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PDB: 125 results

2YYL
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Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD
Descriptor: 4-hydroxyphenylacetate-3-hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2P5Y
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Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase
Authors:Fu, Z.-Q, Chen, L, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhu, J, Swindell, J.T, Chrzas, J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD
To be Published
2P8T
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Hypothetical protein PH0730 from Pyrococcus horikoshii OT3
Descriptor: Hypothetical protein PH0730
Authors:Chen, L, Zhao, M, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhu, J, Swindell, J.T, Fu, Z.-Q, Chrzas, J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-23
Release date:2007-04-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hypothetical protein PH0730 from Pyrococcus horikoshii OT3
To be Published
2PCL
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BU of 2pcl by Molmil
Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5
Descriptor: 1,2-ETHANEDIOL, Lipoprotein-releasing system ATP-binding protein lolD, MAGNESIUM ION, ...
Authors:Jeyakanthan, J, Kanaujia, S.P, Rafi, Z.A, Sekar, K, Ebihara, A, Nakagawa, N, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5
To be Published
2PH3
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Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus
Descriptor: 3-oxoacyl-[acyl carrier protein] reductase
Authors:Swindell II, J.T, Chen, L, Zhu, J, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Fu, Z.-Q, Chrzas, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-10
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus
To be Published
2CWW
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BU of 2cww by Molmil
Crystal structure of Thermus thermophilus TTHA1280, a putative SAM-dependent RNA methyltransferase, in complex with S-adenosyl-L-homocysteine
Descriptor: ACETIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Pioszak, A.A, Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine.
Acta Crystallogr.,Sect.F, 61, 2005
2YYJ
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BU of 2yyj by Molmil
Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase complexed with FAD and 4-hydroxyphenylacetate
Descriptor: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylacetate-3-hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2ZBT
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BU of 2zbt by Molmil
Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Pyridoxal biosynthesis lyase pdxS
Authors:Manzoku, M, Ebihara, A, Fujimoto, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-29
Release date:2007-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8
To be Published
2OMD
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BU of 2omd by Molmil
Crystal structure of molybdopterin converting factor subunit 2 (aq_2181) from aquifex aeolicus VF5
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-22
Release date:2008-01-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of molybdopterin converting factor subunit 2 (aq_2181) from aquifex aeolicus VF5
To be Published
3AV3
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BU of 3av3 by Molmil
Crystal structure of glycinamide ribonucleotide transformylase 1 from Geobacillus kaustophilus
Descriptor: MAGNESIUM ION, Phosphoribosylglycinamide formyltransferase
Authors:Kanagawa, M, Baba, S, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-02-18
Release date:2012-03-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures and reaction mechanisms of the two related enzymes, PurN and PurU.
J.Biochem., 154, 2013
2PCN
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BU of 2pcn by Molmil
Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426
Descriptor: ACETATE ION, S-adenosylmethionine:2-demethylmenaquinone methyltransferase
Authors:Jeyakanthan, J, Kanaujia, S.P, Rafi, Z.A, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of S-adenosylmethionine:2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426
To be Published
3AW8
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BU of 3aw8 by Molmil
Crystal structure of N5-carboxyaminoimidazole ribonucleotide synthetase from Thermus thermophilus HB8
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Phosphoribosylaminoimidazole carboxylase, ...
Authors:Okada, K, Tsunoda, S, Taka, H, Baba, S, Kanagawa, M, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-03-15
Release date:2012-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of N5-carboxyaminoimidazole ribonucleotide synthetase, PurK, from thermophilic bacteria
To be Published
2PE3
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BU of 2pe3 by Molmil
Crystal structure of Frv operon protein FRVX (PH1821)from pyrococcus horikoshii OT3
Descriptor: 354aa long hypothetical operon protein Frv
Authors:Jeyakanthan, J, Kanaujia, S.P, Rafi, Z.A, Sekar, K, Inagakai, E, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of frv operon protein frvx (ph1821)from pyrococcus horikoshii OT3
To be Published
2PT5
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BU of 2pt5 by Molmil
Crystal Structure Of Shikimate Kinase (aq_2177) From Aquifex Aeolicus vf5
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Shikimate kinase
Authors:Jeyakanthan, J, Nithya, N, Shimada, A, Velmurugan, D, Ebihara, A, Shinkai, A, Kuramitsu, S, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure Of Shikimate Kinase (aq_2177) From Aquifex Aeolicus vf5
To be Published
2YYS
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BU of 2yys by Molmil
Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
Descriptor: GLYCEROL, Proline iminopeptidase-related protein
Authors:Okai, M, Miyauchi, Y, Ebihara, A, Lee, W.C, Nagata, K, Tanokura, M.
