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PDB: 109 件

6ZBS
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Beta ODAP Synthetase (BOS)
分子名称: Beta ODAP Synthetase (BOS), DI(HYDROXYETHYL)ETHER, MAGNESIUM ION
著者Dym, O.
登録日2020-06-09
公開日2022-01-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Identification and characterization of the key enzyme in the biosynthesis of the neurotoxin beta-ODAP in grass pea.
J.Biol.Chem., 298, 2022
1HLP
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STRUCTURAL FEATURES STABILIZING HALOPHILIC MALATE DEHYDROGENASE FROM AN ARCHAEBACTERIUM
分子名称: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Dym, O, Mevarech, M, Sussman, J.L.
登録日1994-10-04
公開日1995-01-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Features That Stabilize Halophilic Malate Dehydrogenase from an Archaebacterium.
Science, 267, 1995
1F0X
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CRYSTAL STRUCTURE OF D-LACTATE DEHYDROGENASE, A PERIPHERAL MEMBRANE RESPIRATORY ENZYME.
分子名称: D-LACTATE DEHYDROGENASE, FLAVIN-ADENINE DINUCLEOTIDE
著者Dym, O, Pratt, E.A, Ho, C, Eisenberg, D.
登録日2000-05-17
公開日2000-08-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of D-lactate dehydrogenase, a peripheral membrane respiratory enzyme.
Proc.Natl.Acad.Sci.USA, 97, 2000
5NB5
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Principles for computational design of antibodies
分子名称: design of antibodies
著者Dym, O, Fleishman, S.J.
登録日2017-03-01
公開日2017-09-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Principles for computational design of binding antibodies.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6QJZ
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Identificationand Characterization of an Oxalylfrom Grass pea (Lathyrus sativusCoA-Synthetase L.)
分子名称: ADENOSINE MONOPHOSPHATE, oxalyl CoA-synthetase
著者Dym, O.
登録日2019-01-28
公開日2020-08-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The identification and characterization of an oxalyl-CoA synthetase from grass pea ( Lathyrus sativus L.).
Rsc Chem Biol, 3, 2022
5NBI
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Principles for computational design of antibodies
分子名称: Design of antibodies
著者Dym, O, Fleishman, S.J.
登録日2017-03-02
公開日2017-09-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Principles for computational design of binding antibodies.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5DLP
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Acetylcholinesterase Methylene Blue no PEG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM, Acetylcholinesterase, ...
著者Dym, O.
登録日2015-09-07
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The impact of crystallization conditions on structure-based drug design: A case study on the methylene blue/acetylcholinesterase complex.
Protein Sci., 25, 2016
3HQJ
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Structure-function analysis of Mycobacterium tuberculosis acyl carrier protein synthase (AcpS).
分子名称: COENZYME A, Holo-[acyl-carrier-protein] synthase, MAGNESIUM ION
著者Dym, O, Albeck, S, Peleg, Y, Schwarz, A, Shakked, Z, Burstein, Y, Zimhony, O, Israel Structural Proteomics Center (ISPC)
登録日2009-06-07
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-function analysis of the acyl carrier protein synthase (AcpS) from Mycobacterium tuberculosis.
J.Mol.Biol., 393, 2009
3JYM
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Crystal Structure of the 3 FKBP domains of wheat FKBP73
分子名称: FK506-binding protein (FKBP) from wheat
著者Dym, O, Breiman, A, Israel Structural Proteomics Center (ISPC)
登録日2009-09-22
公開日2010-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structure of the three FK506 binding protein domains of wheat FKBP73: evidence for a unique wFK73_2 domain
J.STRUCT.FUNCT.GENOM., 11, 2010
3D3M
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The Crystal Structure of the C-terminal region of Death Associated Protein 5(DAP5)
分子名称: Eukaryotic translation initiation factor 4 gamma 2
著者Dym, O, Israel Structural Proteomics Center (ISPC)
登録日2008-05-12
公開日2008-10-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of the C-terminal DAP5/p97 domain sheds light on the molecular basis for its processing by caspase cleavage.
J.Mol.Biol., 383, 2008
3BTN
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Crystal structure of antizyme inhibitor, an ornithine decarboxylase homologous protein
分子名称: Antizyme inhibitor 1
著者Dym, O, Unger, T, Albeck, S, Kahana, C, Israel Structural Proteomics Center (ISPC)
登録日2007-12-30
公開日2008-04-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic and biochemical studies revealing the structural basis for antizyme inhibitor function.
Protein Sci., 17, 2008
3BTP
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Crystal structure of Agrobacterium tumefaciens VirE2 in complex with its chaperone VirE1: a novel fold and implications for DNA binding
分子名称: AMMONIUM ION, DI(HYDROXYETHYL)ETHER, Protein virE1, ...
著者Dym, O, Albeck, S, Unger, T, Elbaum, M, Israel Structural Proteomics Center (ISPC)
登録日2007-12-30
公開日2008-08-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the Agrobacterium virulence complex VirE1-VirE2 reveals a flexible protein that can accommodate different partners.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5E4J
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Acetylcholinesterase Methylene Blue no PEG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, DECAMETHONIUM ION, ...
著者Dym, O.
登録日2015-10-06
公開日2016-03-30
最終更新日2021-05-12
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献The impact of crystallization conditions on structure-based drug design: A case study on the methylene blue/acetylcholinesterase complex.
Protein Sci., 25, 2016
5E4T
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Acetylcholinesterase Methylene Blue with PEG
分子名称: 1,2-ETHANEDIOL, 3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM, Acetylcholinesterase, ...
著者Dym, O.
登録日2015-10-07
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献The impact of crystallization conditions on structure-based drug design: A case study on the methylene blue/acetylcholinesterase complex.
Protein Sci., 25, 2016
5E2I
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Acetylcholinesterase Methylene Blue no PEG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, DECAMETHONIUM ION, ...
著者Dym, O.
登録日2015-10-01
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The impact of crystallization conditions on structure-based drug design: A case study on the methylene blue/acetylcholinesterase complex.
Protein Sci., 25, 2016
2RCI
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BU of 2rci by Molmil
High-resolution crystal structure of activated Cyt2Ba monomer from Bacillus thuringiensis subsp. israelensis
分子名称: Type-2Ba cytolytic delta-endotoxin
著者Dym, O, Israel Structural Proteomics Center (ISPC)
登録日2007-09-20
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-resolution crystal structure of activated Cyt2Ba monomer from Bacillus thuringiensis subsp. israelensis.
J.Mol.Biol., 380, 2008
3GKL
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Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins
分子名称: Colicin-E7, Colicin-E9 immunity protein, ZINC ION
著者Dym, O, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2009-03-11
公開日2009-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Following evolutionary paths to high affinity and selectivity protein-protein interactions
To be Published
3GJN
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Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins
分子名称: Colicin-E7, Colicin-E9 immunity protein, ZINC ION
著者Dym, O, Tawfik, D.S.
登録日2009-03-09
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Following evolutionary paths to protein-protein interactions with high affinity and selectivity
Nat.Struct.Mol.Biol., 16, 2009
3JXV
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Crystal Structure of the 3 FKBP domains of wheat FKBP73
分子名称: 70 kDa peptidyl-prolyl isomerase
著者Dym, O, Breiman, A, Israel Structural Proteomics Center (ISPC)
登録日2009-09-21
公開日2010-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal structure of the three FK506 binding protein domains of wheat FKBP73: evidence for a unique wFK73_2 domain.
J Struct Funct Genomics, 11, 2010
4PQE
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Crystal Structure of Human Acetylcholinesterase
分子名称: Acetylcholinesterase
著者Dym, O, Unger, T, Toker, L, Silman, I, Sussman, J.L, Israel Structural Proteomics Center (ISPC)
登録日2014-03-02
公開日2015-04-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of Human Acetylcholinesterase
To be Published
8P7I
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The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: (2~{S},6~{R})-2,6-dimethyl-1,3-dioxane-4,4-diol, FORMIC ACID, Parathion hydrolase, ...
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-30
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7N
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The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: FORMIC ACID, Parathion hydrolase, ZINC ION
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-30
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7V
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The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: 1,2-ETHANEDIOL, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ...
著者Dym, O, Aggawal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-31
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.737 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7S
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The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: 1,2-ETHANEDIOL, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ...
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-31
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7Q
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The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, GLYCEROL, ...
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-30
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023

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