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PDB: 149 results

3J1R
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BU of 3j1r by Molmil
Filaments from Ignicoccus hospitalis Show Diversity of Packing in Proteins Containing N-terminal Type IV Pilin Helices
Descriptor: archaeal adhesion filament core
Authors:Yu, X, Goforth, C, Meyer, C, Rachel, R, Wirth, R, Schroeder, G.F, Egelman, E.H.
Deposit date:2012-05-18
Release date:2012-06-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Filaments from Ignicoccus hospitalis Show Diversity of Packing in Proteins Containing N-Terminal Type IV Pilin Helices.
J.Mol.Biol., 422, 2012
3J63
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BU of 3j63 by Molmil
Unified assembly mechanism of ASC-dependent inflammasomes
Descriptor: Apoptosis-associated speck-like protein containing a CARD
Authors:Lu, A, Magupalli, V.G, Ruan, J, Yin, Q, Atianand, M.K, Vos, M, Schroder, G.F, Fitzgerald, K.A, Wu, H, Egelman, E.H.
Deposit date:2013-12-05
Release date:2014-03-26
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Unified Polymerization Mechanism for the Assembly of ASC-Dependent Inflammasomes.
Cell(Cambridge,Mass.), 156, 2014
8EXH
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BU of 8exh by Molmil
Agrobacterium tumefaciens Tpilus
Descriptor: (14S,17R)-20-amino-17-hydroxy-11,17-dioxo-12,16,18-trioxa-17lambda~5~-phosphaicosan-14-yl tetradecanoate, Protein virB2
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-10-25
Release date:2023-03-22
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery
Nat Commun, 14, 2023
8FJ5
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BU of 8fj5 by Molmil
Structure of the Haloferax volcanii archaeal type IV pilus
Descriptor: Pilin_N domain-containing protein
Authors:Wang, F, Kreutzberger, M.A, Baquero, D.P, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-19
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FK7
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BU of 8fk7 by Molmil
Structure of the Pyrobaculum calidifontis flagellar-like archaeal type IV pilus
Descriptor: Flagellin
Authors:Wang, F, Kreutzberger, M.A, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-20
Release date:2023-06-28
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FJS
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BU of 8fjs by Molmil
Structure of the Saccharolobus solfataricus archaeal type IV pilus at 3 Angstrom resolution
Descriptor: Pilin_N domain-containing protein
Authors:Kreutzberger, M.A, Wang, F, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-20
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FK0
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BU of 8fk0 by Molmil
Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus
Descriptor: Pilin_N domain-containing protein
Authors:Kreutzberger, M.A, Wang, F, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-20
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FXP
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BU of 8fxp by Molmil
Structure of capsid of Agrobacterium phage Milano
Descriptor: Linking protein 1, gp16, Linking protein 2, ...
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-25
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FXR
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BU of 8fxr by Molmil
Structure of neck with portal vertex of capsid of Agrobacterium phage Milano
Descriptor: Collar sheath protein, gp13, Linking protein 1, ...
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-25
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWB
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BU of 8fwb by Molmil
Portal assembly of Agrobacterium phage Milano
Descriptor: Portal protein, gp7
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-20
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWG
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BU of 8fwg by Molmil
Structure of neck and portal vertex of Agrobacterium phage Milano, C5 symmetry
Descriptor: Collar sheath protein, gp13, Linking protein 1, ...
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-22
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWM
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BU of 8fwm by Molmil
Structure of tail-neck junction of Agrobacterium phage Milano
Descriptor: Collar sheath protein, gp13, Tail sheath protein, ...
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-23
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWC
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BU of 8fwc by Molmil
Collar sheath structure of Agrobacterium phage Milano
Descriptor: Collar sheath protein, gp13
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-20
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWE
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BU of 8fwe by Molmil
Neck structure of Agrobacterium phage Milano, C3 symmetry
Descriptor: Collar sheath protein, gp13, Neck 1 protein, ...
Authors:Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
Deposit date:2023-01-21
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FQC
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BU of 8fqc by Molmil
Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
Descriptor: Baseplate Centerpiece, gp25, Baseplate Central Spike, ...
Authors:Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
Deposit date:2023-01-05
Release date:2024-01-31
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8FOU
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BU of 8fou by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-tube
Descriptor: Virion-associated protein
Authors:Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
Deposit date:2023-01-03
Release date:2024-01-17
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8FOY
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BU of 8foy by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-sheath
Descriptor: Tail sheath protein
Authors:Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
Deposit date:2023-01-03
Release date:2024-01-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8FOP
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BU of 8fop by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano curved tail
Descriptor: Tail sheath protein, Virion-associated protein
Authors:Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
Deposit date:2023-01-03
Release date:2024-01-17
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
7SZI
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BU of 7szi by Molmil
Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae
Descriptor: OmpK36, TraN
Authors:Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H.
Deposit date:2021-11-27
Release date:2022-06-08
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mating pair stabilization mediates bacterial conjugation species specificity.
Nat Microbiol, 7, 2022
7T6E
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BU of 7t6e by Molmil
Cryo-EM of NBD-ffsy filaments (class 1)
Descriptor: NBD-ffsy peptide
Authors:Wang, F, Guo, J, Xu, B, Egelman, E.H.
Deposit date:2021-12-13
Release date:2023-01-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cell spheroid creation by transcytotic intercellular gelation.
Nat Nanotechnol, 18, 2023
7TGG
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BU of 7tgg by Molmil
Cryo-EM structure of PilA-N and PilA-C from Geobacter sulfurreducens
Descriptor: Geopilin domain 1 protein, Geopilin domain 2 protein
Authors:Wang, F, Mustafa, K, Chan, C.H, Joshi, K, Bond, D.R, Hochbaum, A.I, Egelman, E.H.
Deposit date:2022-01-07
Release date:2022-02-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of an extracellular Geobacter OmcE cytochrome filament reveals tetrahaem packing.
Nat Microbiol, 7, 2022
7TFS
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BU of 7tfs by Molmil
Cryo-EM of the OmcE nanowires from Geobacter sulfurreducens
Descriptor: Cytochrome c, HEME C
Authors:Wang, F, Mustafa, K, Chan, C.H, Joshi, K, Hochbaum, A.I, Bond, D.R, Egelman, E.H.
Deposit date:2022-01-07
Release date:2022-05-04
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structure of an extracellular Geobacter OmcE cytochrome filament reveals tetrahaem packing.
Nat Microbiol, 7, 2022
7TXJ
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BU of 7txj by Molmil
Cryo-EM of AFV6
Descriptor: DNA (5'-D(*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*A)-3'), MCP1, MCP2
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2022-02-09
Release date:2022-06-01
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM of AFV6
To Be Published
7TXI
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BU of 7txi by Molmil
Cryo-EM of A. pernix flagellum
Descriptor: Probable flagellin 1
Authors:Wang, F, Cvirkaite-Krupovic, V, Baquero, D.P, Krupovic, M, Egelman, E.H.
Deposit date:2022-02-09
Release date:2022-06-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E5F
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BU of 8e5f by Molmil
Cryo-EM of P. calidifontis cytochrome filament
Descriptor: HEME C, c-type cytochrome
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2022-08-22
Release date:2023-05-10
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Extracellular cytochrome nanowires appear to be ubiquitous in prokaryotes.
Cell, 186, 2023

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PDB entries from 2024-10-30

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