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PDB: 162 件

8I2U
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Crystal structure of AtHPPD-YH20282 complex
分子名称: 2-[2-chloranyl-4-methylsulfonyl-3-(2-trimethylsilylethoxy)phenyl]carbonyl-3-oxidanyl-cyclohex-2-en-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-01-15
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献Crystal structure of AtHPPD-YH20282 complex
To Be Published
8I2S
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Crystal structure of AtHPPD-Y18979 complex
分子名称: 1,5-dimethyl-3-(naphthalen-2-ylmethyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-01-15
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.592 Å)
主引用文献Crystal structure of AtHPPD-Y18979 complex
To Be Published
8HX2
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Crystal structure of AtHPPD-Y18405 complex
分子名称: 3-[2-(3-chlorophenyl)ethyl]-1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexa-1,3-dien-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-01-03
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Crystal structure of AtHPPD-Y18405 complex
To Be Published
8HZ9
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Crystal structure of AtHPPD-Y181136 complex
分子名称: 4-hydroxyphenylpyruvate dioxygenase, 5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-3-propan-2-yl-1,2,3-benzotriazin-4-one, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-01-08
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Crystal structure of AtHPPD-Y181136 complex
To Be Published
8HZ6
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Crystal structure of AtHPPD-QRY2089 complex
分子名称: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-prop-2-ynyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-01-08
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.605 Å)
主引用文献Crystal structure of AtHPPD-QRY2089 complex
To Be Published
1BWI
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THE 1.8 A STRUCTURE OF MICROBATCH OIL DROP GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
分子名称: PROTEIN (LYSOZYME)
著者Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
登録日1998-09-24
公開日1998-09-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BVX
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THE 1.8 A STRUCTURE OF GEL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
分子名称: PROTEIN (LYSOZYME)
著者Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C, Helliwell, J.R.
登録日1998-09-18
公開日1998-09-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWH
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THE 1.8 A STRUCTURE OF GROUND CONTROL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
分子名称: PROTEIN (LYSOZYME)
著者Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
登録日1998-09-24
公開日1998-09-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWJ
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THE 1.8 A STRUCTURE OF MICROGRAVITY GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
分子名称: PROTEIN (LYSOZYME)
著者Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
登録日1998-09-18
公開日1998-09-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
6P9J
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crystal structure of human anti staphylococcus aureus antibody STAU-229 Fab
分子名称: TRIS(HYDROXYETHYL)AMINOMETHANE, human anti staphylococcus aureus antibody STAU-229 Fab heavy chain, human anti staphylococcus aureus antibody STAU-229 Fab light chain
著者Dong, J, Crowe, J.E.
登録日2019-06-10
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6P9I
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crystal structure of human anti staphylococcus aureus antibody STAU-399 Fab
分子名称: human anti staphylococcus aureus antibody STAU-399 Fab heavy chain, human anti staphylococcus aureus antibody STAU-399 Fab light chain
著者Dong, J, Crowe, J.E.
登録日2019-06-10
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
3QSQ
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BU of 3qsq by Molmil
Crystal structure of the projection domain of the human astrovirus capsid protein
分子名称: Capsid polyprotein
著者Dong, J, Dong, L, Mendez, E, Tao, Y.J.
登録日2011-02-21
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the human astrovirus capsid spike.
Proc.Natl.Acad.Sci.USA, 108, 2011
4TS8
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Crystal structure of the bromodomain of human CREBBP in complex with XZ08
分子名称: 1,2-ETHANEDIOL, 4-(1-acetyl-1H-indol-3-yl)-5-methyl-1,2-dihydro-3H-pyrazol-3-one, CREB-binding protein
著者Dong, J, Gartenmann, L, Spiliotopoulos, D, Caflisch, A.
登録日2014-06-18
公開日2015-07-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the bromodomain of human CREBBP in complex with XZ08
To Be Published
4TWO
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BU of 4two by Molmil
Human EphA3 Kinase domain in complex with compound 164
分子名称: 5-{[3-carbamoyl-4-(3,4-dimethylphenyl)-5-methylthiophen-2-yl]amino}-5-oxopentanoic acid, Ephrin type-A receptor 3
著者Dong, J, Caflisch, A.
登録日2014-07-01
公開日2015-05-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural Analysis of the Binding of Type I, I1/2, and II Inhibitors to Eph Tyrosine Kinases.
Acs Med.Chem.Lett., 6, 2015
4TWN
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Human EphA3 Kinase domain in complex with Birb796
分子名称: 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA, Ephrin type-A receptor 3
著者Dong, J, Caflisch, A.
登録日2014-07-01
公開日2015-05-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.706 Å)
主引用文献Structural Analysis of the Binding of Type I, I1/2, and II Inhibitors to Eph Tyrosine Kinases.
Acs Med.Chem.Lett., 6, 2015
7L7D
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BU of 7l7d by Molmil
Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibody AZD8895
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Spike protein S1, ...
著者Dong, J, Crowe, J.E.
登録日2020-12-28
公開日2021-09-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail.
Nat Microbiol, 6, 2021
7L7E
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Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, Spike protein S1, ...
著者Dong, J, Crowe, J.E.
登録日2020-12-28
公開日2021-09-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail.
Nat Microbiol, 6, 2021
4XNH
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BU of 4xnh by Molmil
Crystal structure of yeast N-terminal acetyltransferase NatE (IP6) in complex with a bisubstrate
分子名称: ACETYL COENZYME *A, ACYH8, CARBOXYMETHYL COENZYME *A, ...
著者Dong, J, Wang, S, York, J.D.
登録日2015-01-15
公開日2016-07-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of yeast N-terminal acetyltransferase NatE (IP6) in complex with a bisubstrate
To Be Published
4XPD
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Crystal structure of yeast N-terminal acetyltransferase NatE (ppGpp) in complex with a bisubstrate
分子名称: ACETYL COENZYME *A, CARBOXYMETHYL COENZYME *A, GUANOSINE-5',3'-TETRAPHOSPHATE, ...
著者Dong, J, Wang, S, York, J.D.
登録日2015-01-16
公開日2016-07-20
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure of yeast N-terminal acetyltransferase NatE (ppGpp) in complex with a bisubstrate
To Be Published
4Y49
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Crystal structure of yeast N-terminal acetyltransferase (ppGpp) NatE in complex with a bisubstrate
分子名称: ACETYL COENZYME *A, ALA-ALA-ALA-ALA-ALA-ALA, CARBOXYMETHYL COENZYME *A, ...
著者Dong, J, Wang, S, York, J.D.
登録日2015-02-10
公開日2016-07-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Crystal structure of yeast N-terminal acetyltransferase (ppGpp) NatE in complex with a bisubstrate
To Be Published
5OBO
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BU of 5obo by Molmil
Crystal structure of nitrite bound D97N mutant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
分子名称: COPPER (II) ION, GLYCEROL, HEME C, ...
著者Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-28
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
6P3S
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Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, Human Fab H5.28 heavy chain, ...
著者Dong, J, Crowe, J.E.
登録日2019-05-24
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
To Be Published
6P3R
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crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Dong, J, Crowe, J.E.
登録日2019-05-24
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
To Be Published
5OCB
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BU of 5ocb by Molmil
Crystal structure of nitric oxide bound D97N mutant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
分子名称: COPPER (II) ION, HEME C, NITRIC OXIDE, ...
著者Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-30
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
5JRP
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crystal structure of monoclonal antibody MR78 Fab
分子名称: SODIUM ION, marberg virus monoclonal antibody MR78 Fab heavy chain, marberg virus monoclonal antibody MR78 Fab light chain
著者Dong, J, Crowe, J.
登録日2016-05-06
公開日2017-11-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Role of Non-local Interactions between CDR Loops in Binding Affinity of MR78 Antibody to Marburg Virus Glycoprotein.
Structure, 25, 2017

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