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PDB: 1951 results

5LQO
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RNA duplex has central consecutive GA pairs flanked by G-C basepairs
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*CP*GP*GP*C)-3')
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-17
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5LR4
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RNA duplex has central consecutive GA pairs flanked by G-U basepairs with a methyl group on the adenine N6
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*(6MZ)P*UP*GP*GP*C)-3'), SODIUM ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5O62
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The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine.
Descriptor: MAGNESIUM ION, N-ETHYLGUANIDINE, RNA (41-MER)
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-06-04
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5O69
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The structure of the thermobifida fusca guanidine III riboswitch with agmatine.
Descriptor: AGMATINE, MAGNESIUM ION, RNA (37-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-06-06
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.319 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
2YDS
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BU of 2yds by Molmil
CpOGA D298N in complex with TAB1-derived O-GlcNAc peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, O-GLCNACASE NAGJ, ...
Authors:Schimpl, M, Borodkin, V.S, Gray, L.J, van Aalten, D.M.F.
Deposit date:2011-03-24
Release date:2012-03-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Synergy of Peptide and Sugar in O-Glcnacase Substrate Recognition.
Chem.Biol., 19, 2012
5VJ7
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Ferredoxin NADP Oxidoreductase (Xfn)
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin-NADP(+) reductase subunit alpha, ...
Authors:Zadvornyy, O.A, Nguyen, D.M.N, Schut, G.J, Lipscomb, G.L, Tokmina-Lukaszewska, M, Adams, M.W.W, Peters, J.W.
Deposit date:2017-04-18
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Two functionally distinct NADP(+)-dependent ferredoxin oxidoreductases maintain the primary redox balance of Pyrococcus furiosus.
J. Biol. Chem., 292, 2017
5T6F
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1.90 A resolution structure of Norovirus 3CL protease in complex with the dipeptidyl inhibitor 7l (orthorhombic P form)
Descriptor: 3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[3-(4-methoxyphenoxy)propyl]sulfonyl}-L- alaninamide, Genome polyprotein
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Rathnayake, A.D, Damalanka, V.C, Weerawarna, P.M, Doyle, S.T, Alsoudi, A.F, Dissanayake, D.M.P, Chang, K.-O, Groutas, W.C.
Deposit date:2016-09-01
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based exploration and exploitation of the S4 subsite of norovirus 3CL protease in the design of potent and permeable inhibitors.
Eur J Med Chem, 126, 2016
5T6D
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2.10 A resolution structure of Norovirus 3CL protease in complex with the dipeptidyl inhibitor 7l (hexagonal form)
Descriptor: 3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[3-(4-methoxyphenoxy)propyl]sulfonyl}-L- alaninamide, Genome polyprotein
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Rathnayake, A.D, Damalanka, V.C, Weerawarna, P.M, Doyle, S.T, Alsoudi, A.F, Dissanayake, D.M.P, Chang, K.-O, Groutas, W.C.
Deposit date:2016-09-01
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based exploration and exploitation of the S4 subsite of norovirus 3CL protease in the design of potent and permeable inhibitors.
Eur J Med Chem, 126, 2016
5T6G
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2.45 A resolution structure of Norovirus 3CL protease in complex with the dipeptidyl inhibitor 7m (hexagonal form)
Descriptor: 3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-(octylsulfonyl)-L-alaninamide, Genome polyprotein
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Rathnayake, A.D, Damalanka, V.C, Weerawarna, P.M, Doyle, S.T, Alsoudi, A.F, Dissanayake, D.M.P, Chang, K.-O, Groutas, W.C.
Deposit date:2016-09-01
Release date:2016-11-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-based exploration and exploitation of the S4 subsite of norovirus 3CL protease in the design of potent and permeable inhibitors.
Eur J Med Chem, 126, 2016
1HJW
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Crystal structure of hcgp-39 in complex with chitin octamer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Houston, D.R, Recklies, A.D, Krupa, J.C, Van Aalten, D.M.F.
Deposit date:2003-02-28
Release date:2003-03-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Ligand-Induced Conformational Change of the 39-kDa Glycoprotein from Human Articular Chondrocytes
J.Biol.Chem., 278, 2003
1IKT
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LIGANDED STEROL CARRIER PROTEIN TYPE 2 (SCP-2) LIKE DOMAIN OF HUMAN MULTIFUNCTIONAL ENZYME TYPE 2 (MFE-2)
Descriptor: ESTRADIOL 17 BETA-DEHYDROGENASE 4, OXTOXYNOL-10, SULFATE ION
Authors:Haapalainen, A.M, van Aalten, D.M.F, Glumoff, T.
