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PDB: 197 件

8QXP
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Crystal structure of the outer membrane porin OmpW from Klebsiella pneumoniae
分子名称: OmpW protein, SULFATE ION
著者Seddon, C, Beis, K.
登録日2023-10-24
公開日2024-01-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of the outer membrane porin OmpW from the pervasive pathogen Klebsiella pneumoniae.
Acta Crystallogr.,Sect.F, 80, 2024
4RSG
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Neutron crystal structure of Ras bound to the GTP analogue GppNHp
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Knihtila, R.R, Holzapfel, G, Weiss, K.L, Meilleur, F, Mattos, C.
登録日2014-11-07
公開日2015-11-04
最終更新日2024-02-28
実験手法NEUTRON DIFFRACTION (1.907 Å)
主引用文献Neutron Crystal Structure of RAS GTPase Puts in Question the Protonation State of the GTP gamma-Phosphate.
J.Biol.Chem., 290, 2015
8RW2
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Structure of a chair-type antiparallel quadruplex-duplex hybrid at pH 6
分子名称: DNA (33-MER)
著者Vianney, Y.M, Weisz, K.
登録日2024-02-02
公開日2024-03-27
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献A pH-Responsive Topological Switch Based on a DNA Quadruplex-Duplex Hybrid.
Chemistry, 30, 2024
8PSI
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G-quadruplex with a 1-nt V-shaped loop from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
著者Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-18
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
4CU4
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FhuA from E. coli in complex with the lasso peptide microcin J25 (MccJ25)
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 3-HYDROXY-TETRADECANOIC ACID, DIPHOSPHATE, ...
著者Mathavan, I, Rebuffat, S, Beis, K.
登録日2014-03-17
公開日2014-04-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for Hijacking Siderophore Receptors by Antimicrobial Lasso Peptides.
Nat.Chem.Biol., 10, 2014
8PSB
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Three-layered parallel G-quadruplex with snapback loop from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*AP*CP*GP*GP*GP*T)-3')
著者Vianney, Y.M, Schroeder, N, Jana, J, Chojetzki, G, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-25
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
8PSE
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(3+1) hybrid G-quadruplex from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*(BG)P*GP*TP*AP*CP*GP*GP*GP*T)-3')
著者Jana, J, Vianney, Y.M, Schroder, N, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-18
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
2XVA
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Crystal structure of the tellurite detoxification protein TehB from E. coli in complex with sinefungin
分子名称: SINEFUNGIN, TELLURITE RESISTANCE PROTEIN TEHB, ZINC ION
著者Choudhury, H.G, Cameron, A.D, Iwata, S, Beis, K.
登録日2010-10-25
公開日2011-02-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Mechanism of the Chalcogen Detoxifying Protein Tehb from Escherichia Coli.
Biochem.J., 435, 2011
3PEW
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S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEY
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S. cerevisiae Dbp5 bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3HJH
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A rigid N-terminal clamp restrains the motor domains of the bacterial transcription-repair coupling factor
分子名称: COBALT (II) ION, Transcription-repair-coupling factor
著者Murphy, M, Gong, P, Ralto, K, Manelyte, L, Savery, N, Theis, K.
登録日2009-05-21
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献An N-terminal clamp restrains the motor domains of the bacterial transcription-repair coupling factor Mfd.
Nucleic Acids Res., 37, 2009
8A7Z
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NMR structure of holo-acp
分子名称: 4'-PHOSPHOPANTETHEINE, Hybrid polyketide synthase-non ribosomal peptide synthetase
著者Collin, S, Weissman, K.J, Chagot, B, Gruez, A.
登録日2022-06-21
公開日2023-03-22
最終更新日2023-03-29
実験手法SOLUTION NMR
主引用文献Decrypting the programming of beta-methylation in virginiamycin M biosynthesis.
Nat Commun, 14, 2023
7SZI
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BU of 7szi by Molmil
Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae
分子名称: OmpK36, TraN
著者Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H.
登録日2021-11-27
公開日2022-06-08
最終更新日2022-07-13
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mating pair stabilization mediates bacterial conjugation species specificity.
Nat Microbiol, 7, 2022
8ABD
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Solution structure of Phen-DC3 intercalating into a quadruplex-duplex hybrid
分子名称: DNA (36-MER), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
著者Vianney, Y.M, Weisz, K.
登録日2022-07-04
公開日2022-11-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception.
Nucleic Acids Res., 50, 2022
8ABN
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Solution structure of a phenyl-indoloquinoline intercalating into a quadruplex-duplex hybrid
分子名称: DNA (27-MER), diethyl-[3-[[4-(4,5,9-trimethyl-10H-indolo[3,2-b]quinolin-5-ium-11-yl)phenyl]carbonylamino]propyl]azanium
著者Vianney, Y.M, Weisz, K.
登録日2022-07-04
公開日2022-11-16
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception.
