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PDB: 5 results

5U6E
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BU of 5u6e by Molmil
Crystal structure of clade A/E HIV-1 gp120 core in complex with NBD-14010
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-{(1S)-2-amino-1-[5-(hydroxymethyl)-4-methyl-1,3-thiazol-2-yl]ethyl}-5-(4-chloro-3-fluorophenyl)-1H-pyrrole-2-carboxamide, ...
Authors:Kwon, Y.D, Debnath, A.K, Kwong, P.D.
Deposit date:2016-12-07
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Synthesis, Antiviral Potency, in Vitro ADMET, and X-ray Structure of Potent CD4 Mimics as Entry Inhibitors That Target the Phe43 Cavity of HIV-1 gp120.
J. Med. Chem., 60, 2017
2L6E
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NMR Structure of the monomeric mutant C-terminal domain of HIV-1 Capsid in complex with stapled peptide Inhibitor
Descriptor: Capsid protein p24, NYAD-13 stapled peptide inhibitor
Authors:Bhattacharya, S, Zhang, H, Debnath, A.K, Cowburn, D.
Deposit date:2010-11-18
Release date:2010-12-29
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Solution structure of a hydrocarbon stapled peptide inhibitor in complex with monomeric C-terminal domain of HIV-1 capsid.
J.Biol.Chem., 283, 2008
4RZ8
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BU of 4rz8 by Molmil
Crystal structure of HIV-1 gp120 core in complex with NBD-11021, a small molecule CD4-antagonist
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-(4-chlorophenyl)-N-{(S)-[5-(hydroxymethyl)-4-methyl-1,3-thiazol-2-yl][(2R)-piperidin-2-yl]methyl}-1H-pyrrole-2-carboxamide, ...
Authors:Kwon, Y.D, Debnath, A.K, Kwong, P.D.
Deposit date:2014-12-18
Release date:2015-09-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Design of a Small Molecule CD4-Antagonist with Broad Spectrum Anti-HIV-1 Activity.
J.Med.Chem., 58, 2015
4DKV
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BU of 4dkv by Molmil
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-10007
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HIV-1 gp120 core, ...
Authors:Kwon, Y.D, Debnath, A.K, Kwong, P.D.
Deposit date:2012-02-04
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1847 Å)
Cite:Binding mode characterization of NBD series CD4-mimetic HIV-1 entry inhibitors by X-ray structure and resistance study.
Antimicrob. Agents Chemother., 58, 2014
4DKU
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BU of 4dku by Molmil
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-09027
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HIV-1 gp120 core, ...
Authors:Kwon, Y.D, Debnath, A.K, Kwong, P.D.
Deposit date:2012-02-04
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4902 Å)
Cite:Binding mode characterization of NBD series CD4-mimetic HIV-1 entry inhibitors by X-ray structure and resistance study.
Antimicrob. Agents Chemother., 58, 2014

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