Deposit date:2007-05-01
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
Proteins, 70, 2008
2YZR
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BU of 2yzr by Molmil
Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii
Descriptor: CHLORIDE ION, Pyridoxal biosynthesis lyase pdxS
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii
to be published
2ZO4
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BU of 2zo4 by Molmil
Crystal structure of metallo-beta-lactamase family protein TTHA1429 from Thermus thermophilus HB8
Descriptor: Metallo-beta-lactamase family protein, ZINC ION
Authors:Yamamura, A, Nagata, K, Agari, Y, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, Tanokura, M.
Deposit date:2008-05-05
Release date:2009-03-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TTHA1429, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8.
Proteins, 73, 2008
2ZDJ
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BU of 2zdj by Molmil
Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
Descriptor: hypothetical protein TTMA177
Authors:Agari, Y, Tamakoshi, M, Yamagishi, A, Shinkai, A, Ebihara, A, Yokoyama, S, Kuramitsu, S, Oshima, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-26
Release date:2008-12-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
To be Published
2YQY
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BU of 2yqy by Molmil
Crystal structure of TT2238, a four-helix bundle protein
Descriptor: Hypothetical protein TTHA0303
Authors:Nagata, K, Ohtsuka, J, Iino, H, Ebihara, A, Yokoyama, S, Kuramitsu, S, Tanokura, M.
Deposit date:2007-03-31
Release date:2008-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of TTHA0303 (TT2238), a four-helix bundle protein with an exposed histidine triad from Thermus thermophilus HB8 at 2.0 A
Proteins, 70, 2008
2ZWR
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Crystal structure of TTHA1623 from thermus thermophilus HB8
Descriptor: Metallo-beta-lactamase superfamily protein, ZINC ION
Authors:Yamamura, A, Okada, A, Kameda, Y, Ohtsuka, J, Nakagawa, N, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2008-12-17
Release date:2009-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 65, 2009
2ZZI
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BU of 2zzi by Molmil
Crystal structure of TTHA1623 in a di-iron-bound form
Descriptor: ACETATE ION, FE (III) ION, Metallo-beta-lactamase superfamily protein
Authors:Yamamura, A, Okada, A, Kameda, Y, Ohtsuka, J, Nakagawa, N, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2009-02-16
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 65, 2009
2CB1
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BU of 2cb1 by Molmil
Crystal Structure of O-actetyl Homoserine Sulfhydrylase From Thermus Thermophilus HB8,OAH2.
Descriptor: O-ACETYL HOMOSERINE SULFHYDRYLASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Imagawa, T, Utsunomiya, H, Tsuge, H, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S.
Deposit date:2005-12-28
Release date:2007-01-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of O-Acetyl Homoserine Sulfhydrylase
To be Published
2GS9
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BU of 2gs9 by Molmil
Crystal structure of TT1324 from Thermus thermophilis HB8
Descriptor: FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-25
Release date:2007-03-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
2YYB
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BU of 2yyb by Molmil
Crystal structure of TTHA1606 from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA1606
Authors:Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-28
Release date:2008-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Proteins, 76, 2009
2YSW
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BU of 2ysw by Molmil
Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5
Descriptor: 3-dehydroquinate dehydratase
Authors:Tanaka, T, Kumarevel, T.S, Ebihara, A, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-04
Release date:2007-10-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5
To be Published

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