Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1599 件
4FDX
DownloadVisualize
BU of 4fdx by Molmil
Kinetic and structural characterization of the 4-oxalocrotonate tautomerase isozymes from Methylibium petroleiphilum
分子名称: 4-oxalocrotonase tautomerase isozyme
著者Terrell, C.R, Hoffman, D.W, Whitman, C.P.
登録日2012-05-29
公開日2013-06-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural and kinetic characterization of two 4-oxalocrotonate tautomerases in Methylibium petroleiphilum strain PM1.
Arch.Biochem.Biophys., 537, 2013
6B3P
DownloadVisualize
BU of 6b3p by Molmil
Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K in Complex with Maltoheptaose
分子名称: 1,2-ETHANEDIOL, Amy13K, FORMIC ACID, ...
著者Cockburn, D.W, Wawrzak, Z, Perez Medina, K, Koropatkin, N.M.
登録日2017-09-22
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Mol. Microbiol., 107, 2018
7U8Z
DownloadVisualize
BU of 7u8z by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (CD2) complexed with fluorinated peptoid inhibitor
分子名称: 1,2-ETHANEDIOL, 4-({N-[2-(benzylamino)-2-oxoethyl]-4-(dimethylamino)benzamido}methyl)-3-fluoro-N-hydroxybenzamide, ACETATE ION, ...
著者Watson, P.R, Cragin, A.D, Christianson, D.W.
登録日2022-03-09
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of Fluorinated Peptoid-Based Histone Deacetylase (HDAC) Inhibitors for Therapy-Resistant Acute Leukemia.
J.Med.Chem., 65, 2022
4FAZ
DownloadVisualize
BU of 4faz by Molmil
Kinetic and structural characterization of the 4-oxalocrotonate tautomerase isozymes from Methylibium petroleiphilum
分子名称: 4-oxalocrotonate isomerase protein, SULFATE ION
著者Terrell, C.R, Hoffman, D.W, Whitman, C.P.
登録日2012-05-22
公開日2013-06-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural and kinetic characterization of two 4-oxalocrotonate tautomerases in Methylibium petroleiphilum strain PM1.
Arch.Biochem.Biophys., 537, 2013
4RLA
DownloadVisualize
BU of 4rla by Molmil
ALTERING THE BINUCLEAR MANGANESE CLUSTER OF ARGINASE DIMINISHES THERMOSTABILITY AND CATALYTIC FUNCTION
分子名称: ARGINASE, MANGANESE (II) ION
著者Scolnick, L.R, Kanyo, Z.F, Christianson, D.W.
登録日1997-05-07
公開日1998-05-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Altering the binuclear manganese cluster of arginase diminishes thermostability and catalytic function.
Biochemistry, 36, 1997
3HPQ
DownloadVisualize
BU of 3hpq by Molmil
Crystal structure of wild-type adenylate kinase from E. coli, in complex with Ap5A
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Hilser, V.J, Travis, T.P, Bolen, D.W.
登録日2009-06-04
公開日2009-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins.
Proc.Natl.Acad.Sci.USA, 106, 2009
7U59
DownloadVisualize
BU of 7u59 by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Piperidine-4-hydroxamic acid Inhibitor
分子名称: 1,2-ETHANEDIOL, 1-[2-(benzylamino)ethyl]-N-hydroxypiperidine-4-carboxamide, PHOSPHATE ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2022-03-01
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献First Fluorescent Acetylspermidine Deacetylation Assay for HDAC10 Identifies Selective Inhibitors with Cellular Target Engagement.
Chembiochem, 23, 2022
6C6K
DownloadVisualize
BU of 6c6k by Molmil
Structural basis for preferential recognition of cap 0 RNA by a human IFIT1-IFIT3 protein complex
分子名称: Interferon-induced protein with tetratricopeptide repeats 1, Interferon-induced protein with tetratricopeptide repeats 3, MAGNESIUM ION, ...
著者Amarasinghe, G.K, Leung, D.W, Johnson, B, Xu, W.
登録日2018-01-18
公開日2018-04-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Human IFIT3 Modulates IFIT1 RNA Binding Specificity and Protein Stability.
Immunity, 48, 2018
4FBY
DownloadVisualize
BU of 4fby by Molmil
fs X-ray diffraction of Photosystem II
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Alonso-Mori, R, Hellmich, J, Tran, R, Hattne, J, Laksmono, H, Gloeckner, C, Echols, N, Sierra, R.G, Sellberg, J, Lassalle-Kaiser, B, Gildea, R.J, Glatzel, P, Grosse-Kunstleve, R.W, Latimer, M.J, Mcqueen, T.A, Difiore, D, Fry, A.R, Messerschmidt, M.M, Miahnahri, A, Schafer, D.W, Seibert, M.M, Sokaras, D, Weng, T.-C, Zwart, P.H, White, W.E, Adams, P.D, Bogan, M.J, Boutet, S, Williams, G.J, Messinger, J, Sauter, N.K, Zouni, A, Bergmann, U, Yano, J, Yachandra, V.K.
登録日2012-05-23
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (6.56 Å)
主引用文献Room temperature femtosecond X-ray diffraction of photosystem II microcrystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FCI
DownloadVisualize
BU of 4fci by Molmil
Crystal Structure of the Mn2+2-Human Arginase I-AGPA Complex
分子名称: 2-AMINO-3-GUANIDINO-PROPIONIC ACID, Arginase-1, MANGANESE (II) ION
著者D'Antonio, E.L, Christianson, D.W.
登録日2012-05-25
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Binding of the unreactive substrate analog L-2-amino-3-guanidinopropionic acid (dinor-L-arginine) to human arginase I.
Acta Crystallogr.,Sect.F, 68, 2012
4U0H
DownloadVisualize
BU of 4u0h by Molmil
Crystal Structure of M. tuberculosis ClpP1P1
分子名称: ATP-dependent Clp protease proteolytic subunit 1, SULFATE ION
著者Schmitz, K.R, Carney, D.W, Sello, J.K, Sauer, R.T.
登録日2014-07-11
公開日2014-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2479 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis ClpP1P2 suggests a model for peptidase activation by AAA+ partner binding and substrate delivery.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TZA
DownloadVisualize
BU of 4tza by Molmil
TGP, an extremely thermostable green fluorescent protein created by structure-guided surface engineering
分子名称: Fluorescent Protein
著者Close, D.W, Bradbury, A.R.M.
登録日2014-07-09
公開日2014-10-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Thermal green protein, an extremely stable, nonaggregating fluorescent protein created by structure-guided surface engineering.
Proteins, 83, 2015
4EP9
DownloadVisualize
BU of 4ep9 by Molmil
CRYSTAL STRUCTURE OF RAT CARNITINE PALMITOYLTRANSFERASE 2 IN COMPLEX WITH CoA-site inhibitor
分子名称: 4-[({1-[(5-chloro-2-methoxyphenyl)sulfonyl]-4-methyl-2,3-dihydro-1H-indol-6-yl}carbonyl)amino]benzoic acid, Carnitine O-palmitoyltransferase 2, mitochondrial, ...
著者Rufer, A.C, Thoma, R, Benz, J, Stihle, M, Gsell, B, De Roo, E, Banner, D.W, Mueller, F, Chomienne, O, Hennig, M.
登録日2012-04-17
公開日2013-04-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Isothermal titration calorimetry with micelles: Thermodynamics of inhibitor binding to carnitine palmitoyltransferase 2 membrane protein.
FEBS Open Bio, 3, 2013
4TZG
DownloadVisualize
BU of 4tzg by Molmil
Crystal structure of eCGP123, an extremely thermostable green fluorescent protein
分子名称: Fluorescent Protein
著者Close, D.W, Don Paul, C, Traore, D.A.K, Wilce, M.C.J, Prescott, M, Bradbury, A.R.M.
登録日2014-07-10
公開日2014-10-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Thermal green protein, an extremely stable, nonaggregating fluorescent protein created by structure-guided surface engineering.
Proteins, 83, 2015
3HPR
DownloadVisualize
BU of 3hpr by Molmil
Crystal structure of V148G adenylate kinase from E. coli, in complex with Ap5A
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Hilser, V.J, Travis, T.P, Bolen, D.W.
登録日2009-06-04
公開日2009-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins.
Proc.Natl.Acad.Sci.USA, 106, 2009
4FCK
DownloadVisualize
BU of 4fck by Molmil
Crystal Structure of the Co2+2-Human Arginase I-AGPA Complex
分子名称: 2-AMINO-3-GUANIDINO-PROPIONIC ACID, Arginase-1, COBALT (II) ION
著者D'Antonio, E.L, Christianson, D.W.
登録日2012-05-25
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Binding of the unreactive substrate analog L-2-amino-3-guanidinopropionic acid (dinor-L-arginine) to human arginase I.
Acta Crystallogr.,Sect.F, 68, 2012
4UIL
DownloadVisualize
BU of 4uil by Molmil
crystal structure of quinine-dependent Fab 314.1 with quinine
分子名称: FAB 314.1, Quinine
著者Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
登録日2015-03-30
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.853 Å)
主引用文献Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
3BNY
DownloadVisualize
BU of 3bny by Molmil
Crystal structure of aristolochene synthase complexed with 2-fluorofarnesyl diphosphate (2F-FPP)
分子名称: (2Z,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Aristolochene synthase, BETA-MERCAPTOETHANOL, ...
著者Shishova, E.Y, Christianson, D.W.
登録日2007-12-14
公開日2008-03-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献X-ray Crystallographic Studies of Substrate Binding to Aristolochene Synthase Suggest a Metal Ion Binding Sequence for Catalysis
J.Biol.Chem., 283, 2008
4UIM
DownloadVisualize
BU of 4uim by Molmil
crystal structure of quinine-dependent Fab 314.3
分子名称: FAB 314.3, SULFATE ION
著者Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
登録日2015-03-30
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
3COQ
DownloadVisualize
BU of 3coq by Molmil
Structural Basis for Dimerization in DNA Recognition by Gal4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*DAP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DAP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DTP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), ...
著者Hong, M, Fitzgerald, M.X, Harper, S, Luo, C, Speicher, D.W.
登録日2008-03-29
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dimerization in DNA recognition by gal4.
Structure, 16, 2008
4UIK
DownloadVisualize
BU of 4uik by Molmil
crystal structure of quinine-dependent Fab 314.1
分子名称: FAB 314.1
著者Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
登録日2015-03-30
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
4U0G
DownloadVisualize
BU of 4u0g by Molmil
Crystal Structure of M. tuberculosis ClpP1P2 bound to ADEP and agonist
分子名称: ADEP-2B5Me, ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2, ...
著者Schmitz, K.R, Carney, D.W, Sello, J.K, Sauer, R.T.
登録日2014-07-11
公開日2014-10-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.1978 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis ClpP1P2 suggests a model for peptidase activation by AAA+ partner binding and substrate delivery.
Proc.Natl.Acad.Sci.USA, 111, 2014
3COT
DownloadVisualize
BU of 3cot by Molmil
Crystal structure of human liver delta(4)-3-ketosteroid 5beta-reductase (akr1d1) in complex with progesterone and nadp. Resolution: 2.03 A.
分子名称: 3-oxo-5-beta-steroid 4-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROGESTERONE
著者Di Costanzo, L, Drury, J, Penning, T.M, Christianson, D.W.
登録日2008-03-29
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis.
J.Biol.Chem., 283, 2008
6CL1
DownloadVisualize
BU of 6cl1 by Molmil
Caspase-7 in complex with Ac-DW3-KE
分子名称: ACE-1MH-ASP-B3L-PHE-1U8, Caspase-7 subunit p11, Caspase-7 subunit p20
著者Solania, A.T, Gonzalez-Paez, G.E, Wolan, D.W.
登録日2018-03-01
公開日2019-03-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Selective and Rapid Cell-Permeable Inhibitor of Human Caspase-3.
Acs Chem.Biol., 14, 2019
4UIN
DownloadVisualize
BU of 4uin by Molmil
crystal structure of quinine-dependent Fab 314.3 with quinine
分子名称: FAB 314.3, Quinine
著者Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
登録日2015-03-30
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon