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PDB: 142 results

7VK8
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BU of 7vk8 by Molmil
Crystal structure of SARS-CoV-2 Mpro at 2.4 A Resolution
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Usta, G.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK6
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BU of 7vk6 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.25 A resolution-13
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Yuksel, B.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VJY
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BU of 7vjy by Molmil
Crystal Structure of Sars-Cov-2 Mpro at 1.90 A resolution-1
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Johnson, A.J.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK3
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BU of 7vk3 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.10 A resolution-2
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Guven, O.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VJX
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BU of 7vjx by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.20 A resolution-12
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Usta, G.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK4
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BU of 7vk4 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.10 A resolution-3
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Buyukdag, C.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VJW
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BU of 7vjw by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.20 A resolution-10
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Ayan, E.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK5
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BU of 7vk5 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.10 A resolution-8
Descriptor: 3C-like proteinase
Authors:DeMirci, H, Gocenler, O.
Deposit date:2021-09-29
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
5WNU
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BU of 5wnu by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
Authors:DeMirci, H.
Deposit date:2017-08-01
Release date:2018-02-21
Last modified:2020-10-21
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
3CJQ
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BU of 3cjq by Molmil
Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11 in space group P212121
Descriptor: 50S ribosomal protein L11, IODIDE ION, N,N-dimethyl-L-methionine, ...
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
3CJT
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BU of 3cjt by Molmil
Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11
Descriptor: 1,2-ETHANEDIOL, 50S ribosomal protein L11, CHLORIDE ION, ...
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
3CJS
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BU of 3cjs by Molmil
Minimal Recognition Complex between PrmA and Ribosomal Protein L11
Descriptor: 1,2-ETHANEDIOL, 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
3DMG
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BU of 3dmg by Molmil
T. Thermophilus 16S rRNA N2 G1207 methyltransferase (RsmC) in complex with AdoHcy
Descriptor: Probable ribosomal RNA small subunit methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-07-01
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of the Thermus thermophilus 16 S rRNA Methyltransferase RsmC in Complex with Cofactor and Substrate Guanosine.
J.Biol.Chem., 283, 2008
3DMF
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BU of 3dmf by Molmil
T. Thermophilus 16S rRNA N2 G1207 methyltransferase (RsmC) in complex with AdoMet
Descriptor: Probable ribosomal RNA small subunit methyltransferase, S-ADENOSYLMETHIONINE, SULFATE ION
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-07-01
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal Structure of the Thermus thermophilus 16 S rRNA Methyltransferase RsmC in Complex with Cofactor and Substrate Guanosine.
J.Biol.Chem., 283, 2008
7CWB
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BU of 7cwb by Molmil
Ambient-Temperature Serial Femtosecond X-ray Crystal structure of SARS-CoV-2 Main Protease at 1.9 A Resolution (C121)
Descriptor: 3C-like proteinase
Authors:DeMirci, H.
Deposit date:2020-08-27
Release date:2020-09-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Near-physiological-temperature serial crystallography reveals conformations of SARS-CoV-2 main protease active site for improved drug repurposing.
Structure, 29, 2021
7CWC
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BU of 7cwc by Molmil
Ambient-Temperature Serial Femtosecond X-ray Crystal structure of SARS-CoV-2 Main Protease at 2.1 A Resolution (P212121)
Descriptor: 3C-like proteinase
Authors:DeMirci, H.
Deposit date:2020-08-27
Release date:2020-09-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Near-physiological-temperature serial crystallography reveals conformations of SARS-CoV-2 main protease active site for improved drug repurposing.
Structure, 29, 2021
3G8A
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BU of 3g8a by Molmil
T. thermophilus 16S rRNA G527 methyltransferase in complex with AdoHcy in space group P61
Descriptor: Ribosomal RNA small subunit methyltransferase G, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Demirci, H, Gregory, S.T, Belardinelli, R, Gualerzi, C, Dahlberg, A.E, Jogl, G.
Deposit date:2009-02-11
Release date:2009-06-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional studies of the Thermus thermophilus 16S rRNA methyltransferase RsmG
Rna, 15, 2009
3FUX
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BU of 3fux by Molmil
T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in complex with 5'-methylthioadenosine in space group P212121
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Dimethyladenosine transferase
Authors:Demirci, H, Belardinelli, R, Seri, E, Gregory, S.T, Gualerzi, C, Dahlberg, A.E, Jogl, G.
Deposit date:2009-01-14
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural rearrangements in the active site of the Thermus thermophilus 16S rRNA methyltransferase KsgA in a binary complex with 5'-methylthioadenosine.
J.Mol.Biol., 388, 2009
3G89
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BU of 3g89 by Molmil
T. thermophilus 16S rRNA G527 methyltransferase in complex with AdoMet and AMP in space group P61
Descriptor: ADENOSINE MONOPHOSPHATE, Ribosomal RNA small subunit methyltransferase G, S-ADENOSYLMETHIONINE
Authors:Demirci, H, Gregory, S.T, Belardinelli, R, Gualerzi, C, Dahlberg, A.E, Jogl, G.
Deposit date:2009-02-11
Release date:2009-06-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and functional studies of the Thermus thermophilus 16S rRNA methyltransferase RsmG
Rna, 15, 2009
3G88
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BU of 3g88 by Molmil
T. thermophilus 16S rRNA G527 methyltransferase in complex with AdoMet in space group P61
Descriptor: DI(HYDROXYETHYL)ETHER, Ribosomal RNA small subunit methyltransferase G, S-ADENOSYLMETHIONINE
Authors:Demirci, H, Belardinelli, R, Gregory, S.T, Gualerzi, C, Dahlberg, A.E, Jogl, G.
Deposit date:2009-02-11
Release date:2009-06-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and functional studies of the Thermus thermophilus 16S rRNA methyltransferase RsmG
Rna, 15, 2009
3CJR
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BU of 3cjr by Molmil
Ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11 (K39A) and inhibitor Sinefungin.
Descriptor: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase, SINEFUNGIN
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008
7DUL
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BU of 7dul by Molmil
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
Authors:DeMirci, H, Destan, E.
Deposit date:2021-01-09
Release date:2022-01-26
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound
To Be Published
7DUH
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BU of 7duh by Molmil
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound
Descriptor: 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:DeMirci, H, Destan, E.
Deposit date:2021-01-09
Release date:2022-01-26
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound
to be published
7DUK
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BU of 7duk by Molmil
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''MS bound
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
Authors:DeMirci, H, Destan, E.
Deposit date:2021-01-09
Release date:2022-01-12
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''MS bound
to be published
7DUG
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BU of 7dug by Molmil
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS bound
Descriptor: 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:DeMirci, H, Destan, E.
Deposit date:2021-01-09
Release date:2022-01-12
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS bound
to be published

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