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PDB: 189 results

7VSP
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BU of 7vsp by Molmil
Crystal strcuture of the tandem B-Box domains of COL2
Descriptor: ZINC ION, Zinc finger protein CONSTANS-LIKE 2
Authors:Lv, X, Liu, R, Du, J.
Deposit date:2021-10-27
Release date:2022-03-02
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis of CONSTANS oligomerization in FLOWERING LOCUS T activation.
J Integr Plant Biol, 64, 2022
6IP0
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BU of 6ip0 by Molmil
Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with AKG
Descriptor: 2-OXOGLUTARIC ACID, NICKEL (II) ION, SULFATE ION, ...
Authors:Hu, H, Du, J.
Deposit date:2018-11-01
Release date:2019-04-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Nat Commun, 10, 2019
6IP4
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Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with NOG and an H3K27me3 peptide
Descriptor: Arabidopsis JMJ13, Histone H3.2, N-OXALYLGLYCINE, ...
Authors:Hu, H, Du, J.
Deposit date:2018-11-02
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Nat Commun, 10, 2019
6J9A
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BU of 6j9a by Molmil
Crystal structure of Arabidopsis thaliana VAL1 in complex with FLC DNA fragment
Descriptor: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
Authors:Hu, H, Du, J.
Deposit date:2019-01-22
Release date:2019-05-29
Method:X-RAY DIFFRACTION (2.915 Å)
Cite:Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6J9C
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BU of 6j9c by Molmil
Crystal structure of Arabidopsis thaliana transcription factor LEC2-DNA complex
Descriptor: B3 domain-containing transcription factor LEC2, DNA (5'-D(*CP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3')
Authors:Hu, H, Du, J.
Deposit date:2019-01-22
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6J9B
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BU of 6j9b by Molmil
Arabidopsis FUS3-DNA complex
Descriptor: B3 domain-containing transcription factor FUS3, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
Authors:Hu, H, Du, J.
Deposit date:2019-01-22
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
7CCE
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BU of 7cce by Molmil
crystal structure of Arabidopsis AIPP3 BAH domain in complex with an H3K27me3 peptide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bromo-adjacent homology (BAH) domain-containing protein, Histone H3.2
Authors:Yuan, J, Du, J.
Deposit date:2020-06-17
Release date:2020-12-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis.
Nat Commun, 11, 2020
8DGG
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BU of 8dgg by Molmil
Structure of glycosylated LAG-3 homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Silberstein, J.L, Mathews, I.I, Frank, J.A, Chan, K.-W, Fernandez, D, Du, J, Wang, J, Kong, X.-P, Cochran, J.R.
Deposit date:2022-06-23
Release date:2022-08-17
Last modified:2022-08-31
Method:X-RAY DIFFRACTION (3.78 Å)
Cite:Structural basis for LAG-3 dimeric association and inhibition of T cell function
To Be Published
7CVQ
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BU of 7cvq by Molmil
crystal structure of Arabidopsis CO CCT domain in complex with NF-YB2/YC3 and FT CORE1 DNA
Descriptor: Chimera of Nuclear transcription factor Y subunit C-3 and Zinc finger protein CONSTANS, FT CORE1 DNA forward strand, FT CORE1 DNA reverse strand, ...
Authors:Lv, X, Du, J.
Deposit date:2020-08-26
Release date:2021-06-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural insights into the multivalent binding of the Arabidopsis FLOWERING LOCUS T promoter by the CO-NF-Y master transcription factor complex.
Plant Cell, 33, 2021
7CVO
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BU of 7cvo by Molmil
crystal structure of Arabidopsis CO CCT domain in complex with NF-YB3/YC4 and FT CORE2 DNA
Descriptor: Chimera of Nuclear transcription factor Y subunit C-4 and Zinc finger protein CONSTANS, FT CORE2 DNA forward strand, FT CORE2 DNA reverse strand, ...
Authors:Lv, X, Du, J.
Deposit date:2020-08-26
Release date:2021-06-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the multivalent binding of the Arabidopsis FLOWERING LOCUS T promoter by the CO-NF-Y master transcription factor complex.
Plant Cell, 33, 2021
7ET5
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BU of 7et5 by Molmil
Crystal structure of Arabidopsis TEM1 AP2 domain
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, SULFATE ION
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.052 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ET6
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BU of 7et6 by Molmil
Crystal structure of Arabidopsis TEM1 B3-DNA complex
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, FT-RY14-F, FT-RY14-R
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ET4
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BU of 7et4 by Molmil
Crystal structure of Arabidopsis TEM1 AP2 domain
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, DNA (12-mer)
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DE9
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BU of 7de9 by Molmil
crystal structure of Arabidopsis RDM15 tudor domain in complex with an H3K4me1 peptide
Descriptor: Histone H3.2, Transcriptional regulator
Authors:Song, Z, Du, J.
Deposit date:2020-11-03
Release date:2021-04-07
Last modified:2021-06-23
Method:X-RAY DIFFRACTION (1.711 Å)
Cite:A histone H3K4me1-specific binding protein is required for siRNA accumulation and DNA methylation at a subset of loci targeted by RNA-directed DNA methylation.
Nat Commun, 12, 2021

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PDB entries from 2024-05-08

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