Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 428 results

1Z0C
DownloadVisualize
BU of 1z0c by Molmil
Crystal Structure of A. fulgidus Lon proteolytic domain D508A mutant
Descriptor: Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-01
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
3OZ5
DownloadVisualize
BU of 3oz5 by Molmil
S-Methyl Carbocyclic LNA
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(UMX)P*AP*CP*GP*C)-3'), SPERMINE
Authors:Seth, P.R, Allerson, C.A, Berdeja, A, Siwkowski, A, Pallan, P.S, Gaus, H, Prakash, T.P, Watt, A.T, Egli, M, Swayze, E.E.
Deposit date:2010-09-24
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:An exocyclic methylene group acts as a bioisostere of the 2'-oxygen atom in LNA.
J.Am.Chem.Soc., 132, 2010
2OHO
DownloadVisualize
BU of 2oho by Molmil
Structural Basis for Glutamate Racemase Inhibitor
Descriptor: Glutamate Racemase, SULFATE ION
Authors:Kim, E.E.
Deposit date:2007-01-10
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for glutamate racemase inhibition
J.Mol.Biol., 372, 2007
3RUK
DownloadVisualize
BU of 3ruk by Molmil
Human Cytochrome P450 CYP17A1 in complex with Abiraterone
Descriptor: Abiraterone, PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase
Authors:DeVore, N.M, Scott, E.E.
Deposit date:2011-05-05
Release date:2012-01-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of cytochrome P450 17A1 with prostate cancer drugs abiraterone and TOK-001.
Nature, 482, 2012
2ACG
DownloadVisualize
BU of 2acg by Molmil
ACANTHAMOEBA CASTELLANII PROFILIN II
Descriptor: PROFILIN II
Authors:Fedorov, A.A, Magnus, K.A, Graupe, M.H, Lattman, E.E, Pollard, T.D, Almo, S.C.
Deposit date:1994-08-30
Release date:1994-11-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structures of isoforms of the actin-binding protein profilin that differ in their affinity for phosphatidylinositol phosphates.
Proc.Natl.Acad.Sci.USA, 91, 1994
2KTZ
DownloadVisualize
BU of 2ktz by Molmil
Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA
Descriptor: (7R)-7-[(dimethylamino)methyl]-1-[3-(dimethylamino)propyl]-7,8-dihydro-1H-furo[3,2-e]benzimidazol-2-amine, HCV IRES Domain IIa RNA
Authors:Paulsen, R.B, Seth, P.P, Swayze, E.E, Griffey, R.H, Skalicky, J.J, Cheatham III, T.E, Davis, D.R.
Deposit date:2010-02-10
Release date:2010-04-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Inhibitor-induced structural change in the HCV IRES domain IIa RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
2K6T
DownloadVisualize
BU of 2k6t by Molmil
Solution structure of the relaxin-like factor
Descriptor: Insulin-like 3 A chain, Insulin-like 3 B chain
Authors:Bullesbach, E.E, Hass, M.A.S, Jensen, M.R, Hansen, D.F, Kristensen, S.M, Schwabe, C, Led, J.J.
Deposit date:2008-07-23
Release date:2008-12-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of a conformationally restricted fully active derivative of the human relaxin-like factor
Biochemistry, 47, 2008
2AID
DownloadVisualize
BU of 2aid by Molmil
STRUCTURE OF A NON-PEPTIDE INHIBITOR COMPLEXED WITH HIV-1 PROTEASE: DEVELOPING A CYCLE OF STRUCTURE-BASED DRUG DESIGN
Descriptor: 4-(4-CHLORO-PHENYL)-1-{3-[2-(4-FLUORO-PHENYL)-[1,3]DITHIOLAN-2-YL]-PROPYL}-PIPERIDIN-4-OL, CHLORIDE ION, HUMAN IMMUNODEFICIENCY VIRUS PROTEASE
Authors:Rutenber, E.E, Fauman, E.B, Keenan, R.J, Stroud, R.M.
Deposit date:1997-04-17
Release date:1997-10-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a non-peptide inhibitor complexed with HIV-1 protease. Developing a cycle of structure-based drug design.
J.Biol.Chem., 268, 1993
2OHV
DownloadVisualize
BU of 2ohv by Molmil
Structural Basis for Glutamate Racemase Inhibition
Descriptor: (4S)-4-(2-NAPHTHYLMETHYL)-D-GLUTAMIC ACID, Glutamate Racemase
Authors:Kim, E.E.
Deposit date:2007-01-10
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for glutamate racemase inhibition
J.Mol.Biol., 372, 2007
2OEO
DownloadVisualize
BU of 2oeo by Molmil
Cryogenic crystal structure of Staphylococcal Nuclease variant truncated Delta+PHS I92D
Descriptor: CALCIUM ION, Staphylococcal thermonuclease, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Reynald, R.L, Lattman, E.E, Gittis, A.G.
Deposit date:2006-12-30
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Buried Charges and Water in the Protein Interior: Reality or Fiction?
