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PDB: 181 results

4DDN
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Structure analysis of a wound-inducible lectin ipomoelin from sweet potato
Descriptor: Ipomoelin, methyl alpha-D-galactopyranoside
Authors:Chang, W.C, Liu, K.L, Jeng, S.T, Hsu, F.C, Cheng, Y.S.
Deposit date:2012-01-19
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ipomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus.
Plos One, 7, 2012
4F7Z
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BU of 4f7z by Molmil
Conformational dynamics of exchange protein directly activated by cAMP
Descriptor: GLYCEROL, Rap guanine nucleotide exchange factor 4
Authors:White, M.A, Tsalkova, T.N, Mei, F.C, Liu, T, Woods, V.L, Cheng, X.
Deposit date:2012-05-16
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analyses of a constitutively active mutant of exchange protein directly activated by cAMP.
Plos One, 7, 2012
2OJ8
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NMR structure of the UGUU tetraloop of Duck Epsilon apical stem loop of the Hepatitis B virus
Descriptor: 5'-R(P*GP*CP*UP*GP*UP*UP*GP*U)-3'
Authors:Girard, F.C, Ottink, O.M, Ampt, K.A.M, Tessari, M, Wijmenga, S.S.
Deposit date:2007-01-12
Release date:2007-05-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Thermodynamics and NMR studies on Duck, Heron and Human HBV encapsidation signals.
Nucleic Acids Res., 35, 2007
7A04
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BU of 7a04 by Molmil
Structure of human CKa1 in complex with compound b
Descriptor: 1,2-ETHANEDIOL, 1-(phenylmethyl)-4-pyrrolidin-1-yl-pyridin-1-ium, Choline kinase alpha
Authors:Serran-Aguilera, L, Mariotto, E, Rubbini, G, Castro Navas, F.C, Marco, C, Carrasco-Jimenez, M.P, Ballarotto, M, Macchiarulo, A, Hurtado-Guerrero, R, Viola, G, Lopez-Cara, L.C.
Deposit date:2020-08-06
Release date:2020-09-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Synthesis, biological evaluation, in silico modeling and crystallization of novel small monocationic molecules with potent antiproliferative activity by dual mechanism.
Eur.J.Med.Chem., 207, 2020
7A06
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Structure of human CKa1 in complex with compound o
Descriptor: 1,2-ETHANEDIOL, 1-[(4-phenylphenyl)methyl]-4-pyrrolidin-1-yl-pyridine, Choline kinase alpha
Authors:Serran-Aguilera, L, Mariotto, E, Rubbini, G, Castro Navas, F.C, Marco, C, Carrasco-Jimenez, M.P, Ballarotto, M, Macchiarulo, A, Hurtado-Guerrero, R, Viola, G, Lopez-Cara, L.C.
Deposit date:2020-08-06
Release date:2020-09-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis, biological evaluation, in silico modeling and crystallization of novel small monocationic molecules with potent antiproliferative activity by dual mechanism.
Eur.J.Med.Chem., 207, 2020
6FZ3
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Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound
Descriptor: 2,6-bis(chloranyl)-4-[2-(4-methylpiperazin-1-yl)pyridin-4-yl]-~{N}-(1,3,5-trimethylpyrazol-4-yl)benzenesulfonamide, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Kersten, F.C, Brenk, R.
Deposit date:2018-03-13
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 63, 2020
6FZ2
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Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound
Descriptor: GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, MAGNESIUM ION, ...
Authors:Kersten, F.C, Brenk, R, Jaenicke, E.
Deposit date:2018-03-13
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 63, 2020
2I9Y
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BU of 2i9y by Molmil
Solution structure of Arabidopsis thaliana protein At1g70830, a member of the major latex protein family
Descriptor: major latex protein-like protein 28 or MLP-like protein 28
Authors:Volkman, B.F, de la Cruz, N.B, Lytle, B.L, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-09-06
Release date:2006-09-19
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structures of two Arabidopsis thaliana major latex proteins represent novel helix-grip folds.
Proteins, 76, 2009
2IFS
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Structure of the N-WASP EVH1 domain in complex with an extended WIP peptide
Descriptor: Wiskott-Aldrich Syndrome Protein interacting protein and Neural Wiskott-Aldrich syndrome protein chimera
Authors:Volkman, B.F, Peterson, F.C, Deng, Q.
Deposit date:2006-09-21
Release date:2007-01-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Multiple WASP-interacting protein recognition motifs are required for a functional interaction with N-WASP.
J.Biol.Chem., 282, 2007
2K05
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Structure of SDF1 in complex with the CXCR4 N-terminus containing sulfotyrosines at postitions 7, 12 and 21
Descriptor: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2008-01-24
Release date:2008-10-28
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12.
Sci.Signal., 1, 2008
2JP1
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Solution structure of the alternative conformation of XCL1/Lymphotactin
Descriptor: Lymphotactin
