Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 357 results

3QVA
DownloadVisualize
BU of 3qva by Molmil
Structure of Klebsiella pneumoniae 5-hydroxyisourate hydrolase
Descriptor: PHOSPHATE ION, Transthyretin-like protein
Authors:French, J.B, Ealick, S.E.
Deposit date:2011-02-25
Release date:2011-08-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:Structural and kinetic insights into the mechanism of 5-hydroxyisourate hydrolase from Klebsiella pneumoniae.
Acta Crystallogr.,Sect.D, 67, 2011
3QVL
DownloadVisualize
BU of 3qvl by Molmil
Allantoin racemase from Klebsiella pneumoniae
Descriptor: Putative hydantoin racemase, [(4R)-2,5-dioxoimidazolidin-4-yl]acetic acid
Authors:French, J.B, Neau, D.B, Ealick, S.E.
Deposit date:2011-02-25
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Characterization of the Structure and Function of Klebsiella pneumoniae Allantoin Racemase.
J.Mol.Biol., 410, 2011
1S2I
DownloadVisualize
BU of 1s2i by Molmil
Purine 2'deoxyribosyltransferase + bromopurine
Descriptor: 6-BROMO-7H-PURINE, purine trans deoxyribosylase
Authors:Anand, R, Kaminski, P.A, Ealick, S.E.
Deposit date:2004-01-08
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Biochemistry, 43, 2004
3QVJ
DownloadVisualize
BU of 3qvj by Molmil
Allantoin racemase from Klebsiella pneumoniae
Descriptor: CHLORIDE ION, Putative hydantoin racemase
Authors:French, J.B, Neau, D.B, Ealick, S.E.
Deposit date:2011-02-25
Release date:2011-05-04
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of the Structure and Function of Klebsiella pneumoniae Allantoin Racemase.
J.Mol.Biol., 410, 2011
3QW3
DownloadVisualize
BU of 3qw3 by Molmil
Structure of Leishmania donovani OMP decarboxylase
Descriptor: Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (Ompdcase-oprtase, putative), ...
Authors:French, J.B, Ealick, S.E.
Deposit date:2011-02-26
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Leishmania donovani UMP synthase is essential for promastigote viability and has an unusual tetrameric structure that exhibits substrate-controlled oligomerization.
J.Biol.Chem., 286, 2011
3QVK
DownloadVisualize
BU of 3qvk by Molmil
Allantoin racemase from Klebsiella pneumoniae
Descriptor: 1-(2,5-DIOXO-2,5-DIHYDRO-1H-IMIDAZOL-4-YL)UREA, Putative hydantoin racemase
Authors:French, J.B, Neau, D.B, Ealick, S.E.
Deposit date:2011-02-25
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Characterization of the Structure and Function of Klebsiella pneumoniae Allantoin Racemase.
J.Mol.Biol., 410, 2011
3QW4
DownloadVisualize
BU of 3qw4 by Molmil
Structure of Leishmania donovani UMP synthase
Descriptor: CHLORIDE ION, UMP synthase, URIDINE-5'-MONOPHOSPHATE
Authors:French, J.B, Ealick, S.E.
Deposit date:2011-02-26
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Leishmania donovani UMP synthase is essential for promastigote viability and has an unusual tetrameric structure that exhibits substrate-controlled oligomerization.
J.Biol.Chem., 286, 2011
3RM5
DownloadVisualize
BU of 3rm5 by Molmil
Structure of Trifunctional THI20 from Yeast
Descriptor: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20, SULFATE ION
Authors:French, J.B, Begley, T.P, Ealick, S.E.
Deposit date:2011-04-20
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure of trifunctional THI20 from yeast.
Acta Crystallogr.,Sect.D, 67, 2011
1S2D
DownloadVisualize
BU of 1s2d by Molmil
Purine 2'-Deoxyribosyl complex with arabinoside: Ribosylated Intermediate (AraA)
Descriptor: 2-deoxy-2-fluoro-alpha-D-arabinofuranose, ADENINE, Nucleoside 2-deoxyribosyltransferase
Authors:Anand, R, Kaminski, P.A, Ealick, S.E.
Deposit date:2004-01-08
Release date:2004-03-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Biochemistry, 43, 2004
1S3F
DownloadVisualize
BU of 1s3f by Molmil
Purine 2'-deoxyribosyltransferase + selenoinosine
Descriptor: 9-(3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YL)-1,9-DIHYDRO-PURINE-6-THIONE, purine trans deoxyribosylase
Authors:Anand, R, Kaminski, P.A, Ealick, S.E.
Deposit date:2004-01-13
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Biochemistry, 43, 2004
3RI6
DownloadVisualize
BU of 3ri6 by Molmil
A Novel Mechanism of Sulfur Transfer Catalyzed by O-Acetylhomoserine Sulfhydrylase in Methionine Biosynthetic Pathway of Wolinella succinogenes
Descriptor: O-ACETYLHOMOSERINE SULFHYDRYLASE
Authors:Tran, T.H, Krishnamoorthy, K, Begley, T.P, Ealick, S.E.
Deposit date:2011-04-13
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A novel mechanism of sulfur transfer catalyzed by O-acetylhomoserine sulfhydrylase in the methionine-biosynthetic pathway of Wolinella succinogenes.
Acta Crystallogr.,Sect.D, 67, 2011
3RW9
DownloadVisualize
BU of 3rw9 by Molmil
Crystal Structure of human Spermidine Synthase in Complex with decarboxylated S-adenosylhomocysteine
Descriptor: 5'-S-(3-aminopropyl)-5'-thioadenosine, Spermidine synthase
Authors:Seckute, J, McCloskey, D.E, Thomas, H.J, Secrist III, J.A, Pegg, A.E, Ealick, S.E.
Deposit date:2011-05-08
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding and inhibition of human spermidine synthase by decarboxylated S-adenosylhomocysteine.
Protein Sci., 20, 2011
3H0W
DownloadVisualize
BU of 3h0w by Molmil
Human AdoMetDC with 5'-Deoxy-5'-[(N-dimethyl)amino]-8-methyl-adenosine
Descriptor: 1,4-DIAMINOBUTANE, 5'-deoxy-5'-(dimethylamino)-8-methyladenosine, PYRUVIC ACID, ...
Authors:Bale, S, Brooks, W.H, Hanes, J.W, Mahesan, A.M, Guida, W.C, Ealick, S.E.
Deposit date:2009-04-10
Release date:2009-06-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Role of the sulfonium center in determining the ligand specificity of human s-adenosylmethionine decarboxylase.
Biochemistry, 48, 2009
3H0V
DownloadVisualize
BU of 3h0v by Molmil
Human AdoMetDC with 5'-Deoxy-5'-(dimethylsulfonio) adenosine
Descriptor: 1,4-DIAMINOBUTANE, 5'-deoxy-5'-(dimethyl-lambda~4~-sulfanyl)adenosine, PYRUVIC ACID, ...
Authors:Bale, S, Brooks, W.H, Hanes, J.W, Mahesan, A.M, Guida, W.C, Ealick, S.E.
Deposit date:2009-04-10
Release date:2009-06-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Role of the sulfonium center in determining the ligand specificity of human s-adenosylmethionine decarboxylase.
Biochemistry, 48, 2009
3GMC
DownloadVisualize
BU of 3gmc by Molmil
Crystal Structure of 2-Methyl-3-hydroxypyridine-5-carboxylic acid Oxygenase with substrate bound
Descriptor: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-hydroxy-6-methylpyridine-3-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE
Authors:McCulloch, K.M, Mukherjee, T, Begley, T.P, Ealick, S.E.
Deposit date:2009-03-13
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the PLP degradative enzyme 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti MAFF303099 and its mechanistic implications.
Biochemistry, 48, 2009
3GMB
DownloadVisualize
BU of 3gmb by Molmil
Crystal Structure of 2-Methyl-3-hydroxypyridine-5-carboxylic acid Oxygenase
Descriptor: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:McCulloch, K.M, Mukherjee, T, Begley, T.P, Ealick, S.E.
Deposit date:2009-03-13
Release date:2009-04-14
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the PLP degradative enzyme 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti MAFF303099 and its mechanistic implications.
Biochemistry, 48, 2009
1J58
DownloadVisualize
BU of 1j58 by Molmil
Crystal Structure of Oxalate Decarboxylase
Descriptor: FORMIC ACID, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Anand, R, Dorrestein, P.C, Kinsland, C, Begley, T.P, Ealick, S.E.
Deposit date:2002-02-25
Release date:2002-07-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of oxalate decarboxylase from Bacillus subtilis at 1.75 A resolution.
Biochemistry, 41, 2002
1JEN
DownloadVisualize
BU of 1jen by Molmil
HUMAN S-ADENOSYLMETHIONINE DECARBOXYLASE
Descriptor: PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (ALPHA CHAIN)), PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (BETA CHAIN))
Authors:Ekstrom, J.L, Mathews, I.I, Stanley, B.A, Pegg, A.E, Ealick, S.E.
Deposit date:1999-02-23
Release date:1999-06-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of human S-adenosylmethionine decarboxylase at 2.25 A resolution reveals a novel fold.
Structure Fold.Des., 7, 1999
1JXH
DownloadVisualize
BU of 1jxh by Molmil
4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium
Descriptor: PHOSPHOMETHYLPYRIMIDINE KINASE, SULFATE ION
Authors:Cheng, G, Bennett, E.M, Begley, T.P, Ealick, S.E.
Deposit date:2001-09-07
Release date:2002-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase from Salmonella typhimurium at 2.3 A resolution.
Structure, 10, 2002
1JXI
DownloadVisualize
BU of 1jxi by Molmil
4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium complexed with 4-Amino-5-hydroxymethyl-2-methylpyrimidine
Descriptor: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, PHOSPHOMETHYLPYRIMIDINE KINASE, SULFATE ION
Authors:Cheng, G, Bennett, E.M, Begley, T.P, Ealick, S.E.
Deposit date:2001-09-07
Release date:2002-02-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase from Salmonella typhimurium at 2.3 A resolution.
Structure, 10, 2002
1K3F
DownloadVisualize
BU of 1k3f by Molmil
Uridine Phosphorylase from E. coli, Refined in the Monoclinic Crystal Lattice
Descriptor: uridine phosphorylase
Authors:Morgunova, E.Yu, Mikhailov, A.M, Popov, A.N, Blagova, E.V, Smirnova, E.A, Vainshtein, B.K, Mao, C, Armstrong, S.R, Ealick, S.E, Komissarov, A.A, Linkova, E.V, Burlakova, A.A, Mironov, A.S, Debabov, V.G.
Deposit date:2001-10-02
Release date:2001-10-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Atomic structure at 2.5 A resolution of uridine phosphorylase from E. coli as refined in the monoclinic crystal lattice.
FEBS Lett., 367, 1995
1LIK
DownloadVisualize
BU of 1lik by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE
Descriptor: ADENOSINE, CHLORIDE ION, SULFATE ION, ...
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LIJ
DownloadVisualize
BU of 1lij by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO PRODRUG 2 7-IODOTUBERCIDIN AND AMP-PCP
Descriptor: 2-RIBOFURANOSYL-3-IODO-2,3-DIHYDRO-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LII
DownloadVisualize
BU of 1lii by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE 2 AND AMP-PCP
Descriptor: ADENOSINE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LIO
DownloadVisualize
BU of 1lio by Molmil
STRUCTURE OF APO T. GONDII ADENOSINE KINASE
Descriptor: adenosine kinase
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-06-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000

220760

数据于2024-06-05公开中

PDB statisticsPDBj update infoContact PDBjnumon