To be Published
2OKL
DownloadVisualize
BU of 2okl by Molmil
Crystal structure of Peptide Deformylase 2 with actinonin from Bacillus cereus
Descriptor: ACTINONIN, CITRIC ACID, Peptide deformylase 2, ...
Authors:Kim, E.E.
Deposit date:2007-01-17
Release date:2008-01-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characterization of Peptide Deformylase2 from B. cereus
J.Biochem.Mol.Biol., 40, 2007
2OHG
DownloadVisualize
BU of 2ohg by Molmil
Structural Basis for Glutamte Racemase Inhibition
Descriptor: Glutamate racemase
Authors:Kim, E.E.
Deposit date:2007-01-10
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for glutamate racemase inhibition
J.Mol.Biol., 372, 2007
7ZOL
DownloadVisualize
BU of 7zol by Molmil
Cryo-EM structure of a CRISPR effector in complex with regulator
Descriptor: Cas7-11, TPR-CHAT, ZINC ION, ...
Authors:Babatunde, E.E, Davide, T, Bertrand, B, Sergey, N, Alexander, M, Henning, S, Dong, C.N.
Deposit date:2022-04-26
Release date:2022-11-30
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural insights into the regulation of Cas7-11 by TPR-CHAT.
Nat.Struct.Mol.Biol., 30, 2023
7ZOQ
DownloadVisualize
BU of 7zoq by Molmil
Cryo-EM structure of a CRISPR effector in complex with a caspase regulator
Descriptor: RNA (39-MER), TPR-CHAT, ZINC ION, ...
Authors:Babatunde, E.E, Davide, T, Bertrand, B, Sergey, N, Alexander, M, Henning, S, Dong, C.N.
Deposit date:2022-04-26
Release date:2022-11-30
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the regulation of Cas7-11 by TPR-CHAT.
Nat.Struct.Mol.Biol., 30, 2023
8ADW
DownloadVisualize
BU of 8adw by Molmil
Lipidic alpha-synuclein fibril - polymorph L1C
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-07-11
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8ANW
DownloadVisualize
BU of 8anw by Molmil
Poliovirus type 3 (strain Saukett) stabilised virus-like particle (PV3 SC8).
Descriptor: Capsid protein, VP0, VP1, ...
Authors:Bahar, M.W, Fry, E.E, Stuart, D.I.
Deposit date:2022-08-06
Release date:2022-10-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Production and Characterisation of Stabilised PV-3 Virus-like Particles Using Pichia pastoris .
Viruses, 14, 2022
8ADU
DownloadVisualize
BU of 8adu by Molmil
Lipidic alpha-synuclein fibril - polymorph L1A
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-07-11
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8AEX
DownloadVisualize
BU of 8aex by Molmil
Lipidic alpha-synuclein fibril - polymorph L3A
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-07-14
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8ADV
DownloadVisualize
BU of 8adv by Molmil
Lipidic alpha-synuclein fibril - polymorph L1B
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-07-11
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8ADS
DownloadVisualize
BU of 8ads by Molmil
Lipidic alpha-synuclein fibril - polymorph L2B
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-07-11
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8AYY
DownloadVisualize
BU of 8ayy by Molmil
Poliovirus type 3 (strain Saukett) stabilised virus-like particle (PV3 SC8) in complex with GSH and Pleconaril
Descriptor: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, Capsid protein, VP0, ...
Authors:Bahar, M.W, Fry, E.E, Stuart, D.I.
Deposit date:2022-09-04
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:A conserved glutathione binding site in poliovirus is a target for antivirals and vaccine stabilisation.
Commun Biol, 5, 2022
8AYX
DownloadVisualize
BU of 8ayx by Molmil
Poliovirus type 3 (strain Saukett) stabilised virus-like particle (PV3 SC8) in complex with GSH and GPP3
Descriptor: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, Capsid protein, VP0, ...
Authors:Bahar, M.W, Fry, E.E, Stuart, D.I.
Deposit date:2022-09-04
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A conserved glutathione binding site in poliovirus is a target for antivirals and vaccine stabilisation.
Commun Biol, 5, 2022
8AYZ
DownloadVisualize
BU of 8ayz by Molmil
Poliovirus type 2 (strain MEF-1) virus-like particle in complex with capsid binder compound 17
Descriptor: 4-[[4-[1,3-bis(oxidanylidene)isoindol-2-yl]phenyl]sulfonylamino]benzoic acid, Capsid protein, VP0, ...
Authors:Bahar, M.W, Fry, E.E, Stuart, D.I.
Deposit date:2022-09-04
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (1.88 Å)
Cite:A conserved glutathione binding site in poliovirus is a target for antivirals and vaccine stabilisation.
Commun Biol, 5, 2022
8A4L
DownloadVisualize
BU of 8a4l by Molmil
Lipidic alpha-synuclein fibril - polymorph L2A
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-06-12
Release date:2022-08-17
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8B1U
DownloadVisualize
BU of 8b1u by Molmil
RecBCD-DNA in complex with the phage protein Abc2 and host PpiB
Descriptor: Anti-RecBCD protein 2, DNA (70-MER), MAGNESIUM ION, ...
Authors:Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
Deposit date:2022-09-12
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon