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PDB: 41042 results

6YXX
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BU of 6yxx by Molmil
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Descriptor: 12S ribosomal RNA, 50S ribosomal protein L13, putative, ...
Authors:Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2020-05-04
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Mol.Cell, 79, 2020
6SRS
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BU of 6srs by Molmil
Structure of the Fanconi anaemia core subcomplex
Descriptor: Fanconi anaemia protein FANCL, Unassigned secondary structure elements (central region, proposed FANCB-FAAP100), ...
Authors:Shakeel, S, Rajendra, E, Alcon, P, He, S, Scheres, S.H.W, Passmore, L.A.
Deposit date:2019-09-05
Release date:2019-11-06
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structure of the Fanconi anaemia monoubiquitin ligase complex.
Nature, 575, 2019
6JL4
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BU of 6jl4 by Molmil
Crystal structure of aspartate transcarbamoylase from Trypanosoma cruzi in complex with carbamoyl aspartate (CA) and phosphate (Pi)
Descriptor: ASPARTIC ACID, Aspartate carbamoyltransferase, N-CARBAMOYL-L-ASPARTATE, ...
Authors:Matoba, K, Shiba, T, Nara, T, Aoki, T, Nagasaki, S, Hayamizu, R, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Balogun, E.O, Inaoka, D.K, Kita, K, Harada, S.
Deposit date:2019-03-04
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic snapshots of Trypanosoma cruzi aspartate transcarbamoylase revealed an ordered Bi-Bi reaction mechanism
To Be Published
3J41
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BU of 3j41 by Molmil
Pseudo-atomic model of the Aquaporin-0/Calmodulin complex derived from electron microscopy
Descriptor: CALCIUM ION, Calmodulin, Lens fiber major intrinsic protein
Authors:Reichow, S.L, Clemens, D.M, Freites, J.A, Nemeth-Cahalan, K.L, Heyden, M, Tobias, D.J, Hall, J.E, Gonen, T.
Deposit date:2013-05-31
Release date:2013-07-31
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Allosteric mechanism of water-channel gating by Ca(2+)-calmodulin.
Nat.Struct.Mol.Biol., 20, 2013
6QDS
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BU of 6qds by Molmil
Crystal structure of 14-3-3sigma in complex with a PAK6 pT99 phosphopeptide stabilized by semi-synthetic fusicoccane FC-NCPC
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, FC-NCPC, ...
Authors:Andrei, S.A, Kaplan, A, Fournier, A.E, Ottman, C.
Deposit date:2019-01-02
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Polypharmacological Perturbation of the 14-3-3 Adaptor Protein Interactome Stimulates Neurite Outgrowth.
Cell Chem Biol, 27, 2020
6QEP
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BU of 6qep by Molmil
EngBF DARPin Fusion 4b H14
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MANGANESE (II) ION, ...
Authors:Ernst, P, Pluckthun, A, Mittl, P.R.E.
Deposit date:2019-01-08
Release date:2019-11-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of biological targets by host:guest crystal lattice engineering.
Sci Rep, 9, 2019
8HYG
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BU of 8hyg by Molmil
Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1 at pH 4.6
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, CHLORIDE ION, ...
Authors:Tsao, H.E, Lui, S.N, Wong, K.B.
Deposit date:2023-01-06
Release date:2023-01-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1 at pH 4.6
To Be Published
6QFO
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BU of 6qfo by Molmil
EngBF DARPin Fusion 9b 3G124
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MANGANESE (II) ION, ...
Authors:Ernst, P, Pluckthun, A, Mittl, P.R.E.
Deposit date:2019-01-10
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of biological targets by host:guest crystal lattice engineering.
Sci Rep, 9, 2019
6QGC
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BU of 6qgc by Molmil
PETase from Ideonella sakaiensis without ligand
Descriptor: CHLORIDE ION, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Palm, G.J, Reisky, L, Boettcher, D, Mueller, H, Michels, E.A.P, Walczak, C, Berndt, L, Weiss, M.S, Bornscheuer, U.T, Weber, G.
Deposit date:2019-01-10
Release date:2019-04-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the plastic-degrading Ideonella sakaiensis MHETase bound to a substrate.
Nat Commun, 10, 2019
8SM3
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BU of 8sm3 by Molmil
Structure of Bacillus cereus VD045 Gabija GajA-GajB Complex
Descriptor: Endonuclease GajA, Gabija protein GajB, SULFATE ION
Authors:Antine, S.P, Mooney, S.E, Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-04-25
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, 625, 2024
3JSK
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BU of 3jsk by Molmil
Thiazole synthase from Neurospora crassa
Descriptor: ADENOSINE DIPHOSPHATE 5-(BETA-ETHYL)-4-METHYL-THIAZOLE-2-CARBOXYLIC ACID, CyPBP37 protein, FE (II) ION
Authors:Kang, Y.N, Bale, S, Ealick, S.E.
Deposit date:2009-09-10
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of thiazole synthase Thi4 from Neurospora crassa
to be published
8CJY
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BU of 8cjy by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant S357T
Descriptor: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, ...
Authors:Brocks, C, Duan, J, Hofmann, E, Happe, T.
Deposit date:2023-02-13
Release date:2023-10-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Dynamic Water Channel Affects O 2 Stability in [FeFe]-Hydrogenases.
Chemsuschem, 17, 2024
6XE0
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BU of 6xe0 by Molmil
Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
Descriptor: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Washburn, R, Zuber, P, Sun, M, Hashem, Y, Shen, B, Li, W, Harvey, S, Acosta-Reyes, F.J, Knauer, S.H, Frank, J, Gottesman, M.E.
Deposit date:2020-06-11
Release date:2020-07-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Escherichia coli NusG Links the Lead Ribosome with the Transcription Elongation Complex.
Iscience, 23, 2020
5I6Z
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BU of 5i6z by Molmil
X-ray structure of the ts2 human serotonin transporter
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ...
Authors:Coleman, J.A, Green, E.M, Gouaux, E.
Deposit date:2016-02-16
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4.53 Å)
Cite:X-ray structures and mechanism of the human serotonin transporter.
Nature, 532, 2016
4G4J
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BU of 4g4j by Molmil
Crystal structure of glucuronoyl esterase S213A mutant from Sporotrichum thermophile in complex with methyl 4-O-methyl-beta-D-glucopyranuronate determined at 2.35 A resolution
Descriptor: 1,2-ETHANEDIOL, 4-O-methyl-glucuronoyl methylesterase, GLYCEROL, ...
Authors:Charavgi, M.D, Dimarogona, M, Topakas, E, Christakopoulos, P, Chrysina, E.D.
Deposit date:2012-07-16
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of a novel glucuronoyl esterase from Myceliophthora thermophila gives new insights into its role as a potential biocatalyst.
Acta Crystallogr.,Sect.D, 69, 2013
8HUA
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BU of 8hua by Molmil
Serial synchrotron crystallography structure of ba3-type cytochrome c oxidase from Thermus thermophilus using a goniometer compatible flow-cell
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Ghosh, S, Zoric, D, Bjelcic, M, Johannesson, J, Sandelin, E, Branden, G, Neutze, R.
Deposit date:2022-12-22
Release date:2023-03-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:A simple goniometer-compatible flow cell for serial synchrotron X-ray crystallography.
J.Appl.Crystallogr., 56, 2023
5I0V
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BU of 5i0v by Molmil
IRON AND COPPER-BOUND P19 FROM CAMPYLOBACTER JEJUNI UNDER OXIDIZING CONDITIONS
Descriptor: CHLORIDE ION, COPPER (II) ION, FE (III) ION, ...
Authors:Chan, A.C, Murphy, M.E.
Deposit date:2016-02-04
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A copper site is required for iron transport by the periplasmic proteins P19 and FetP.
Metallomics, 12, 2020
4JS4
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BU of 4js4 by Molmil
Crystal structure of E. coli Exonuclease I in complex with a dA16 oligonucleotide
Descriptor: Exodeoxyribonuclease I, SULFATE ION, dT16 oligonucleotide
Authors:Bell, C.E.
Deposit date:2013-03-22
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of Escherichia coli exonuclease I in complex with single-stranded DNA provide insights into the mechanism of processive digestion.
Nucleic Acids Res., 41, 2013
1NXF
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BU of 1nxf by Molmil
Ligand-linked transitions of deoxyHbI crystals exposed to CO.
Descriptor: CARBON MONOXIDE, Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-10
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
6QFI
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BU of 6qfi by Molmil
Structure of human Mcl-1 in complex with BIM BH3 peptide
Descriptor: Bcl-2-like protein 11, Induced myeloid leukemia cell differentiation protein Mcl-1, ZINC ION
Authors:Dokurno, P, Murray, J, Davidson, J, Chen, I, Davis, B, Graham, C.J, Harris, R, Jordan, A.M, Matassova, N, Pedder, C, Ray, S, Roughley, S, Smith, J, Walmsley, C, Wang, Y, Whitehead, N, Williamson, D.S, Casara, P, Le Diguarher, T, Hickman, J, Stark, J, Kotschy, A, Geneste, O, Hubbard, R.E.
Deposit date:2019-01-10
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Establishing Drug Discovery and Identification of Hit Series for the Anti-apoptotic Proteins, Bcl-2 and Mcl-1.
Acs Omega, 4, 2019
1FQO
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BU of 1fqo by Molmil
GLUCOSAMINE 6-PHOSPHATE DEAMINASE COMPLEXED WITH THE SUBSTRATE OF THE REVERSE REACTION FRUCTOSE 6-PHOSPHATE (OPEN FORM)
Descriptor: FRUCTOSE -6-PHOSPHATE, GLUCOSAMINE-6-PHOSPHATE DEAMINASE
Authors:Rudino-Pinera, E, Morales-Arrieta, S, Rojas-Trejo, S.P, Horjales, E.
Deposit date:2000-09-06
Release date:2002-01-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural flexibility, an essential component of the allosteric activation in Escherichia coli glucosamine-6-phosphate deaminase.
Acta Crystallogr.,Sect.D, 58, 2002
6XCL
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BU of 6xcl by Molmil
Crystal Structure of human telomeric DNA G-quadruplex in complex with a novel platinum(II) complex.
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), POTASSIUM ION, ...
Authors:Miron, C.E, van Staalduinen, L.M, Jia, Z, Petitjean, A.
Deposit date:2020-06-08
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Going Platinum to the Tune of a Remarkable Guanine Quadruplex Binder: Solution- and Solid-State Investigations.
Angew.Chem.Int.Ed.Engl., 60, 2021
8PAZ
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BU of 8paz by Molmil
OXIDIZED NATIVE PSEUDOAZURIN FROM A. FAECALIS
Descriptor: COPPER (II) ION, PSEUDOAZURIN
Authors:Adman, E.T, Libeu, C.A.P.
Deposit date:1997-02-24
Release date:1997-08-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Site-directed mutants of pseudoazurin: explanation of increased redox potentials from X-ray structures and from calculation of redox potential differences.
Biochemistry, 36, 1997
5IDI
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BU of 5idi by Molmil
Structure of beta glucosidase 1A from Thermotoga neapolitana, mutant E349A
Descriptor: 1,4-beta-D-glucan glucohydrolase, ACETATE ION
Authors:Kulkarni, T, Nordberg Karlsson, E, Logan, D.T.
Deposit date:2016-02-24
Release date:2017-02-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of beta-glucosidase 1A from Thermotoga neapolitana and comparison of active site mutants for hydrolysis of flavonoid glucosides.
Proteins, 85, 2017
8PAJ
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BU of 8paj by Molmil
Crystal Structure of a Squalene-Hopene cyclase from Archangium gephyra
Descriptor: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, ...
Authors:Worthy, H.L, Isupov, M.N, Littlechild, J.A, Mitchell, D.E.
Deposit date:2023-06-08
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure of a mesophilic Squalene-Hopene Cyclases from Cystobacter fuscus and Archangium gephyra
To Be Published

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