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PDB: 35 results

2PXZ
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BU of 2pxz by Molmil
E. coli phosphoenolpyruvate carboxykinase (PEPCK) complexed with ATP, Mg2+, Mn2+, carbon dioxide and oxaloacetate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARBON DIOXIDE, MAGNESIUM ION, ...
Authors:Delbaere, L.T.J, Cotelesage, J.J.H, Goldie, H.
Deposit date:2007-05-14
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of E. coli phosphoenolpyruvate carboxykinase (PEPCK) complexed with ATP, Mg2+, Mn2+, carbon dioxide and oxaloacetate
To be Published
1SGC
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BU of 1sgc by Molmil
THE 1.8 ANGSTROMS STRUCTURE OF THE COMPLEX BETWEEN CHYMOSTATIN AND STREPTOMYCES GRISEUS PROTEASE A. A MODEL FOR SERINE PROTEASE CATALYTIC TETRAHEDRAL INTERMEDIATES
Descriptor: CHYMOSTATIN A, PROTEINASE A
Authors:Delbaere, L.T.J, Brayer, G.D.
Deposit date:1986-04-18
Release date:1986-07-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.8 A structure of the complex between chymostatin and Streptomyces griseus protease A. A model for serine protease catalytic tetrahedral intermediates.
J.Mol.Biol., 183, 1985
2O8L
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BU of 2o8l by Molmil
Structure of V8 protease from staphylococcus aureus
Descriptor: POTASSIUM ION, V8 protease
Authors:Delbaere, L.T.J, Prasad, L, Leduc, Y.
Deposit date:2006-12-12
Release date:2007-01-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Structure of a Universally Employed Enazyme: V8 Protease from Staphylococcus Aureus
Acta Crystallogr.,Sect.D, 60, 2004
1YTM
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BU of 1ytm by Molmil
Crystal structure of phosphoenolpyruvate carboxykinase of Anaerobiospirillum succiniciproducens complexed with ATP, oxalate, magnesium and manganese ions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Delbaere, L.T.J, Cotelesage, J.J.H.
Deposit date:2005-02-10
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Anaerobiospirillum succiniciproducens PEP carboxykinase reveals an important active site loop
Int.J.Biochem.Cell Biol., 37, 2005
2PY7
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BU of 2py7 by Molmil
Crystal structure of E. coli phosphoenolpyruvate carboxykinase mutant Lys213Ser complexed with ATP-Mg2+-Mn2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Delbaere, L.T.J, Cotelesage, J.J.H, Goldie, H.
Deposit date:2007-05-15
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of E. coli phosphoenolpyruvate carboxykinase mutant Lys213Ser
To be Published
1GSL
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BU of 1gsl by Molmil
LECTIN (FOURTH ISOLATED FROM (GRIFFONIA SIMPLICIFOLIA)) COMPLEX WITH Y HUMAN BLOOD GROUP DETERMINANT
Descriptor: CALCIUM ION, GRIFFONIA SIMPLICIFOLIA LECTIN 4, MANGANESE (II) ION, ...
Authors:Delbaere, L.T.J.
Deposit date:1996-06-15
Release date:1996-12-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the lectin IV of Griffonia simplicifolia and its complex with the Lewis b human blood group determinant at 2.0 A resolution.
J.Mol.Biol., 230, 1993
2JEL
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BU of 2jel by Molmil
JEL42 FAB/HPR COMPLEX
Descriptor: HISTIDINE-CONTAINING PROTEIN, JEL42 FAB FRAGMENT, SULFATE ION
Authors:Prasad, L, Waygood, E.B, Lee, J.S, Delbaere, L.T.J.
Deposit date:1998-02-24
Release date:1998-05-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The 2.5 A resolution structure of the jel42 Fab fragment/HPr complex
J.Mol.Biol., 280, 1998
2ZCI
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BU of 2zci by Molmil
Structure of a GTP-dependent bacterial PEP-carboxykinase from Corynebacterium glutamicum
Descriptor: Phosphoenolpyruvate carboxykinase [GTP]
Authors:Aich, S, Prasad, L, Delbaere, L.T.J.
Deposit date:2007-11-09
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a GTP-dependent bacterial PEP-carboxykinase from Corynebacterium glutamicum.
Int.J.Biochem.Cell Biol., 40, 2008
3CCD
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BU of 3ccd by Molmil
1.0 A Structure of Post-Succinimide His15Asp HPr
Descriptor: Phosphocarrier protein HPr, SULFATE ION
Authors:Napper, S, Prasad, L, Delbaere, L.T.J.
Deposit date:2008-02-25
Release date:2008-10-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural investigation of a phosphorylation-catalyzed, isoaspartate-free, protein succinimide: crystallographic structure of post-succinimide His15Asp histidine-containing protein
Biochemistry, 47, 2008
2ALP
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BU of 2alp by Molmil
REFINED STRUCTURE OF ALPHA-LYTIC PROTEASE AT 1.7 ANGSTROMS RESOLUTION. ANALYSIS OF HYDROGEN BONDING AND SOLVENT STRUCTURE
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION
Authors:Fujinaga, M, Delbaere, L.T.J, Brayer, G.D, James, M.N.G.
Deposit date:1985-03-07
Release date:1985-07-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined structure of alpha-lytic protease at 1.7 A resolution. Analysis of hydrogen bonding and solvent structure.
J.Mol.Biol., 184, 1985
3MBC
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BU of 3mbc by Molmil
Crystal structure of monomeric isocitrate dehydrogenase from Corynebacterium glutamicum in complex with NADP
Descriptor: Isocitrate dehydrogenase [NADP], MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Sidhu, N.S, Aich, S, Sheldrick, G.M, Delbaere, L.T.J.
Deposit date:2010-03-25
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a highly NADP+-specific isocitrate dehydrogenase.
Acta Crystallogr.,Sect.D, 67, 2011
2VC6
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BU of 2vc6 by Molmil
Structure of MosA from S. meliloti with pyruvate bound
Descriptor: DIHYDRODIPICOLINATE SYNTHASE
Authors:Phenix, C.P, Nienaber, K.H, Tam, P.H, Delbaere, L.T.J, Palmer, D.R.J.
Deposit date:2007-09-18
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural, functional and calorimetric investigation of MosA, a dihydrodipicolinate synthase from Sinorhizobium meliloti l5-30, does not support involvement in rhizopine biosynthesis.
Chembiochem, 9, 2008
1AQ2
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BU of 1aq2 by Molmil
PHOSPHOENOLPYRUVATE CARBOXYKINASE
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Tari, L.W, Matte, A, Goldie, H, Delbaere, L.T.J.
Deposit date:1997-08-05
Release date:1998-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mg(2+)-Mn2+ clusters in enzyme-catalyzed phosphoryl-transfer reactions.
Nat.Struct.Biol., 4, 1997
2B0T
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BU of 2b0t by Molmil
Structure of Monomeric NADP Isocitrate dehydrogenase
Descriptor: MAGNESIUM ION, NADP Isocitrate dehydrogenase
Authors:Imabayashi, F, Aich, S, Prasad, L, Delbaere, L.T.
Deposit date:2005-09-14
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Substrate-free structure of a monomeric NADP isocitrate dehydrogenase: An open conformation phylogenetic relationship of isocitrate dehydrogenase.
Proteins, 63, 2006
1AYL
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BU of 1ayl by Molmil
PHOSPHOENOLPYRUVATE CARBOXYKINASE
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, OXALATE ION, ...
Authors:Tari, L.W, Pugazenthi, U, Goldie, H, Delbaere, L.T.J.
Deposit date:1995-12-07
Release date:1997-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Snapshot of an enzyme reaction intermediate in the structure of the ATP-Mg2+-oxalate ternary complex of Escherichia coli PEP carboxykinase.
Nat.Struct.Biol., 3, 1996
1LIN
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BU of 1lin by Molmil
CALMODULIN COMPLEXED WITH TRIFLUOPERAZINE (1:4 COMPLEX)
Descriptor: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, CALMODULIN
Authors:Vandonselaar, M, Hickie, R.A, Quail, J.W, Delbaere, L.T.J.
Deposit date:1995-10-11
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trifluoperazine-induced conformational change in Ca(2+)-calmodulin.
Nat.Struct.Biol., 1, 1994
1CM2
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BU of 1cm2 by Molmil
STRUCTURE OF HIS15ASP HPR AFTER HYDROLYSIS OF RINGED SPECIES.
Descriptor: HISTIDINE-CONTAINING PROTEIN
Authors:Napper, S, Delbaere, L.T.J, Waygood, E.B.
Deposit date:1999-05-13
Release date:2000-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The aspartyl replacement of the active site histidine in histidine-containing protein, HPr, of the Escherichia coli Phosphoenolpyruvate:Sugar phosphotransferase system can accept and donate a phosphoryl group. Spontaneous dephosphorylation of acyl-phosphate autocatalyzes an internal cyclization
J.Biol.Chem., 274, 1999
1CM3
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BU of 1cm3 by Molmil
HIS15ASP HPR FROM E. COLI
Descriptor: HISTIDINE-CONTAINING PROTEIN
Authors:Napper, S, Waygood, E.B, Delbaere, L.T.J.
Deposit date:1999-05-13
Release date:2000-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The aspartyl replacement of the active site histidine in histidine-containing protein, HPr, of the Escherichia coli Phosphoenolpyruvate:Sugar phosphotransferase system can accept and donate a phosphoryl group. Spontaneous dephosphorylation of acyl-phosphate autocatalyzes an internal cyclization
J.Biol.Chem., 274, 1999
1K3D
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BU of 1k3d by Molmil
Phosphoenolpyruvate carboxykinase in complex with ADP and AlF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Sudom, A.M, Prasad, L, Goldie, H, Delbaere, L.T.J.
Deposit date:2001-10-02
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The phosphoryl-transfer mechanism of Escherichia coli phosphoenolpyruvate carboxykinase from the use of AlF(3).
J.Mol.Biol., 314, 2001
1K3C
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BU of 1k3c by Molmil
Phosphoenolpyruvate carboxykinase in complex with ADP, AlF3 and Pyruvate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Sudom, A.M, Prasad, L, Goldie, H, Delbaere, L.T.J.
Deposit date:2001-10-02
Release date:2001-12-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The phosphoryl-transfer mechanism of Escherichia coli phosphoenolpyruvate carboxykinase from the use of AlF(3).
J.Mol.Biol., 314, 2001
1WVQ
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BU of 1wvq by Molmil
Structure of conserved hypothetical protein PAE2307 from Pyrobaculum aerophilum
Descriptor: PHOSPHATE ION, hypothetical protein PAE2307
Authors:Lott, J.S, Delbaere, L.T, Banfield, M.J, Sigrell-Simon, J.A, Baker, E.N.
Deposit date:2004-12-24
Release date:2006-01-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structure of an ancient conserved domain establishes a structural basis for stable histidine phosphorylation and identifies a new family of adenosine-specific kinases.
J.Biol.Chem., 281, 2006
1YLH
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BU of 1ylh by Molmil
Crystal Structure of Phosphoenolpyruvate Carboxykinase from Actinobaccilus succinogenes in Complex with Manganese and Pyruvate
Descriptor: (2S,3S)-2,3-DIHYDROXY-4-SULFANYLBUTANE-1-SULFONATE, BETA-MERCAPTOETHANOL, FORMIC ACID, ...
Authors:Leduc, Y.A, Prasad, L, Laivenieks, M, Zeikus, J.G, Delbaere, L.T.
Deposit date:2005-01-19
Release date:2005-06-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of PEP carboxykinase from the succinate-producing Actinobacillus succinogenes: a new conserved active-site motif.
Acta Crystallogr.,Sect.D, 61, 2005
2OLR
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BU of 2olr by Molmil
Crystal structure of Escherichia coli phosphoenolpyruvate carboxykinase complexed with carbon dioxide, Mg2+, ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARBON DIOXIDE, CHLORIDE ION, ...
Authors:Cotelesage, J.J, Delbaere, L.T, Goldie, H, Puttick, J, Rajabi, B, Novakovski, B.
Deposit date:2007-01-19
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:How does an enzyme recognize CO2?
Int.J.Biochem.Cell Biol., 39, 2007
1YGG
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BU of 1ygg by Molmil
Crystal structure of phosphoenolpyruvate carboxykinase from Actinobacillus succinogenes
Descriptor: SODIUM ION, SULFATE ION, phosphoenolpyruvate carboxykinase
Authors:Leduc, Y.A, Prasad, L, Laivenieks, M, Zeikus, J.G, Delbaere, L.T.
Deposit date:2005-01-04
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of PEP carboxykinase from the succinate-producing Actinobacillus succinogenes: a new conserved active-site motif.
Acta Crystallogr.,Sect.D, 61, 2005
2OLQ
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How Does an Enzyme Recognize CO2?
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARBON DIOXIDE, MAGNESIUM ION, ...
Authors:Puttick, J, Goldie, H, Cotelesage, J.J, Rajabi, B, Novakovski, B, Delbaere, L.T.
Deposit date:2007-01-19
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:How does an enzyme recognize CO2?
Int.J.Biochem.Cell Biol., 39, 2007

 

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