Authors:Volkman, B.F, Tuinstra, R.L, Peterson, F.C.
Deposit date:2007-04-17
Release date:2008-03-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Interconversion between two unrelated protein folds in the lymphotactin native state
Proc.Natl.Acad.Sci.Usa, 105, 2008
2K03
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Structure of SDF1 in complex with the CXCR4 N-terminus containing a sulfotyrosine at postition 21
Descriptor: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2008-01-24
Release date:2008-10-28
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal., 1, 2008
2K01
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Structure of a locked SDF1 dimer
Descriptor: Stromal cell-derived factor 1
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2008-01-23
Release date:2008-10-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal., 1, 2008
2JPP
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BU of 2jpp by Molmil
Structural basis of RsmA/CsrA RNA recognition: Structure of RsmE bound to the Shine-Dalgarno sequence of hcnA mRNA
Descriptor: RNA (5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*CP*GP*GP*AP*UP*GP*AP*AP*GP*CP*CP*C)-3'), Translational repressor
Authors:Schubert, M, Lapouge, K, Duss, O, Oberstrass, F.C, Jelesarov, I, Haas, D, Allain, F.H.-T.
Deposit date:2007-05-21
Release date:2007-08-21
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Molecular basis of messenger RNA recognition by the specific bacterial repressing clamp RsmA/CsrA
Nat.Struct.Mol.Biol., 14, 2007
2K47
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Solution structure of the C-terminal N-RNA binding domain of the Vesicular Stomatitis Virus Phosphoprotein
Descriptor: Phosphoprotein
Authors:Ribeiro, E.A, Favier, A, Gerard, F.C, Leyrat, C, Brutscher, B, Blondel, D, Ruigrok, R.W, Blackledge, M, Jamin, M.
Deposit date:2008-05-28
Release date:2008-09-09
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution Structure of the C-Terminal Nucleoprotein-RNA Binding Domain of the Vesicular Stomatitis Virus Phosphoprotein.
J.Mol.Biol., 2008
2K04
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BU of 2k04 by Molmil
Structure of SDF1 in complex with the CXCR4 N-terminus containing no sulfotyrosines
Descriptor: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2008-01-24
Release date:2008-10-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal., 1, 2008
2JQ2
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BU of 2jq2 by Molmil
NMR structure of the anticoccidial peptide PW2 in DPC micelles
Descriptor: pw2
Authors:Almeida, F.C, Tinoco, L.W, Gomes-Neto, F, Valente, A.P.
Deposit date:2007-05-28
Release date:2007-10-16
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Effect of micelle interface on the binding of anticoccidial PW2 peptide
J.Biomol.Nmr, 39, 2007
2JQV
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Solution structure At3g28950.1 from Arabidopsis thaliana
Descriptor: AIG2 protein-like
Authors:Volkman, B.F, de la Cruz, N.B, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-06-07
Release date:2007-08-14
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Solution structure of At3g28950 from Arabidopsis thaliana.
Proteins, 71, 2008
2KEC
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BU of 2kec by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KOJ
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BU of 2koj by Molmil
Solution structure of mouse Par-3 PDZ2 (residues 450-558)
Descriptor: Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-23
Release date:2009-11-10
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Macromolecular Structure Determination by NMR Sepectroscopy
Structural Bioinformatics, 2nd edition, 2009
2KQM
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Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain
Descriptor: Ig kappa chain V-I region AU
Authors:Volkman, B.F, Peterson, F.C, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2009-11-11
Release date:2010-03-16
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface.
Structure, 18, 2010
2KED
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BU of 2ked by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KOM
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BU of 2kom by Molmil
Solution structure of humar Par-3b PDZ2 (residues 451-549)
Descriptor: Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-24
Release date:2009-11-10
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Rapid, robotic, small-scale protein production for NMR screening and structure determination.
Protein Sci., 19, 2010
2KEE
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BU of 2kee by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KVB
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Solution structure of CI-MPR domain 5 bound to N-acetylglucosaminyl 6-phosphomethylmannoside
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Olson, L.J, Peterson, F.C, Volkman, B.F, Dahms, N.M.
Deposit date:2010-03-10
Release date:2010-07-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.
Proc.Natl.Acad.Sci.USA, 107, 2010

219869

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