5WWP
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![BU of 5wwp by Molmil](/molmil-images/mine/5wwp) | Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13) | Descriptor: | ORF1ab, SULFATE ION, ZINC ION | Authors: | Hao, W, Wojdyla, J.A, Zhao, R, Han, R, Das, R, Zlatev, I, Manoharan, M, Wang, M, Cui, S. | Deposit date: | 2017-01-03 | Release date: | 2017-07-05 | Last modified: | 2021-09-15 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Crystal structure of Middle East respiratory syndrome coronavirus helicase PLoS Pathog., 13, 2017
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6DVK
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![BU of 6dvk by Molmil](/molmil-images/mine/6dvk) | Computationally designed mini tetraloop-tetraloop receptor by the RNAMake program - construct 6 (miniTTR 6) | Descriptor: | COBALT (II) ION, MAGNESIUM ION, RNA (95-MER) | Authors: | Eiler, D.R, Yesselman, J.D, Costantino, D.A, Das, R, Kieft, J.S. | Deposit date: | 2018-06-24 | Release date: | 2019-06-26 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Computational design of three-dimensional RNA structure and function. Nat Nanotechnol, 14, 2019
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7EZ2
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![BU of 7ez2 by Molmil](/molmil-images/mine/7ez2) | Holo L-16 ScaI Tetrahymena ribozyme | Descriptor: | Holo L-16 ScaI Tetrahymena ribozyme, Holo L-16 ScaI Tetrahymena ribozyme S1, Holo L-16 ScaI Tetrahymena ribozyme S2, ... | Authors: | Su, Z, Zhang, K, Kappel, K, Luo, B, Das, R, Chiu, W. | Deposit date: | 2021-06-01 | Release date: | 2021-08-25 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.05 Å) | Cite: | Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 angstrom resolution. Nature, 596, 2021
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7F0N
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![BU of 7f0n by Molmil](/molmil-images/mine/7f0n) | |
7EZ0
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![BU of 7ez0 by Molmil](/molmil-images/mine/7ez0) | Apo L-21 ScaI Tetrahymena ribozyme | Descriptor: | Apo L-21 ScaI Tetrahymena ribozyme, MAGNESIUM ION | Authors: | Su, Z, Zhang, K, Kappel, K, Luo, B, Das, R, Chiu, W. | Deposit date: | 2021-06-01 | Release date: | 2021-08-25 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.14 Å) | Cite: | Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 angstrom resolution. Nature, 596, 2021
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6J4I
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![BU of 6j4i by Molmil](/molmil-images/mine/6j4i) | |
6IWJ
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![BU of 6iwj by Molmil](/molmil-images/mine/6iwj) | A designed domain swapped dimer | Descriptor: | Archeal Protein MK0293 | Authors: | Nandwani, N, Negi, H, Das, R. | Deposit date: | 2018-12-05 | Release date: | 2019-02-13 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | A five-residue motif for the design of domain swapping in proteins. Nat Commun, 10, 2019
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6K5R
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![BU of 6k5r by Molmil](/molmil-images/mine/6k5r) | Complex of SUMO2 with Phosphorylated viral SIM IE2 | Descriptor: | ASP-THR-ALA-GLY-CYS-ILE-VAL-ILE-SEP-ASP-SEP-GLU, Small ubiquitin-related modifier 3 | Authors: | Chatterjee, K.S, Das, R. | Deposit date: | 2019-05-30 | Release date: | 2019-08-07 | Last modified: | 2019-12-25 | Method: | SOLUTION NMR | Cite: | Casein kinase-2-mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2. J.Biol.Chem., 294, 2019
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6JXU
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![BU of 6jxu by Molmil](/molmil-images/mine/6jxu) | SUMO1 bound to SLS4-SIM peptide from ICP0 | Descriptor: | Small ubiquitin-related modifier, viral protein | Authors: | Hembram, D.S.S, Negi, H, Shet, D, Das, R. | Deposit date: | 2019-04-25 | Release date: | 2020-02-05 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2. J.Mol.Biol., 432, 2020
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6KNA
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![BU of 6kna by Molmil](/molmil-images/mine/6kna) | |
6JXV
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![BU of 6jxv by Molmil](/molmil-images/mine/6jxv) | SUMO1 bound to phosphorylated SLS4-SIM peptide from ICP0 | Descriptor: | Phosphorylated SLS4-SIM from ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier | Authors: | Hembram, D.S.S, Negi, H, Shet, D, Das, R. | Deposit date: | 2019-04-25 | Release date: | 2020-02-05 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2. J.Mol.Biol., 432, 2020
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6JXW
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![BU of 6jxw by Molmil](/molmil-images/mine/6jxw) | Complex of SUMO2 bound SLS4 from ICP0. | Descriptor: | SLS4-SIM from Ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier 2 | Authors: | Hembram, D.S.S, Negi, H, Shet, D, Das, R. | Deposit date: | 2019-04-25 | Release date: | 2020-02-05 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2. J.Mol.Biol., 432, 2020
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6JXX
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![BU of 6jxx by Molmil](/molmil-images/mine/6jxx) | SUMO2 bound to phosphorylated SLS4-SIM peptide from ICP0 | Descriptor: | Phosphorylated SLS4 from E3 ubiquitin ligase ICP0, Small ubiquitin-related modifier 2 | Authors: | Hembram, D.S.S, Negi, H, Shet, D, Das, R. | Deposit date: | 2019-04-25 | Release date: | 2020-02-05 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2. J.Mol.Biol., 432, 2020
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6MJ0
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![BU of 6mj0 by Molmil](/molmil-images/mine/6mj0) | Crystal structure of the complete turnip yellow mosaic virus 3'UTR | Descriptor: | RNA (101-MER) | Authors: | Hartwick, E.W, Costantino, D.A, MacFadden, A, Nix, J.C, Tian, S, Das, R, Kieft, J.S. | Deposit date: | 2018-09-20 | Release date: | 2019-01-09 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Ribosome-induced RNA conformational changes in a viral 3'-UTR sense and regulate translation levels. Nat Commun, 9, 2018
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7XSN
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![BU of 7xsn by Molmil](/molmil-images/mine/7xsn) | Native Tetrahymena ribozyme conformation | Descriptor: | RNA (387-MER) | Authors: | Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R. | Deposit date: | 2022-05-14 | Release date: | 2022-08-03 | Last modified: | 2024-07-03 | Method: | ELECTRON MICROSCOPY (3.01 Å) | Cite: | Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM. Proc.Natl.Acad.Sci.USA, 119, 2022
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7XSL
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![BU of 7xsl by Molmil](/molmil-images/mine/7xsl) | Misfolded Tetrahymena ribozyme conformation 2 | Descriptor: | RNA (388-MER) | Authors: | Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R. | Deposit date: | 2022-05-14 | Release date: | 2022-08-03 | Last modified: | 2024-07-03 | Method: | ELECTRON MICROSCOPY (3.84 Å) | Cite: | Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM. Proc.Natl.Acad.Sci.USA, 119, 2022
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7XSM
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![BU of 7xsm by Molmil](/molmil-images/mine/7xsm) | Misfolded Tetrahymena ribozyme conformation 3 | Descriptor: | RNA (388-MER) | Authors: | Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R. | Deposit date: | 2022-05-14 | Release date: | 2022-08-03 | Last modified: | 2024-07-03 | Method: | ELECTRON MICROSCOPY (4.01 Å) | Cite: | Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM. Proc.Natl.Acad.Sci.USA, 119, 2022
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7XSK
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![BU of 7xsk by Molmil](/molmil-images/mine/7xsk) | Misfolded Tetrahymena ribozyme conformation 1 | Descriptor: | RNA (388-MER) | Authors: | Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R. | Deposit date: | 2022-05-14 | Release date: | 2022-08-03 | Last modified: | 2024-07-03 | Method: | ELECTRON MICROSCOPY (3.53 Å) | Cite: | Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM. Proc.Natl.Acad.Sci.USA, 119, 2022
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5ZAU
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![BU of 5zau by Molmil](/molmil-images/mine/5zau) | |
5YCU
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![BU of 5ycu by Molmil](/molmil-images/mine/5ycu) | Domain swapped dimer of engineered hairpin loop1 mutant in Single-chain Monellin | Descriptor: | Single chain monellin | Authors: | Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R. | Deposit date: | 2017-09-08 | Release date: | 2018-11-28 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.32 Å) | Cite: | A five-residue motif for the design of domain swapping in proteins. Nat Commun, 10, 2019
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5YCW
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![BU of 5ycw by Molmil](/molmil-images/mine/5ycw) | Double domain swapped dimer of engineered hairpin loop1 and loop3 mutant in Single-chain Monellin | Descriptor: | single chain monellin | Authors: | Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R. | Deposit date: | 2017-09-08 | Release date: | 2018-11-28 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.285 Å) | Cite: | A five-residue motif for the design of domain swapping in proteins. Nat Commun, 10, 2019
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5YCT
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![BU of 5yct by Molmil](/molmil-images/mine/5yct) | Engineered hairpin loop3 mutant monomer in Single-chain Monellin | Descriptor: | Single chain Monellin | Authors: | Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R. | Deposit date: | 2017-09-08 | Release date: | 2018-11-28 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.851 Å) | Cite: | A five-residue motif for the design of domain swapping in proteins. Nat Commun, 10, 2019
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4L9U
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![BU of 4l9u by Molmil](/molmil-images/mine/4l9u) | Structure of C-terminal coiled coil of RasGRP1 | Descriptor: | GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION | Authors: | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | Deposit date: | 2013-06-18 | Release date: | 2013-08-21 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.6014 Å) | Cite: | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
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4L9M
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![BU of 4l9m by Molmil](/molmil-images/mine/4l9m) | Autoinhibited state of the Ras-specific exchange factor RasGRP1 | Descriptor: | CITRIC ACID, GLYCEROL, RAS guanyl-releasing protein 1, ... | Authors: | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | Deposit date: | 2013-06-18 | Release date: | 2013-08-21 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
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4LAD
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![BU of 4lad by Molmil](/molmil-images/mine/4lad) | Crystal Structure of the Ube2g2:RING-G2BR complex | Descriptor: | E3 ubiquitin-protein ligase AMFR, OXALATE ION, Ubiquitin-conjugating enzyme E2 G2, ... | Authors: | Liang, Y.-H, Li, J, Das, R, Byrd, R.A, Ji, X. | Deposit date: | 2013-06-19 | Release date: | 2013-08-28 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine. Embo J., 32, 2013
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