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PDB: 241 results

4AMX
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CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride
Descriptor: 5-fluoro-beta-D-glucopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ...
Authors:Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
Deposit date:2012-03-14
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4AOA
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Biochemical properties and crystal structure of a novel beta- phenylalanine aminotransferase from Variovorax paradoxus
Descriptor: 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE, BETA-PHENYLALANINE AMINOTRANSFERASE, GLYCEROL
Authors:Crismaru, C.G, Wybenga, G.G, Szymanski, W, Wijma, H.J, Wu, B, deWildeman, S, Poelarends, G.J, Dijkstra, B.W, Janssen, D.B.
Deposit date:2012-03-25
Release date:2012-10-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Biochemical Properties and Crystal Structure of a Beta-Phenylalanine Aminotransferase from Variovorax Paradoxus.
Appl.Environ.Microbiol., 79, 2013
4AO9
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Biochemical properties and crystal structure of a novel beta- phenylalanine aminotransferase from Variovorax paradoxus
Descriptor: BETA-PHENYLALANINE AMINOTRANSFERASE, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
Authors:Crismaru, C.G, Wybenga, G.G, Szymanski, W, Wijma, H.J, Wu, B, deWildeman, S, Poelarends, G.J, Dijkstra, B.W, Janssen, D.B.
Deposit date:2012-03-25
Release date:2012-10-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biochemical Properties and Crystal Structure of a Novel Beta-Phenylalanine Aminotransferase from Variovorax Paradoxus
Appl.Environ.Microbiol., 79, 2013
4BAA
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Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
Descriptor: PHENYLALANINE AMMONIA-LYASE
Authors:Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
Deposit date:2012-09-12
Release date:2013-01-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
4AYG
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Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in orthorhombic apo-form
Descriptor: ACETIC ACID, CALCIUM ION, GLUCANSUCRASE, ...
Authors:Pijning, T, Vujicic-Zagar, A, Kralj, S, Dijkhuizen, L, Dijkstra, B.W.
Deposit date:2012-06-21
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexibility of Truncated and Full-Length Glucansucrase Gtf180 Enzymes from Lactobacillus Reuteri 180.
FEBS J., 281, 2014
4BAB
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Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
Descriptor: PHENYLALANINE AMINOMUTASE
Authors:Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
Deposit date:2012-09-12
Release date:2013-01-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
4AT0
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The crystal structure of 3-ketosteroid-delta4-(5alpha)-dehydrogenase from Rhodococcus jostii RHA1
Descriptor: 3-KETOSTEROID-DELTA4-5ALPHA-DEHYDROGENASE, ACETATE ION, CHLORIDE ION, ...
Authors:van Oosterwijk, N, Knol, J, Dijkhuizen, L, van der Geize, R, Dijkstra, B.W.
Deposit date:2012-05-03
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Catalytic Mechanism of 3-Ketosteroid-{Delta}4-(5Alpha)-Dehydrogenase from Rhodococcus Jostii Rha1 Genome.
J.Biol.Chem., 287, 2012
4BTH
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The LeuA146Trp,PheB24Tyr Double Mutant of the Quorum Quenching N-acyl Homoserine Lactone Acylase PvdQ Has an Altered Substrate Specificity Towards Small Acyl Chains
Descriptor: ACYL-HOMOSERINE LACTONE ACYLASE PVDQ SUBUNIT ALPHA, ACYL-HOMOSERINE LACTONE ACYLASE PVDQ SUBUNIT BETA, GLYCEROL
Authors:Koch, G, Nadal-Jimenez, P, Reis, C.R, Muntendam, R, Bokhove, M, Melillo, E, Dijkstra, B.W, Cool, R.H, Quax, W.J.
Deposit date:2013-06-18
Release date:2014-01-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Reducing Virulence of the Human Pathogen Burkholderia by Altering the Substrate Specificity of the Quorum-Quenching Acylase Pvdq
Proc.Natl.Acad.Sci.USA, 111, 2014
1PEZ
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Bacillus circulans strain 251 mutant A230V
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
Authors:Rozeboom, H.J, Dijkstra, B.W.
Deposit date:2003-05-23
Release date:2003-10-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Conversion of Cyclodextrin Glycosyltransferase into a Starch Hydrolase by Directed Evolution: The Role of Alanine 230 in Acceptor Subsite +1
Biochemistry, 42, 2003
1PJ9
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Bacillus circulans strain 251 loop mutant 183-195
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, CALCIUM ION, ...
Authors:Rozeboom, H.J, Dijkstra, B.W.
Deposit date:2003-06-02
Release date:2004-02-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Improved thermostability of bacillus circulans cyclodextrin glycosyltransferase by the introduction of a salt bridge
PROTEINS: STRUCT.,FUNCT.,GENET., 54, 2004
1PX0
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Crystal structure of the haloalcohol dehalogenase HheC complexed with the haloalcohol mimic (R)-1-para-nitro-phenyl-2-azido-ethanol
Descriptor: (R)-1-PARA-NITRO-PHENYL-2-AZIDO-ETHANOL, halohydrin dehalogenase
Authors:de Jong, R.M, Tiesinga, J.J.W, Rozeboom, H.J, Kalk, K.H, Tang, L, Janssen, D.B, Dijkstra, B.W.
Deposit date:2003-07-02
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Mechanism of a Bacterial Haloalcohol Dehalogenase: a new variation of the short-chain dehydrogenase/reductase fold without an NAD(P)H binding site
EMBO J., 22, 2003
4CVB
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BU of 4cvb by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes
Descriptor: ALCOHOL DEHYDROGENASE, CALCIUM ION, CHLORIDE ION, ...
Authors:Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
Deposit date:2014-03-25
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4CVC
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BU of 4cvc by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes with zinc in the active site
Descriptor: ALCOHOL DEHYDROGENASE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
Deposit date:2014-03-25
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
1OXX
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BU of 1oxx by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, IODIDE ION
Authors:Verdon, G, Albers, S.-V, van Oosterwijk, N, Dijkstra, B.W, Driessen, A.J.M, Thunnissen, A.M.W.H.
Deposit date:2003-04-03
Release date:2003-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus
J.Mol.Biol., 334, 2003
1NWR
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Crystal structure of human cartilage gp39 (HC-gp39)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1
Authors:Fusetti, F, Pijning, T, Kalk, K.H, Bos, E, Dijkstra, B.W.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure and Carbohydrate-binding Properties of the Human Cartilage Glycoprotein-39
J.Biol.Chem., 278, 2003
1QSA
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CRYSTAL STRUCTURE OF THE 70 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70 FROM ESCHERICHIA COLI AT 1.65 ANGSTROMS RESOLUTION
Descriptor: ACETATE ION, GLYCEROL, PROTEIN (SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70), ...
Authors:van Asselt, E.J, Thunnissen, A.-M.W.H, Dijkstra, B.W.
Deposit date:1999-06-20
Release date:1999-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:High resolution crystal structures of the Escherichia coli lytic transglycosylase Slt70 and its complex with a peptidoglycan fragment.
J.Mol.Biol., 291, 1999
1OT2
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Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant D135N
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
Authors:Rozeboom, H.J, Dijkstra, B.W.
Deposit date:2003-03-21
Release date:2003-06-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The fully conserved Asp residue in Conserved sequence region I of the alpha-amylase Family is crucial for the Catalytic Site Architecture and Activity
Febs Lett., 541, 2003
1OT1
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Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant D135A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
Authors:Rozeboom, H.J, Dijkstra, B.W.
Deposit date:2003-03-21
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The fully conserved Asp residue in Conserved sequence region I of the alpha-amylase Family is crucial for the Catalytic Site Architecture and Activity
Febs Lett., 541, 2003
1NX9
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Acetobacter turbidans alpha-amino acid ester hydrolase S205A mutant complexed with ampicillin
Descriptor: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, GLYCEROL, alpha-amino acid ester hydrolase
Authors:Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Janssen, D.B, Dijkstra, B.W.
Deposit date:2003-02-10
Release date:2004-03-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Acetobacter turbidans {alpha}-Amino Acid Ester Hydrolase: HOW A SINGLE MUTATION IMPROVES AN ANTIBIOTIC-PRODUCING ENZYME.
J.Biol.Chem., 281, 2006
4CQ5
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Structural Investigations into the Stereochemistry and Activity of a Phenylalanine-2,3-Aminomutase from Taxus chinensis
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHENYLALANINE AMINOMUTASE, ...
Authors:Wybenga, G.G, Szymanski, W, Wu, B, Feringa, B.L, Janssen, D.B, Dijkstra, B.W.
Deposit date:2014-02-11
Release date:2014-05-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Investigations Into the Stereochemistry and Activity of a Phenylalanine-2,3-Aminomutase from Taxus Chinensis.
Biochemistry, 53, 2014
1PWX
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Crystal structure of the haloalcohol dehalogenase HheC complexed with bromide
Descriptor: BROMIDE ION, halohydrin dehalogenase
Authors:de Jong, R.M, Tiesinga, J.J.W, Rozeboom, H.J, Kalk, K.H, Tang, L, Janssen, D.B, Dijkstra, B.W.
Deposit date:2003-07-02
Release date:2003-10-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Mechanism of a Bacterial Haloalcohol Dehalogenase: a new variation of the short-chain dehydrogenase/reductase fold without an NAD(P)H binding site
EMBO J., 22, 2003
1NWT
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Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitopentaose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fusetti, F, Pijning, T, Kalk, K.H, Bos, E, Dijkstra, B.W.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and carbohydrate-binding properties of the human cartilage glycoprotein-39
J.Biol.Chem., 278, 2003
1QTE
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CRYSTAL STRUCTURE OF THE 70 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70 FROM ESCHERICHIA COLI AT 1.90 A RESOLUTION IN COMPLEX WITH A 1,6-ANHYDROMUROTRIPEPTIDE
Descriptor: 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:van Asselt, E.J, Thunnissen, A.-M.W.H, Dijkstra, B.W.
Deposit date:1999-06-27
Release date:1999-08-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High resolution crystal structures of the Escherichia coli lytic transglycosylase Slt70 and its complex with a peptidoglycan fragment.
J.Mol.Biol., 291, 1999
1NWU
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Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitotetraose
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fusetti, F, Pijning, T, Kalk, K.H, Bos, E, Dijkstra, B.W.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and carbohydrate-binding properties of the human cartilage glycoprotein-39
J.Biol.Chem., 278, 2003
1NWS
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Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1
Authors:Fusetti, F, Pijning, T, Kalk, K.H, Dijkstra, B.W.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and carbohydrate-binding properties of the human cartilage glycoprotein-39
J.Biol.Chem., 278, 2003

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