHATE, RNA APTAMER
Authors:Dieckmann, T, Feigon, J.
Deposit date:1996-07-17
Release date:1997-01-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of an ATP-Binding RNA Aptamer Reveals a Novel Fold
RNA, 2, 1996
1R3X
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BU of 1r3x by Molmil
INTRAMOLECULAR DNA TRIPLEX WITH RNA THIRD STRAND, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3'), RNA (5'-R(*UP*CP*UP*CP*UP*CP*UP*U)-3')
Authors:Gotfredsen, C.H, Schultze, P, Feigon, J.
Deposit date:1998-02-06
Release date:1998-05-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of an Intramolecular Pyrimidine-Purine-Pyrimidine Triplex Containing an RNA Third Strand
J.Am.Chem.Soc., 120, 1998
1RKJ
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Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target
Descriptor: 5'-R(*GP*GP*AP*UP*GP*CP*CP*UP*CP*CP*CP*GP*AP*GP*UP*GP*CP*AP*UP*CP*C)-3', Nucleolin
Authors:Johansson, C, Finger, L.D, Trantirek, L, Mueller, T.D, Kim, S, Laird-Offringa, I.A, Feigon, J.
Deposit date:2003-11-21
Release date:2004-04-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target.
J.Mol.Biol., 337, 2004
1LWM
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BU of 1lwm by Molmil
Solution Structure of the Sequence-Non-Specific HMGB protein NHP6A
Descriptor: NONHISTONE CHROMOSOMAL PROTEIN 6A
Authors:Masse, J.E, Wong, B, Yen, Y.-M, Allain, F.H.-T, Johnson, R.C, Feigon, J.
Deposit date:2002-05-31
Release date:2002-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding
J.Mol.Biol., 323, 2002
1TP4
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BU of 1tp4 by Molmil
Solution structure of the XPC binding domain of hHR23A protein
Descriptor: UV excision repair protein RAD23 homolog A
Authors:Kamionka, M, Feigon, J.
Deposit date:2004-06-15
Release date:2004-09-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the XPC binding domain of hHR23A reveals hydrophobic patches for protein interaction
Protein Sci., 13, 2004
1LWA
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BU of 1lwa by Molmil
Solution Structure of SRY_DNA
Descriptor: 5'-D(*CP*TP*GP*AP*AP*CP*AP*AP*TP*CP*AP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*TP*GP*AP*TP*TP*GP*TP*TP*CP*AP*G)-3'
Authors:Masse, J.E, Wong, B, Yen, Y.-M, Allain, F.H.-T, Johnson, R.C, Feigon, J.
Deposit date:2002-05-30
Release date:2002-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding
J.Mol.Biol., 323, 2002
1CG7
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BU of 1cg7 by Molmil
HMG PROTEIN NHP6A FROM SACCHAROMYCES CEREVISIAE
Descriptor: PROTEIN (NON HISTONE PROTEIN 6 A)
Authors:Allain, F.H.T, Yen, Y.M, Masse, J.E, Schultze, P, Dieckmann, T, Johnson, R.C, Feigon, J.
Deposit date:1999-03-27
Release date:1999-10-14
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding.
EMBO J., 18, 1999
1QWB
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BU of 1qwb by Molmil
NMR structure of 5'-r(GGACACGAAAUCCCGAAGUAGUGUCC)-3' : an RNA hairpin containing the in vitro selected consensus sequence for nucleolin RBD12
Descriptor: sNRE26
Authors:Finger, L.D, Trantirek, L, Johansson, C, Feigon, J.
Deposit date:2003-09-01
Release date:2003-11-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structures of Stem-loop RNAs that Bind the Two N-terminal RNA-binding Domains of Nucleolin
Nucleic Acids Res., 31, 2003
2LUP
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BU of 2lup by Molmil
RDC refined solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (rnt1p) in complex with the terminal RNA hairpin of snr47 precursor
Descriptor: RNA (32-MER), Ribonuclease 3
Authors:Wang, Z, Feigon, J.
Deposit date:2012-06-19
Release date:2012-07-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs.
Structure, 19, 2011
2LUQ
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BU of 2luq by Molmil
Solution structure of double-stranded RNA binding domain of S.cerevisiae RNase III (rnt1p)
Descriptor: Ribonuclease 3
Authors:Wang, Z, Feigon, J.
Deposit date:2012-06-19
Release date:2012-12-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Intrinsic Dynamics of an Extended Hydrophobic Core in the S. cerevisiae RNase III dsRBD Contributes to Recognition of Specific RNA Binding Sites.
J.Mol.Biol., 425, 2013
1P3X
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BU of 1p3x by Molmil
INTRAMOLECULAR DNA TRIPLEX WITH 1-PROPYNYL DEOXYURIDINE IN THE THIRD STRAND, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*(PDU)P*CP*(PDU)P*(DCM)P*(PDU)P*CP*(PDU)P*(PDU))-3'), DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3')
Authors:Phipps, A.K, Tarkoy, M, Schultze, P, Feigon, J.
Deposit date:1998-02-05
Release date:1998-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular DNA triplex containing 5-(1-propynyl)-2'-deoxyuridine residues in the third strand.
Biochemistry, 37, 1998
1GN7
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BU of 1gn7 by Molmil
NMR STRUCTURE OF AN INTRAMOLECULAR DNA TRIPLEX CONTAINING AN N7-GLYCOSYLATED GUANINE, 8 STRUCTURES
Descriptor: DNA (5'-D (*AP*GP*AP*GP*AP*GP*AP*AP*CP*CP*CP*CP*TP*TP*CP*TP*CP*TP* CP*TP*TP*AP*TP*AP*TP*CP*TP*GN7*TP*CP*TP*T)-3')
Authors:Schultze, P, Koshlap, K.M, Feigon, J.
Deposit date:1996-11-22
Release date:1997-05-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular DNA triplex containing an N7-glycosylated guanine which mimics a protonated cytosine.
Biochemistry, 36, 1997
1NA2
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BU of 1na2 by Molmil
Solution structure of the p2b hairpin from human telomerase RNA
Descriptor: telomerase RNA p2b hairpin
Authors:Theimer, C.A, Finger, L.D, Trantirek, L, Feigon, J.
Deposit date:2002-11-26
Release date:2003-01-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mutations linked to dyskeratosis congenita cause changes in the structural equilibrium in telomerase RNA
Proc.Natl.Acad.Sci.USA, 100, 2003

226707

数据于2024-10-30公开中

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