Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 41042 件

1NKI
DownloadVisualize
BU of 1nki by Molmil
CRYSTAL STRUCTURE OF THE FOSFOMYCIN RESISTANCE PROTEIN A (FOSA) CONTAINING BOUND PHOSPHONOFORMATE
分子名称: MANGANESE (II) ION, PHOSPHONOFORMIC ACID, POTASSIUM ION, ...
著者Rife, C.L, Pharris, R.E, Newcomer, M.E, Armstrong, R.N.
登録日2003-01-03
公開日2004-01-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Phosphonoformate: a minimal transition state analogue inhibitor of the fosfomycin resistance protein, FosA.
Biochemistry, 43, 2004
8BL6
DownloadVisualize
BU of 8bl6 by Molmil
De novo single-chain immunoglobulin dimer scIg12+EF3a
分子名称: GLYCEROL, TERBIUM(III) ION, dIG14-scdim-EF62
著者Nadal, M, Roel-Touris, J, Marcos, E.
登録日2022-11-09
公開日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Single-chain dimers from de novo immunoglobulins as robust scaffolds for multiple binding loops.
Nat Commun, 14, 2023
8RVP
DownloadVisualize
BU of 8rvp by Molmil
Proteasomal late precursor complex from pre1-1, state 2
分子名称: Probable proteasome subunit alpha type-7, Proteasome assembly chaperone 2, Proteasome chaperone 1, ...
著者Mark, E, Ramos, P.C, Kayser, F, Hoeckendorff, J, Dohmen, R.J, Wendler, P.
登録日2024-02-01
公開日2024-09-11
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献Structural roles of Ump1 and beta-subunit propeptides in proteasome biogenesis.
Life Sci Alliance, 7, 2024
6F3Z
DownloadVisualize
BU of 6f3z by Molmil
Complex of E. coli LolA and periplasmic domain of LolC
分子名称: Lipoprotein-releasing system transmembrane protein LolC, Outer-membrane lipoprotein carrier protein
著者Kaplan, E.
登録日2017-11-29
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into bacterial lipoprotein trafficking from a structure of LolA bound to the LolC periplasmic domain.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2M8G
DownloadVisualize
BU of 2m8g by Molmil
Structure, function, and tethering of DNA-binding domains in 54 transcriptional activators
分子名称: Transcriptional regulator
著者Hong, E, Wemmer, D.
登録日2013-05-19
公開日2013-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
6AWP
DownloadVisualize
BU of 6awp by Molmil
X-ray structure of the ts3 human serotonin transporter complexed with fluvoxamine at the central site
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody FAB heavy chain, 8B6 antibody FAB light chain, ...
著者Coleman, J.A, Gouaux, E.
登録日2017-09-06
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural basis for recognition of diverse antidepressants by the human serotonin transporter.
Nat. Struct. Mol. Biol., 25, 2018
6AWO
DownloadVisualize
BU of 6awo by Molmil
X-ray structure of the ts3 human serotonin transporter complexed with sertraline at the central site
分子名称: (1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody FAB heavy chain, ...
著者Coleman, J.A, Gouaux, E.
登録日2017-09-06
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.534 Å)
主引用文献Structural basis for recognition of diverse antidepressants by the human serotonin transporter.
Nat. Struct. Mol. Biol., 25, 2018
6H5W
DownloadVisualize
BU of 6h5w by Molmil
Crystal structure of human Angiotensin-1 converting enzyme C-domain in complex with Omapatrilat.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
著者Cozier, G.E, Acharya, K.R.
登録日2018-07-25
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Molecular Basis for Multiple Omapatrilat Binding Sites within the ACE C-Domain: Implications for Drug Design.
J. Med. Chem., 61, 2018
5CLX
DownloadVisualize
BU of 5clx by Molmil
X-ray structure of perdeuterated TTR mutant - S52P at 1.28A resolution
分子名称: GLYCEROL, Transthyretin
著者Yee, A.W, Moulin, M, Mossou, E, Haertlein, M, Mitchell, E.P, Cooper, J.B, Forsyth, V.T.
登録日2015-07-16
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献X-ray structure of perdeuterated TTR mutant - S52P at 1.28A resolution
To Be Published
8B67
DownloadVisualize
BU of 8b67 by Molmil
The crystal structure of M644G variant of DNA Pol Epsilon containing CTP in the polymerase active site
分子名称: ACETATE ION, CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, ...
著者Parkash, V, Johansson, E.
登録日2022-09-26
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A sensor complements the steric gate when DNA polymerase epsilon discriminates ribonucleotides.
Nucleic Acids Res., 2023
4FP4
DownloadVisualize
BU of 4fp4 by Molmil
Crystal structure of isoprenoid synthase a3mx09 (target efi-501993) from pyrobaculum calidifontis
分子名称: GERAN-8-YL GERAN, Polyprenyl synthetase, UNKNOWN ATOM OR ION, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-06-21
公開日2012-07-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
5CNB
DownloadVisualize
BU of 5cnb by Molmil
Ultrafast dynamics in myoglobin: 0.5 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
6YHT
DownloadVisualize
BU of 6yht by Molmil
A lid blocking mechanism of a cone snail toxin revealed at the atomic level
分子名称: CITRIC ACID, Conk-C1, SULFATE ION
著者Saikia, C, Altman-Gueta, H, Dym, O, Frolow, F, Gurevitz, M, Gordon, D, Reuveny, E, Karbat, I.
