Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 98 results

1QWA
DownloadVisualize
BU of 1qwa by Molmil
NMR structure of 5'-r(GGAUGCCUCCCGAGUGCAUCC): an RNA hairpin derived from the mouse 5'ETS that binds nucleolin RBD12.
Descriptor: 18S ribosomal RNA, 5'ETS
Authors:Finger, L.D, Trantirek, L, Johansson, C, Feigon, J.
Deposit date:2003-09-01
Release date:2003-11-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Strucutres of Stem-loop RNAs that Bind to the Two N-terminal RNA Binding Domains of Nucleolin
Nucleic Acids Res., 31, 2003
2LUP
DownloadVisualize
BU of 2lup by Molmil
RDC refined solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (rnt1p) in complex with the terminal RNA hairpin of snr47 precursor
Descriptor: RNA (32-MER), Ribonuclease 3
Authors:Wang, Z, Feigon, J.
Deposit date:2012-06-19
Release date:2012-07-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs.
Structure, 19, 2011
1EBQ
DownloadVisualize
BU of 1ebq by Molmil
STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES
Descriptor: HIV-1 REV RESPONSIVE ELEMENT RNA
Authors:Peterson, R.D, Feigon, J.
Deposit date:1997-03-20
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide.
J.Mol.Biol., 264, 1996
1EBR
DownloadVisualize
BU of 1ebr by Molmil
STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES
Descriptor: HIV-1 REV RESPONSIVE ELEMENT RNA
Authors:Peterson, R.D, Feigon, J.
Deposit date:1997-03-20
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide.
J.Mol.Biol., 264, 1996
1EBS
DownloadVisualize
BU of 1ebs by Molmil
STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES
Descriptor: HIV-1 REV RESPONSIVE ELEMENT RNA
Authors:Peterson, R.D, Feigon, J.
Deposit date:1997-03-20
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide.
J.Mol.Biol., 264, 1996
2LBW
DownloadVisualize
BU of 2lbw by Molmil
Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p-S82W mutant
Descriptor: H/ACA ribonucleoprotein complex subunit 2
Authors:Koo, B, Park, C, Fernandez, C.F, Chim, N, Ding, Y, Chanfreau, G, Feigon, J.
Deposit date:2011-04-07
Release date:2011-07-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface.
J.Mol.Biol., 411, 2011
2LBX
DownloadVisualize
BU of 2lbx by Molmil
Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p
Descriptor: H/ACA ribonucleoprotein complex subunit 2
Authors:Koo, B, Park, C, Fernandez, C.F, Chim, N, Ding, Y, Chanfreau, G, Feigon, J.
Deposit date:2011-04-07
Release date:2011-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface.
J.Mol.Biol., 411, 2011
1P3X
DownloadVisualize
BU of 1p3x by Molmil
INTRAMOLECULAR DNA TRIPLEX WITH 1-PROPYNYL DEOXYURIDINE IN THE THIRD STRAND, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*(PDU)P*CP*(PDU)P*(DCM)P*(PDU)P*CP*(PDU)P*(PDU))-3'), DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3')
Authors:Phipps, A.K, Tarkoy, M, Schultze, P, Feigon, J.
Deposit date:1998-02-05
Release date:1998-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular DNA triplex containing 5-(1-propynyl)-2'-deoxyuridine residues in the third strand.
Biochemistry, 37, 1998
1PG1
DownloadVisualize
BU of 1pg1 by Molmil
PROTEGRIN 1 (PG1) FROM PORCINE LEUKOCYTES, NMR, 20 STRUCTURES
Descriptor: PROTEGRIN-1
Authors:Fahrner, R.L, Dieckmann, T, Harwig, S.S.L, Lehrer, R.I, Eisenberg, D, Feigon, J.
Deposit date:1998-03-20
Release date:1998-05-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of protegrin-1, a broad-spectrum antimicrobial peptide from porcine leukocytes.
Chem.Biol., 3, 1996
1NA2
DownloadVisualize
BU of 1na2 by Molmil
Solution structure of the p2b hairpin from human telomerase RNA
Descriptor: telomerase RNA p2b hairpin
Authors:Theimer, C.A, Finger, L.D, Trantirek, L, Feigon, J.
Deposit date:2002-11-26
Release date:2003-01-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mutations linked to dyskeratosis congenita cause changes in the structural equilibrium in telomerase RNA
Proc.Natl.Acad.Sci.USA, 100, 2003
2LUJ
DownloadVisualize
BU of 2luj by Molmil
Solution structure of a parallel-stranded oligoisoguanine DNA pentaplex formed by d(T(iG)4T) in the presence of Cs ions
Descriptor: DNA (5'-D(*TP*(IGU)P*(IGU)P*(IGU)P*(IGU)P*T)-3')
Authors:Kang, M, Heuberger, B, Chaput, J.C, Switzer, C, Feigon, J.
Deposit date:2012-06-14
Release date:2012-07-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of a Parallel-Stranded Oligoisoguanine DNA Pentaplex Formed by d(T(iG)4T) in the Presence of Cs(+) Ions.
Angew.Chem.Int.Ed.Engl., 51, 2012
2MNW
DownloadVisualize
BU of 2mnw by Molmil
Solution structure of the P22S mutant of N-terminal CS domain of human Shq1
Descriptor: Protein SHQ1 homolog
Authors:Singh, M, Wang, Z, Cascio, D, Feigon, J.
Deposit date:2014-04-16
Release date:2015-01-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Interactions of the CS Domain of Human H/ACA RNP Assembly Protein Shq1.
J.Mol.Biol., 427, 2015
2M22
DownloadVisualize
BU of 2m22 by Molmil
Solution structure of the helix II template boundary element from Tetrahymena telomerase RNA
Descriptor: 5'-R(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*UP*AP*AP*UP*AP*GP*AP*AP*CP*UP*GP*CP*C)-3'
Authors:Cash, D.D, Richards, R.J, Theimer, C.A, Finger, D.L, Feigon, J.
Deposit date:2012-12-11
Release date:2013-03-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the helix II template boundary element from Tetrahymena telomerase RNA
Nucleic Acids Res., 34, 2006
2M21
DownloadVisualize
BU of 2m21 by Molmil
Solution structure of the Tetrahymena telomerase RNA stem IV terminal loop
Descriptor: 5'-R(*GP*GP*CP*GP*AP*UP*AP*CP*AP*CP*UP*AP*UP*UP*UP*AP*UP*CP*GP*CP*C)-3'
Authors:Cash, D.D, Richards, R.J, Wu, H, Trantirek, L, O'Connor, C.M, Feigon, J, Collins, K.
Deposit date:2012-12-11
Release date:2013-03-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural study of elements of Tetrahymena telomerase RNA stem-loop IV domain important for function.
Rna, 12, 2006
1D3X
DownloadVisualize
BU of 1d3x by Molmil
INTRAMOLECULAR DNA TRIPLEX, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*CP*TP*T)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3')
Authors:Tarkoy, M, Phipps, A.K, Schultze, P, Feigon, J.
Deposit date:1998-02-05
Release date:1998-05-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular DNA triplex linked by hexakis(ethylene glycol) units: d(AGAGAGAA-(EG)6-TTCTCTCT-(EG)6-TCTCTCTT).
Biochemistry, 37, 1998
1AFX
DownloadVisualize
BU of 1afx by Molmil
UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*UP*GP*UP*GP*AP*AP*CP*AP*CP*C)-3')
Authors:Butcher, S.E, Dieckmann, T, Feigon, J.
Deposit date:1997-03-15
Release date:1997-05-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the loop B domain from the hairpin ribozyme.
Nat.Struct.Biol., 6, 1999
1B36
DownloadVisualize
BU of 1b36 by Molmil
SOLUTION STRUCTURE OF THE HAIRPIN RIBOZYME LOOP B DOMAIN RNA, NMR, 10 STRUCTURES
Descriptor: RNA (RNA LOOP B)
Authors:Butcher, S.E, Dieckmann, T, Feigon, J.
Deposit date:1998-12-17
Release date:1998-12-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the loop B domain from the hairpin ribozyme.
Nat.Struct.Biol., 6, 1999
2LSL
DownloadVisualize
BU of 2lsl by Molmil
Solution structure of the C-terminal domain of Tetrahymena telomerase protein p65
Descriptor: Telomerase associated protein p65
Authors:Singh, M, Wang, Z, Koo, B, Patel, A, Cascio, D, Collins, K, Feigon, J.
Deposit date:2012-05-01
Release date:2012-06-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Telomerase RNA Recognition and RNP Assembly by the Holoenzyme La Family Protein p65.
Mol.Cell, 47, 2012
2L1V
DownloadVisualize
BU of 2l1v by Molmil
Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1
Descriptor: 36-MER, 7-DEAZA-7-AMINOMETHYL-GUANINE
Authors:Kang, M, Zhang, Q, Feigon, J.
Deposit date:2010-08-06
Release date:2010-09-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA
Mol.Cell, 33, 2009
2P89
DownloadVisualize
BU of 2p89 by Molmil
Solution structure of the 3' pseudouridyation pocket of U65 snoRNA with bound substrate
Descriptor: 28S rRNA, U65 H/ACA snoRNA
Authors:Wu, H, Feigon, J.
Deposit date:2007-03-22
Release date:2007-04-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2MIY
DownloadVisualize
BU of 2miy by Molmil
Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, RNA_(59-MER)
Authors:Kang, M, Eichhorn, C.D, Feigon, J.
Deposit date:2013-12-20
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural determinants for ligand capture by a class II preQ1 riboswitch.
Proc.Natl.Acad.Sci.USA, 111, 2014
2MHI
DownloadVisualize
BU of 2mhi by Molmil
Solution structure of the CR4/5 domain of medaka telomerase RNA
Descriptor: Medaka telomerase RNA
Authors:Kim, N, Zhang, Q, Feigon, J.
Deposit date:2013-11-23
Release date:2013-12-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and sequence elements of the CR4/5 domain of medaka telomerase RNA important for telomerase function.
Nucleic Acids Res., 42, 2014
2M8K
DownloadVisualize
BU of 2m8k by Molmil
A pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo
Descriptor: RNA (48-MER)
Authors:Cash, D.D, Cohen, O, Kim, N, Shefer, K, Brown, Y, Ulyanov, N.B, Tzfati, Y, Feigon, J.
Deposit date:2013-05-22
Release date:2013-06-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo.
Proc.Natl.Acad.Sci.USA, 110, 2013
<1234

 

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon