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PDB: 113 results
6Q5Y
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BU of 6q5y by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser5
Descriptor: PHD finger protein 3, pSer2pSer5
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-09
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
4JG3
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BU of 4jg3 by Molmil
Crystal structure of catabolite repression control protein (crc) from Pseudomonas aeruginosa
Descriptor: CHLORIDE ION, Catabolite repression control protein
Authors:Grishkovskaya, I, Milojevic, T, Sonnleitner, E, Blaesi, U, Djinovic-Carugo, K.
Deposit date:2013-02-28
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Pseudomonas aeruginosa Catabolite Repression Control Protein Crc Is Devoid of RNA Binding Activity
Plos One, 8, 2013
3QHS
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BU of 3qhs by Molmil
Crystal structure of full-length Hfq from Escherichia coli
Descriptor: Protein hfq
Authors:Beich-Frandsen, M, Vecerek, B, Sjoeblom, B, Blaesi, U, Djinovic-Carugo, K.
Deposit date:2011-01-26
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural analysis of full-length Hfq from Escherichia coli
Acta Crystallogr.,Sect.F, 67, 2011
3NN4
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BU of 3nn4 by Molmil
Structure of chlorite dismutase from Candidatus Nitrospira defluvii R173K mutant
Descriptor: Chlorite dismutase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Kostan, J, Sjoeblom, B, Maixner, F, Mlynek, G, Furtmueller, P.G, Obinger, C, Wagner, M, Daims, H, Djinovic-Carugo, K.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional characterisation of the chlorite dismutase from the nitrite-oxidizing bacterium "Candidatus Nitrospira defluvii": Identification of a catalytically important amino acid residue
J.Struct.Biol., 172, 2010
3NN1
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BU of 3nn1 by Molmil
Structure of chlorite dismutase from Candidatus Nitrospira defluvii in complex with imidazole
Descriptor: 1,2-ETHANEDIOL, Chlorite dismutase, IMIDAZOLE, ...
Authors:Kostan, J, Sjoeblom, B, Maixner, F, Mlynek, G, Furtmueller, P.G, Obinger, C, Wagner, M, Daims, H, Djinovic-Carugo, K.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and functional characterisation of the chlorite dismutase from the nitrite-oxidizing bacterium "Candidatus Nitrospira defluvii": Identification of a catalytically important amino acid residue
J.Struct.Biol., 172, 2010
3NN3
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BU of 3nn3 by Molmil
Structure of chlorite dismutase from Candidatus Nitrospira defluvii R173A mutant
Descriptor: Chlorite dismutase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Kostan, J, Sjoeblom, B, Maixner, F, Mlynek, G, Furtmueller, P.G, Obinger, C, Wagner, M, Daims, H, Djinovic-Carugo, K.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional characterisation of the chlorite dismutase from the nitrite-oxidizing bacterium "Candidatus Nitrospira defluvii": Identification of a catalytically important amino acid residue
J.Struct.Biol., 172, 2010
7OU5
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BU of 7ou5 by Molmil
Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 in complex with nitrite
Descriptor: Chlorite Dismutase, GLYCEROL, NITRITE ION, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2021-06-11
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Impact of the dynamics of the catalytic arginine on nitrite and chlorite binding by dimeric chlorite dismutase.
J.Inorg.Biochem., 227, 2021
7OU7
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BU of 7ou7 by Molmil
Crystal structure of dimeric chlorite dismutase variant Q74V (CCld Q74V) from Cyanothece sp. PCC7425 in complex with nitrite
Descriptor: Chlorite dismutase, GLYCEROL, NITRITE ION, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2021-06-11
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Impact of the dynamics of the catalytic arginine on nitrite and chlorite binding by dimeric chlorite dismutase.
J.Inorg.Biochem., 227, 2021
7OWI
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BU of 7owi by Molmil
Crystal structure of dimeric chlorite dismutase variant R127A (CCld R127A) from Cyanothece sp. PCC7425
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Chlorite dismutase, DI(HYDROXYETHYL)ETHER, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2021-06-18
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Impact of the dynamics of the catalytic arginine on nitrite and chlorite binding by dimeric chlorite dismutase.
J.Inorg.Biochem., 227, 2021
7OU9
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BU of 7ou9 by Molmil
Crystal structure of dimeric chlorite dismutase variant Q74E (CCld Q74E) from Cyanothece sp. PCC7425 in complex with nitrite
Descriptor: Chlorite dismutase, GLYCEROL, NITRITE ION, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2021-06-11
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Impact of the dynamics of the catalytic arginine on nitrite and chlorite binding by dimeric chlorite dismutase.
J.Inorg.Biochem., 227, 2021
7OUA
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BU of 7oua by Molmil
Crystal structure of dimeric chlorite dismutase variant R127K (CCld R127K) from Cyanothece sp. PCC7425
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Chlorite dismutase, DI(HYDROXYETHYL)ETHER, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2021-06-11
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Impact of the dynamics of the catalytic arginine on nitrite and chlorite binding by dimeric chlorite dismutase.
J.Inorg.Biochem., 227, 2021
7OUY
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BU of 7ouy by Molmil
Crystal structure of dimeric chlorite dismutase variant R127A (CCld R127A) from Cyanothece sp. PCC7425 in complex with nitrite
Descriptor: Chlorite dismutase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2021-06-14
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Impact of the dynamics of the catalytic arginine on nitrite and chlorite binding by dimeric chlorite dismutase.
J.Inorg.Biochem., 227, 2021
7OUV
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BU of 7ouv by Molmil
Crystal structure of human filamin C domains 14-15 cardiovascular disease causing mutation S1624L
Descriptor: Isoform 2 of Filamin-C
Authors:Mlynek, G, Djinovic-Carugo, K.
Deposit date:2021-06-13
Release date:2022-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Analysis and prediction of pathogenic missense variants in human filamin C
To Be Published
7OUU
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BU of 7ouu by Molmil
Crystal structure of human filamin C domains 14-15
Descriptor: Isoform 2 of Filamin-C
Authors:Mlynek, G, Djinovic-Carugo, K.
Deposit date:2021-06-13
Release date:2022-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Analysis and prediction of pathogenic missense variants in human filamin C
To Be Published
7P0E
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BU of 7p0e by Molmil
Crystal structure of human filamin C domains 14-15 cardiovascular disease causing mutation G1676R
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Isoform 2 of Filamin-C
Authors:Mlynek, G, Djinovic-Carugo, K.
Deposit date:2021-06-29
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Analysis and prediction of pathogenic missense variants in human filamin C
To Be Published
6SV3
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BU of 6sv3 by Molmil
Structure of coproheme-LmCpfC
Descriptor: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Ferrochelatase, GLYCEROL
Authors:Hofbauer, S, Helm, J, Djinovic-Carugo, K, Furtmueller, P.G.
Deposit date:2019-09-17
Release date:2019-12-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.64000869 Å)
Cite:Crystal structures and calorimetry reveal catalytically relevant binding mode of coproporphyrin and coproheme in coproporphyrin ferrochelatase.
Febs J., 287, 2020
5JIK
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BU of 5jik by Molmil
Crystal structure of HER2 binding IgG1-Fc (Fcab H10-03-6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Humm, A, Lobner, E, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-04-22
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
5JII
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BU of 5jii by Molmil
Crystal structure of human IgG1-Fc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ig gamma-1 chain C region, ...
Authors:Humm, A, Lobner, E, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-04-22
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
5JIH
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BU of 5jih by Molmil
Crystal structure of HER2 binding IgG1-Fc (Fcab STAB19)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Humm, A, Lobner, E, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-04-22
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.663 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
5K65
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BU of 5k65 by Molmil
Crystal structure of VEGF binding IgG1-Fc (Fcab CT6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Humm, A, Lobner, E, Kitzmuller, M, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-05-24
Release date:2017-09-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two-faced Fcab prevents polymerization with VEGF and reveals thermodynamics and the 2.15 angstrom crystal structure of the complex.
MAbs, 9, 2017
1WKU
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BU of 1wku by Molmil
High resolution structure of the human alpha-actinin isoform 3
Descriptor: Alpha-actinin 3
Authors:Franzot, G, Sjoblom, B, Gautel, M, Djinovic Carugo, K.
Deposit date:2004-06-08
Release date:2005-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the actin binding domain from alpha-actinin in its closed conformation: structural insight into phospholipid regulation of alpha-actinin
J.Mol.Biol., 348, 2005
5JWG
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BU of 5jwg by Molmil
Crystal structure of Porphyromonas endodontalis DPP11 in complex with dipeptide Arg-Asp
Descriptor: 1,2-ETHANEDIOL, ARGININE, ASPARTIC ACID, ...
Authors:Bezerra, G.A, Fedosyuk, S, Ohara-Nemoto, Y, Nemoto, T.K, Djinovic-Carugo, K.
Deposit date:2016-05-12
Release date:2017-06-14
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017
5JXF
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BU of 5jxf by Molmil
Crystal structure of Flavobacterium psychrophilum DPP11 in complex with dipeptide Arg-Asp
Descriptor: ARGININE, ASPARTIC ACID, Asp/Glu-specific dipeptidyl-peptidase, ...
Authors:Bezerra, G.A, Fedosyuk, S, Ohara-Nemoto, Y, Nemoto, T.K, Djinovic-Carugo, K.
Deposit date:2016-05-13
Release date:2017-06-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017
5JXK
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BU of 5jxk by Molmil
Crystal structure of Porphyromonas endodontalis DPP11
Descriptor: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION
Authors:Bezerra, G.A, Cornaciu, I, Hoffmann, G, Djinovic-Carugo, K, Marquez, J.A.
Deposit date:2016-05-13
Release date:2017-06-14
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017
5JY0
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BU of 5jy0 by Molmil
Crystal structure of Porphyromonas endodontalis DPP11 in complex with substrate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Asp/Glu-specific dipeptidyl-peptidase, LEU-ASP-VAL
Authors:Bezerra, G.A, Cornaciu, I, Hoffmann, G, Djinovic-Carugo, K, Marquez, J.A.
Deposit date:2016-05-13
Release date:2017-06-14
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017

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