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PDB: 142 件
8ZCM
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BU of 8zcm by Molmil
Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Immunoglobulin gamma-1 heavy chain, ...
著者Destan, E, DeMirci, H.
登録日2024-04-30
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
To Be Published
8ZCK
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BU of 8zck by Molmil
Serial Femtosecond Crystallography Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Destan, E, DeMirci, H.
登録日2024-04-30
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Serial Femtosecond Crystallography Structure of Fc Fragment of Human IgG1 from VEGF-Trap
To Be Published
8ZCL
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BU of 8zcl by Molmil
Ambient Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Destan, E, DeMirci, H.
登録日2024-04-30
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Ambient Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
To Be Published
8WZU
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BU of 8wzu by Molmil
4-hydroxybutyryl-CoA Synthetase (ADP-forming) from Nitrosopumilus maritimus.
分子名称: 4-hydroxybutyrate--CoA ligase [ADP-forming], SULFATE ION
著者Johnson, J, Demirci, H.
登録日2023-11-02
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of 4-hydroxybutyryl CoA synthetase (ADP-forming): A Key Enzyme in the Thaumarchaeal Hydroxypropionate/Hydroxybutyrate cycle.
To Be Published
5BR8
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BU of 5br8 by Molmil
Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Sierra, R.G, Gati, C, Laksmono, H, Dao, E.H, Gul, S, Fuller, F, Kern, J, Chatterjee, R, Ibrahim, M, Brewster, A, Young, I.D, Michels-Clark, T, Aquila, A, Mengning, L, Hunter, M.S, Koglin, J.E, Boutet, S, Junco, E.A, Hayes, B, Bogan, M.J, Hampton, C.Y, Puglisi, E.V, Sauter, N.K, Stan, C.A, Zouni, A, Yano, J, Yachandra, V.K, Soltis, S.M, Puglisi, J.D, DeMirci, H.
登録日2015-05-29
公開日2015-11-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin
To Be Published
8HZ1
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BU of 8hz1 by Molmil
Ambient temperature crystal structure of Escherichia coli CyaY
分子名称: Iron-sulfur cluster assembly protein CyaY
著者Shafiei, A, DeMirci, H.
登録日2023-01-07
公開日2023-01-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ambient temperature crystal structure of Escherichia coli CyaY
To Be Published
8IWI
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BU of 8iwi by Molmil
Cryogenic Temperature Crystal Structure of Escherichia coli CyaY protein at pH 5
分子名称: Iron-sulfur cluster assembly protein CyaY
著者Shafiei, A, DeMirci, H.
登録日2023-03-30
公開日2023-05-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Cryogenic Temperature Crystal Structure of Escherichia coli CyaY protein at pH 5
To Be Published
8IVK
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BU of 8ivk by Molmil
Cryogenic temperature crystal structure of Escherichia coli CyaY
分子名称: Iron-sulfur cluster assembly protein CyaY
著者Shafiei, A, DeMirci, H.
登録日2023-03-28
公開日2023-05-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Cryogenic temperature crystal structure of Escherichia coli CyaY
To Be Published
8X6P
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BU of 8x6p by Molmil
Isomerase Protein
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, SULFATE ION
著者Guven, O, Demirci, H.
登録日2023-11-21
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Isomerase Protein
To Be Published
8X34
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BU of 8x34 by Molmil
ProteinMY
分子名称: Kelch-like ECH-associated protein 1
著者Yilmaz, M, Gul, M, Tavli, S, Okuducu, C, Gul, B, DeMirci, H.
登録日2023-11-11
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Human KEAP1 Kelch domain at ambient temperature
To Be Published
4GKJ
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BU of 4gkj by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial anticodon stem loop (ASL) of transfer RNA Methionine (TRNAMET) bound to an mRNA with an AUG-codon in the A-site and paromomycin.
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, Murphy IV, F.V, Spears, J.L, Demirci, H, Agris, P.F.
登録日2012-08-11
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.298 Å)
主引用文献Expanded use of sense codons is regulated by modified cytidines in tRNA.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GKK
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BU of 4gkk by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial anticodon stem loop (ASL) of transfer RNA Methionine (TRNAMET) bound to an mRNA with an AUA-codon in the A-site and paromomycin
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, Murphy IV, F.V, Spears, J.L, Demirci, H, Agris, P.F.
登録日2012-08-11
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Expanded use of sense codons is regulated by modified cytidines in tRNA.
Proc.Natl.Acad.Sci.USA, 110, 2013
6MPI
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BU of 6mpi by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a 2-thiocytidine (s2C32) and inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 1 (TRNAARG1) bound to an mRNA with an CGU-codon in the A-site and paromomycin
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, DeMirci, H, Agris, P.F.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.
J.Mol.Biol., 432, 2020
6MKN
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BU of 6mkn by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, DeMirci, H, Agris, P.F.
登録日2018-09-25
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.
J.Mol.Biol., 432, 2020
6MPF
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BU of 6mpf by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a 2-thiocytidine (s2C32) and inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 1 (TRNAARG1) bound to an mRNA with an CGC-codon in the A-site and paromomycin
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, DeMirci, H, Agris, P.F.
登録日2018-10-05
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.
J.Mol.Biol., 432, 2020
7YKN
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BU of 7ykn by Molmil
Crystal structure of (6-4) photolyase from Vibrio cholerae
分子名称: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, Cryptochrome/photolyase family protein, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Cakilkaya, B, Kavakli, I.H, DeMirci, H.
登録日2022-07-23
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of Vibrio cholerae (6-4) photolyase reveals interactions with cofactors and a DNA-binding region.
J.Biol.Chem., 299, 2023
6DTI
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BU of 6dti by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin
分子名称: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, DeMirci, H, Agris, P.F.
登録日2018-06-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.54 Å)
主引用文献A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.
J.Mol.Biol., 432, 2020

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