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PDB: 85 件

2LVO
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BU of 2lvo by Molmil
Structure of the gp78CUE domain bound to monubiquitin
分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin
著者Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R.
登録日2012-07-09
公開日2012-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2M7T
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BU of 2m7t by Molmil
Solution NMR Structure of Engineered Cystine Knot Protein 2.5D
分子名称: Cystine Knot Protein 2.5D
著者Cochran, F.V, Das, R.
登録日2013-04-30
公開日2014-05-07
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Challenging the state of the art in protein structure prediction: Highlights of experimental target structures for the 10th Critical Assessment of Techniques for Protein Structure Prediction Experiment CASP10.
Proteins, 82 Suppl 2, 2014
2MA2
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BU of 2ma2 by Molmil
Solution structure of RasGRP2 EF hands bound to calcium
分子名称: RAS guanyl-releasing protein 2
著者Kuriyan, J, Iwig, J, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J, Wemmer, D, Roose, J.
登録日2013-06-24
公開日2013-08-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
2LVP
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BU of 2lvp by Molmil
gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin
分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin
著者Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R.
登録日2012-07-09
公開日2012-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2LVQ
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BU of 2lvq by Molmil
gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin
分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin
著者Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R.
登録日2012-07-09
公開日2012-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2NBD
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BU of 2nbd by Molmil
Solution structure of V26A mutant of Ubiquitin at pH 6.0
分子名称: entity
著者Surana, P, Das, R.
登録日2016-02-04
公開日2016-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR
Protein Sci., 25, 2016
2NBE
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BU of 2nbe by Molmil
Solution structure of V26A mutant of Ubiquitin at pH 2.0
分子名称: entity
著者Surana, P, Das, R.
登録日2016-02-04
公開日2016-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR
Protein Sci., 25, 2016
7UPH
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BU of 7uph by Molmil
Structure of a ribosome with tethered subunits
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Kim, D.S, Watkins, A, Bidstrup, E, Lee, J, Topkar, V.V, Kofman, C, Schwarz, K.J, Liu, Y, Pintilie, G, Roney, E, Das, R, Jewett, M.C.
登録日2022-04-15
公開日2022-08-17
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (4.18 Å)
主引用文献Three-dimensional structure-guided evolution of a ribosome with tethered subunits.
Nat.Chem.Biol., 18, 2022
5WWP
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BU of 5wwp by Molmil
Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13)
分子名称: ORF1ab, SULFATE ION, ZINC ION
著者Hao, W, Wojdyla, J.A, Zhao, R, Han, R, Das, R, Zlatev, I, Manoharan, M, Wang, M, Cui, S.
登録日2017-01-03
公開日2017-07-05
最終更新日2021-09-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of Middle East respiratory syndrome coronavirus helicase
PLoS Pathog., 13, 2017
5CNN
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BU of 5cnn by Molmil
Crystal structure of the EGFR kinase domain mutant I682Q
分子名称: Epidermal growth factor receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Kovacs, E, Das, R, Mirza, A, Jura, N, Barros, T, Kuriyan, J.
登録日2015-07-17
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor.
Mol.Cell.Biol., 35, 2015
5CNO
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BU of 5cno by Molmil
Crystal structure of the EGFR kinase domain mutant V924R
分子名称: Epidermal growth factor receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Kovacs, E, Das, R, Mirza, A, Jura, N, Barros, T, Kuriyan, J.
登録日2015-07-17
公開日2015-07-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor.
Mol.Cell.Biol., 35, 2015
6IWJ
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BU of 6iwj by Molmil
A designed domain swapped dimer
分子名称: Archeal Protein MK0293
著者Nandwani, N, Negi, H, Das, R.
登録日2018-12-05
公開日2019-02-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
6J4I
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BU of 6j4i by Molmil
A conserved and buried edge-to-face aromatic interaction in SUMO is vital for the SUMO pathway
分子名称: Small ubiquitin-related modifier 1
著者Chatterjee, K.S, Das, R.
登録日2019-01-09
公開日2019-03-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A conserved and buried edge-to-face aromatic interaction in small ubiquitin-like modifier (SUMO) has a role in SUMO stability and function.
J.Biol.Chem., 294, 2019
6K5R
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BU of 6k5r by Molmil
Complex of SUMO2 with Phosphorylated viral SIM IE2
分子名称: ASP-THR-ALA-GLY-CYS-ILE-VAL-ILE-SEP-ASP-SEP-GLU, Small ubiquitin-related modifier 3
著者Chatterjee, K.S, Das, R.
登録日2019-05-30
公開日2019-08-07
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Casein kinase-2-mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2.
J.Biol.Chem., 294, 2019
5XFU
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BU of 5xfu by Molmil
Domain swapped dimer crystal structure of loop1 deletion mutant in Single-chain Monellin
分子名称: Monellin chain B,Monellin chain A
著者Surana, P, Nandwani, N, Udgaonkar, J, Gosavi, S, Das, R.
登録日2017-04-11
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Amino-acid composition after loop deletion drives domain swapping
Protein Sci., 26, 2017
5YCW
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BU of 5ycw by Molmil
Double domain swapped dimer of engineered hairpin loop1 and loop3 mutant in Single-chain Monellin
分子名称: single chain monellin
著者Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
登録日2017-09-08
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.285 Å)
主引用文献A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5YCU
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BU of 5ycu by Molmil
Domain swapped dimer of engineered hairpin loop1 mutant in Single-chain Monellin
分子名称: Single chain monellin
著者Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
登録日2017-09-08
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5YCT
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BU of 5yct by Molmil
Engineered hairpin loop3 mutant monomer in Single-chain Monellin
分子名称: Single chain Monellin
著者Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
登録日2017-09-08
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5XQM
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BU of 5xqm by Molmil
NMR solution structure of SMO1, Sumo homologue in Caenorhabditis elegans
分子名称: Small ubiquitin-related modifier
著者Gowda, C.M, Surana, P, Das, R.
登録日2017-06-07
公開日2017-11-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans
PLoS ONE, 12, 2017
4L9U
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BU of 4l9u by Molmil
Structure of C-terminal coiled coil of RasGRP1
分子名称: GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION
著者Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J.
登録日2013-06-18
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6014 Å)
主引用文献Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
4L9M
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BU of 4l9m by Molmil
Autoinhibited state of the Ras-specific exchange factor RasGRP1
分子名称: CITRIC ACID, GLYCEROL, RAS guanyl-releasing protein 1, ...
著者Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J.
登録日2013-06-18
公開日2013-08-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
4LAD
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BU of 4lad by Molmil
Crystal Structure of the Ube2g2:RING-G2BR complex
分子名称: E3 ubiquitin-protein ligase AMFR, OXALATE ION, Ubiquitin-conjugating enzyme E2 G2, ...
著者Liang, Y.-H, Li, J, Das, R, Byrd, R.A, Ji, X.
登録日2013-06-19
公開日2013-08-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013
2LFY
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BU of 2lfy by Molmil
Structure of the duplex when (5'S)-8,5'-cyclo-2'-deoxyguanosine is placed opposite dA
分子名称: DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*AP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*(2LF)P*TP*GP*TP*TP*TP*GP*T)-3')
著者Huang, H, Das, R.S, Basu, A, Stone, M.P.
登録日2011-07-18
公開日2012-06-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of (5'S)-8,5'-Cyclo-2'-deoxyguanosine Mismatched with dA or dT.
Chem.Res.Toxicol., 25, 2012
2LFX
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BU of 2lfx by Molmil
Structure of the duplex when (5'S)-8,5'-cyclo-2'-deoxyguanosine is placed opposite dT
分子名称: DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*TP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*(2LF)P*TP*GP*TP*TP*TP*GP*T)-3')
著者Huang, H, Das, R.S, Basu, A, Stone, M.P.
登録日2011-07-18
公開日2012-06-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of (5'S)-8,5'-Cyclo-2'-deoxyguanosine Mismatched with dA or dT.
Chem.Res.Toxicol., 25, 2012
2LG0
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BU of 2lg0 by Molmil
structure of the duplex containing (5'S)-8,5'-cyclo-2'-deoxyadenosine
分子名称: DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*TP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*(02I)P*TP*GP*TP*TP*TP*GP*T)-3')
著者Huang, H, Das, R.S, Basu, A, Stone, M.P.
登録日2011-07-18
公開日2012-06-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of (5'S)-8,5'-cyclo-2'-deoxyguanosine in DNA.
J.Am.Chem.Soc., 133, 2011

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