Nucleic Acids Res., 50, 2022
6F7L
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Crystal structure of LkcE R326Q mutant in complex with its substrate
分子名称: ACETATE ION, Amine oxidase LkcE, CALCIUM ION, ...
著者Dorival, J, Risser, F, Jacob, C, Collin, S, Drager, G, Kirschning, A, Paris, C, Chagot, B, Gruez, A, Weissman, K.J.
登録日2017-12-11
公開日2018-09-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into a dual function amide oxidase/macrocyclase from lankacidin biosynthesis.
Nat Commun, 9, 2018
8AIG
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NMR structure of holo-acp
分子名称: 4'-PHOSPHOPANTETHEINE, Hybrid non ribosomal peptide synthetase-polyketide synthase
著者Collin, S, Weissman, K.J, Chagot, B, Gruez, A.
登録日2022-07-26
公開日2023-03-22
最終更新日2023-03-29
実験手法SOLUTION NMR
主引用文献Decrypting the programming of beta-methylation in virginiamycin M biosynthesis.
Nat Commun, 14, 2023
8ALL
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BU of 8all by Molmil
NMR structure of holo-acp
分子名称: 4'-PHOSPHOPANTETHEINE, Hybrid non ribosomal peptide synthetase-polyketide synthase
著者Collin, S, Weissman, K.J, Chagot, B, Gruez, A.
登録日2022-08-01
公開日2023-03-22
最終更新日2023-03-29
実験手法SOLUTION NMR
主引用文献Decrypting the programming of beta-methylation in virginiamycin M biosynthesis.
Nat Commun, 14, 2023
6F32
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Crystal structure of a dual function amine oxidase/cyclase in complex with substrate analogues
分子名称: (2~{R},3~{R})-2,3-bis(oxidanyl)-~{N},~{N}'-dipropyl-butanediamide, ACETATE ION, Amine oxidase LkcE, ...
著者Dorival, J, Risser, F, Jacob, C, Collin, S, Drager, G, Kirschning, A, Paris, C, Chagot, B, Gruez, A, Weissman, K.J.
登録日2017-11-27
公開日2018-09-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Insights into a dual function amide oxidase/macrocyclase from lankacidin biosynthesis.
Nat Commun, 9, 2018
1G5H
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CRYSTAL STRUCTURE OF THE ACCESSORY SUBUNIT OF MURINE MITOCHONDRIAL POLYMERASE GAMMA
分子名称: GLYCEROL, MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT, SODIUM ION
著者Carrodeguas, J.A, Theis, K, Bogenhagen, D.F, Kisker, C.
登録日2000-11-01
公開日2001-03-14
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure and deletion analysis show that the accessory subunit of mammalian DNA polymerase gamma, Pol gamma B, functions as a homodimer.
Mol.Cell, 7, 2001
1G5I
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CRYSTAL STRUCTURE OF THE ACCESSORY SUBUNIT OF MURINE MITOCHONDRIAL POLYMERASE GAMMA
分子名称: GLYCEROL, MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT, SODIUM ION
著者Carrodeguas, J.A, Theis, K, Bogenhagen, D.F, Kisker, C.
登録日2000-11-01
公開日2001-03-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and deletion analysis show that the accessory subunit of mammalian DNA polymerase gamma, Pol gamma B, functions as a homodimer.
Mol.Cell, 7, 2001
5EG1
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Antibacterial peptide ABC transporter McjD with a resolved lipid
分子名称: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, MAGNESIUM ION, Microcin-J25 export ATP-binding/permease protein McjD, ...
著者Choudhury, H.G, Beis, K.
登録日2015-10-26
公開日2016-08-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Structural and Functional Basis for Lipid Synergy on the Activity of the Antibacterial Peptide ABC Transporter McjD.
J.Biol.Chem., 291, 2016
5KMW
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TOHO1 Beta lactamase mutant E166A/R274N/R276N -benzyl penicillin complex
分子名称: Beta-lactamase Toho-1, OPEN FORM - PENICILLIN G, PENICILLIN G, ...
著者Coates, L, Langan, P.S, Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Ginell, S.L.
登録日2016-06-27
公開日2017-03-01
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献TOHO1 Beta lactamase mutant E166A/R274N/R276N -benzyl penicillin complex
to be published
7KLB
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X-ray Counterpart to Neutron Structure of Reduced Human MnSOD
分子名称: MANGANESE (II) ION, PHOSPHATE ION, POTASSIUM ION, ...
著者Azadmanesh, J, Lutz, W.E, Coates, L, Weiss, K.L, Borgstahl, G.E.O.
登録日2020-10-29
公開日2021-04-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.
Nat Commun, 12, 2021
1Q52
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Crystal Structure of Mycobacterium tuberculosis MenB, a Key Enzyme in Vitamin K2 Biosynthesis
分子名称: menB
著者Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
登録日2003-08-05
公開日2004-01-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003

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