登録日2020-03-31
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Molecular Lid Mechanism of K + Channel Blocker Action Revealed by a Cone Peptide.
J.Mol.Biol., 433, 2021
8B7E
DownloadVisualize
BU of 8b7e by Molmil
The crystal structure of N828V variant of DNA Pol Epsilon containing UTP in the polymerase active site
分子名称: CALCIUM ION, DNA polymerase epsilon catalytic subunit A, GLYCEROL, ...
著者Parkash, V, Johansson, E.
登録日2022-09-29
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A sensor complements the steric gate when DNA polymerase epsilon discriminates ribonucleotides.
Nucleic Acids Res., 2023
4F62
DownloadVisualize
BU of 4f62 by Molmil
Crystal structure of a putative farnesyl-diphosphate synthase from Marinomonas sp. MED121 (Target EFI-501980)
分子名称: CHLORIDE ION, GLYCEROL, Geranyltranstransferase, ...
著者Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-05-14
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
8B77
DownloadVisualize
BU of 8b77 by Molmil
The crystal structure of N828V variant of DNA Pol Epsilon containing dATP in the polymerase active site
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase epsilon catalytic subunit A, ...
著者Parkash, V, Johansson, E.
登録日2022-09-29
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A sensor complements the steric gate when DNA polymerase epsilon discriminates ribonucleotides.
Nucleic Acids Res., 2023
8B6K
DownloadVisualize
BU of 8b6k by Molmil
The crystal structure of M644G variant of DNA Pol Epsilon containing dCTP in the polymerase active site
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase epsilon catalytic subunit A, ...
著者Parkash, V, Johansson, E.
登録日2022-09-27
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A sensor complements the steric gate when DNA polymerase epsilon discriminates ribonucleotides.
Nucleic Acids Res., 2023
7KGE
DownloadVisualize
BU of 7kge by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
分子名称: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGI
DownloadVisualize
BU of 7kgi by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-III
分子名称: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
6YJ2
DownloadVisualize
BU of 6yj2 by Molmil
Structural and DNA binding studies of the transcriptional repressor Rv2506 (BkaR) from Mycobacterium tuberculosis supports a role in L-Leucine catabolism
分子名称: GLYCEROL, Probable transcriptional regulatory protein (Probably TetR-family)
著者Keep, N.H, Pritchard, J.E, Sula, A, Cole, A.R, Kendall, S.L.
登録日2020-04-02
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and DNA binding studies of the transcriptional repressor Rv2506 (BkaR) from Mycobacterium tuberculosis supports a role in L-Leucine catabolism
To be published
4F8D
DownloadVisualize
BU of 4f8d by Molmil
Crystal Structure of an R46A mutant of the Restriction-Modification Controller Protein C.Esp1396I (Monoclinic Form)
分子名称: Regulatory protein, SODIUM ION, SULFATE ION
著者Martin, R.N.A, McGeehan, J.E, Kneale, G.G.
登録日2012-05-17
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.
Plos One, 9, 2014
8B79
DownloadVisualize
BU of 8b79 by Molmil
The crystal structure of M644G variant of DNA Pol Epsilon containing UTP in the polymerase active site
分子名称: ACETATE ION, CALCIUM ION, DNA polymerase epsilon catalytic subunit A, ...
著者Parkash, V, Johansson, E.
登録日2022-09-29
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A sensor complements the steric gate when DNA polymerase epsilon discriminates ribonucleotides.
Nucleic Acids Res., 2023
6F5D
DownloadVisualize
BU of 6f5d by Molmil
Trypanosoma brucei F1-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP synthase gamma subunit, ATP synthase subunit alpha, ...
著者Montgomery, M.G, Gahura, O, Leslie, A.G.W, Zikova, A, Walker, J.E.
登録日2017-12-01
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献ATP synthase fromTrypanosoma bruceihas an elaborated canonical F1-domain and conventional catalytic sites.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6H6K
DownloadVisualize
BU of 6h6k by Molmil
The structure of the FKR mutant of the archaeal translation initiation factor 2 gamma subunit in complex with GDPCP, obtained in the absence of magnesium salts in the crystallization solution.
分子名称: 1,2-ETHANEDIOL, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, SODIUM ION, ...
著者Nikonov, O, Kravchenko, O, Nevskaya, N, Stolboushkina, E, Gabdulkhakov, A, Garber, M, Nikonov, S.
登録日2018-07-27
公開日2019-04-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The third structural switch in the archaeal translation initiation factor 2 (aIF2) molecule and its possible role in the initiation of GTP hydrolysis and the removal of aIF2 from the ribosome.
Acta Crystallogr D Struct Biol, 75, 2019
7KGH
DownloadVisualize
BU of 7kgh by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
分子名称: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon