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PDB: 98 results

1E83
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BU of 1e83 by Molmil
Cytochrome c' from Alcaligenes xylosoxidans - oxidized structure
Descriptor: CYTOCHROME C', HEME C
Authors:Lawson, D.M, Stevenson, C.E.M, Andrew, C.R, Eady, R.R.
Deposit date:2000-09-15
Release date:2000-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Unprecedented Proximal Binding of Nitric Oxide to Heme: Implications for Guanylate Cyclase
Embo J., 19, 2000
8BGW
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BU of 8bgw by Molmil
CryoEM structure of quinol-dependent Nitric Oxide Reductase (qNOR) from Alcaligenes xylosoxidans at 2.2 A resolution
Descriptor: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, CALCIUM ION, FE (III) ION, ...
Authors:Flynn, A, Antonyuk, S.V, Eady, R.R, Muench, S.P, Hasnain, S.S.
Deposit date:2022-10-28
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:A 2.2 angstrom cryoEM structure of a quinol-dependent NO Reductase shows close similarity to respiratory oxidases.
Nat Commun, 14, 2023
2YLI
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BU of 2yli by Molmil
RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS IN ITS FERROUS FORM AT 1.45 A
Descriptor: CYTOCHROME C', HEME C
Authors:Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
Deposit date:2011-06-02
Release date:2012-04-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
2YL1
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BU of 2yl1 by Molmil
CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND L16A VARIANT AT 1.03 A RESOLUTION - Restraint refinement
Descriptor: CARBON MONOXIDE, CYTOCHROME C', HEME C
Authors:Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
Deposit date:2011-05-30
Release date:2011-10-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
2YQB
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BU of 2yqb by Molmil
Structure of P93A variant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii at 1.4 A resolution
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C
Authors:Antonyuk, S.V, Han, C, Eady, R.R, Hasnain, S.S.
Deposit date:2012-11-07
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structures of protein-protein complexes involved in electron transfer.
Nature, 496, 2013
1DYZ
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BU of 1dyz by Molmil
OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS
Descriptor: AZURIN II, COPPER (II) ION
Authors:Dodd, F.E, Abraham, Z.H.L, Eady, R.R, Hasnain, S.S.
Deposit date:2000-02-11
Release date:2000-07-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of Oxidised and Reduced Azurin II from Alcaligenes Xylosoxidans at 1.75 Angstoms Resolution
Acta Crystallogr.,Sect.D, 56, 2000
1DZ0
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BU of 1dz0 by Molmil
REDUCED AZURIN II FROM ALCALIGENES XYLOSOXIDANS
Descriptor: AZURIN II, COPPER (I) ION
Authors:Dodd, F.E, Abraham, Z.H.L, Eady, R.R, Hasnain, S.S.
Deposit date:2000-02-11
Release date:2000-07-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of Oxidised and Reduced Azurin II from Alcaligenes Xylosoxidans at 1.75 Angstoms Resolution
Acta Crystallogr.,Sect.D, 56, 2000
7QXK
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BU of 7qxk by Molmil
As isolated MSOX movie series dataset 1 (0.4 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
Deposit date:2022-01-26
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
7QYC
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As isolated MSOX movie series dataset 20 (8 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
Deposit date:2022-01-27
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
7QY4
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As isolated MSOX movie series dataset 5 (2 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
Deposit date:2022-01-27
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
1WA1
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Crystal Structure Of H313Q Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, ...
Authors:Barrett, M.L, Harris, R.L, Antonyuk, S.V, Strange, R.W, Hough, M.A, Eady, R.R, Sawers, G, Hasnain, S.S.
Deposit date:2004-10-22
Release date:2005-01-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insights Into Redox Partner Interactions and Substrate Binding in Nitrite Reductase from Alcaligenes Xylosoxidans: Crystal Structures of the Trp138His and His313Gln Mutants
Biochemistry, 43, 2004
1WAE
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BU of 1wae by Molmil
Crystal structure of H129V Mutant of Alcaligenes Xylosoxidans Nitrite Reductase
Descriptor: COPPER (II) ION, DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, ZINC ION
Authors:Ellis, M.J, Antonyuk, S.V, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2004-10-26
Release date:2004-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Observation of an Unprecedented Cu Bis-His Site: Crystal Structure of the H129V Mutant of Nitrite Reductase
Inorg.Chem., 43, 2004
1WA0
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BU of 1wa0 by Molmil
Crystal Structure Of W138H Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, ...
Authors:Barrett, M.L, Harris, R.L, Antonyuk, S.V, Strange, R.W, Hough, M.A, Eady, R.R, Sawers, G, Hasnain, S.S.
Deposit date:2004-10-22
Release date:2005-01-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Insights Into Redox Partner Interactions and Substrate Binding in Nitrite Reductase from Alcaligenes Xylosoxidans: Crystal Structures of the Trp138His and His313Gln Mutants
Biochemistry, 43, 2004
1WA2
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BU of 1wa2 by Molmil
Crystal Structure Of H313Q Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase with nitrite bound
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE,, ...
Authors:Barrett, M.L, Harris, R.L, Antonyuk, S.V, Strange, R.W, Hough, M.A, Eady, R.R, Sawers, G, Hasnain, S.S.
Deposit date:2004-10-22
Release date:2005-01-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Insights Into Redox Partner Interactions and Substrate Binding in Nitrite Reductase from Alcaligenes Xylosoxidans: Crystal Structures of the Trp138His and His313Gln Mutants
Biochemistry, 43, 2004
2JFC
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BU of 2jfc by Molmil
M144L mutant of Nitrite Reductase from Alcaligenes xylosoxidans in space group P212121
Descriptor: CHLORIDE ION, COPPER (II) ION, DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE
Authors:Paraskevopoulos, K, Hough, M.A, Sawers, R.G, Eady, R.R, Hasnain, S.S.
Deposit date:2007-01-31
Release date:2007-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structure of the met144Leu Mutant of Copper Nitrite Reductase from Alcaligenes Xylosoxidans Provides the First Glimpse of a Protein-Protein Complex with Azurin II.
J.Biol.Inorg.Chem., 12, 2007
2IWK
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BU of 2iwk by Molmil
Inhibitor-bound form of nitrous oxide reductase from Achromobacter Cycloclastes at 1.7 Angstrom resolution
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Paraskevopoulos, K, Antonyuk, S.V, Sawers, R.G, Eady, R.R, Hasnain, S.S.
Deposit date:2006-06-30
Release date:2006-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insight Into Catalysis of Nitrous Oxide Reductase from High-Resolution Structures of Resting and Inhibitor-Bound Enzyme from Achromobacter Cycloclastes.
J.Mol.Biol., 362, 2006
2IWF
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BU of 2iwf by Molmil
Resting form of pink nitrous oxide reductase from Achromobacter Cycloclastes
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Paraskevopoulos, K, Antonyuk, S.V, Sawers, R.G, Eady, R.R, Hasnain, S.S.
Deposit date:2006-06-29
Release date:2006-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Insight Into Catalysis of Nitrous Oxide Reductase from High-Resolution Structures of Resting and Inhibitor-Bound Enzyme from Achromobacter Cycloclastes.
J.Mol.Biol., 362, 2006
1E84
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BU of 1e84 by Molmil
Cytochrome c' from Alcaligenes xylosoxidans - reduced structure
Descriptor: CYTOCHROME C', HEME C
Authors:Lawson, D.M, Stevenson, C.E.M, Andrew, C.R, Eady, R.R.
Deposit date:2000-09-15
Release date:2000-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unprecedented Proximal Binding of Nitric Oxide to Heme: Implications for Guanylate Cyclase
Embo J., 19, 2000
1E86
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BU of 1e86 by Molmil
Cytochrome c' from Alcaligenes xylosoxidans - reduced structure with CO bound to distal side of heme
Descriptor: CARBON MONOXIDE, CYTOCHROME C', HEME C
Authors:Lawson, D.M, Stevenson, C.E.M, Andrew, C.R, Eady, R.R.
Deposit date:2000-09-15
Release date:2000-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unprecedented Proximal Binding of Nitric Oxide to Heme: Implications for Guanylate Cyclase
Embo J., 19, 2000
6TFD
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BU of 6tfd by Molmil
Crystal structure of nitrite and NO bound three-domain copper-containing nitrite reductase from Hyphomicrobium denitrificans strain 1NES1
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, NITRIC OXIDE, ...
Authors:Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-11-13
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of substrate- and product-bound forms of a multi-domain copper nitrite reductase shed light on the role of domain tethering in protein complexes.
Iucrj, 7, 2020
6TFO
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BU of 6tfo by Molmil
Crystal structure of as isolated three-domain copper-containing nitrite reductase from Hyphomicrobium denitrificans strain 1NES1
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-11-14
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of substrate- and product-bound forms of a multi-domain copper nitrite reductase shed light on the role of domain tethering in protein complexes.
Iucrj, 7, 2020
6THE
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BU of 6the by Molmil
Crystal structure of core domain of four-domain heme-cupredoxin-Cu nitrite reductase from Bradyrhizobium sp. ORS 375
Descriptor: CHLORIDE ION, COPPER (II) ION, Copper-containing nitrite reductase, ...
Authors:Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-11-20
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction.
Febs J., 288, 2021
6THF
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BU of 6thf by Molmil
Crystal structure of two-domain Cu nitrite reductase from Bradyrhizobium sp. ORS 375
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Copper-containing nitrite reductase, ...
Authors:Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-11-20
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction.
Febs J., 288, 2021
1NDT
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BU of 1ndt by Molmil
NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS
Descriptor: CHLORIDE ION, COPPER (II) ION, PROTEIN (NITRITE REDUCTASE)
Authors:Dodd, F.E, Vanbeeumen, J, Eady, R.R, Hasnain, S.S.
Deposit date:1998-10-28
Release date:1998-11-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of a blue-copper nitrite reductase in two crystal forms. The nature of the copper sites, mode of substrate binding and recognition by redox partner.
J.Mol.Biol., 282, 1998
7ZCS
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BU of 7zcs by Molmil
Nitrite-bound MSOX movie series dataset 65 (52 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - water ligand (final)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
Deposit date:2022-03-28
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022

 

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