Deposit date:2001-05-07
Release date:2001-11-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the liganded SCP-2-like domain of human peroxisomal multifunctional enzyme type 2 at 1.75 A resolution.
J.Mol.Biol., 313, 2001
1JPD
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L-Ala-D/L-Glu Epimerase
Descriptor: L-Ala-D/L-Glu Epimerase
Authors:Gulick, A.M, Schmidt, D.M.Z, Gerlt, J.A, Rayment, I.
Deposit date:2001-08-01
Release date:2001-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: crystal structures of the L-Ala-D/L-Glu epimerases from Escherichia coli and Bacillus subtilis.
Biochemistry, 40, 2001
1JPM
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L-Ala-D/L-Glu Epimerase
Descriptor: GLYCEROL, L-Ala-D/L-Glu Epimerase, MAGNESIUM ION
Authors:Gulick, A.M, Schmidt, D.M.Z, Gerlt, J.A, Rayment, I.
Deposit date:2001-08-02
Release date:2001-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: crystal structures of the L-Ala-D/L-Glu epimerases from Escherichia coli and Bacillus subtilis.
Biochemistry, 40, 2001
1KOU
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BU of 1kou by Molmil
Crystal Structure of the Photoactive Yellow Protein Reconstituted with Caffeic Acid at 1.16 A Resolution
Descriptor: CAFFEIC ACID, N-BUTANE, PHOTOACTIVE YELLOW PROTEIN
Authors:van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L.
Deposit date:2001-12-22
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structure of the photoactive yellow protein reconstituted with caffeic acid at 1.16 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
1KWF
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Atomic Resolution Structure of an Inverting Glycosidase in Complex with Substrate
Descriptor: Endoglucanase A, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Guerin, D.M.A, Lascombe, M.-B, Costabel, M, Souchon, H, Lamzin, V, Beguin, P, Alzari, P.M.
Deposit date:2002-01-29
Release date:2002-03-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Atomic (0.94 A) resolution structure of an inverting glycosidase in complex with substrate.
J.Mol.Biol., 316, 2002
2EU1
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Crystal structure of the chaperonin GroEL-E461K
Descriptor: GROEL
Authors:Cabo-Bilbao, A, Spinelli, S, Sot, B, Agirre, J, Mechaly, A.E, Muga, A, Guerin, D.M.A.
Deposit date:2005-10-28
Release date:2006-08-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Crystal structure of the temperature-sensitive and allosteric-defective chaperonin GroEL(E461K).
J.Struct.Biol., 155, 2006
2H6E
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BU of 2h6e by Molmil
Crystal structure of the D-arabinose dehydrogenase from Sulfolobus solfataricus
Descriptor: D-arabinose 1-dehydrogenase, ZINC ION
Authors:Brouns, S.J.J, Turnbull, A.P, Akerboom, J, Willemen, H.L.D.M, De Vos, W.M, Van der Oost, J.
Deposit date:2006-05-31
Release date:2007-06-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Biochemical Properties of the d-Arabinose Dehydrogenase from Sulfolobus solfataricus
J.Mol.Biol., 371, 2007
3CHE
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Crystal structure of Aspergillus fumigatus chitinase B1 in complex with tripeptide
Descriptor: Chitinase, Peptide inhibitor, SULFATE ION
Authors:Andersen, O.A, van Aalten, D.M.F.
Deposit date:2008-03-09
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-based dissection of the natural product cyclopentapeptide chitinase inhibitor argifin.
Chem.Biol., 15, 2008
3CHF
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Crystal structure of Aspergillus fumigatus chitinase B1 in complex with tetrapeptide
Descriptor: Argifin, Chitinase, SULFATE ION
Authors:Andersen, O.A, van Aalten, D.M.F.
Deposit date:2008-03-09
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based dissection of the natural product cyclopentapeptide chitinase inhibitor argifin.
Chem.Biol., 15, 2008
3CHC
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Crystal structure of Aspergillus fumigatus chitinase B1 in complex with monopeptide
Descriptor: (2S)-2-acetamido-N-methyl-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]pentanamide, Chitinase, SULFATE ION
Authors:Andersen, O.A, van Aalten, D.M.F.
Deposit date:2008-03-09
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based dissection of the natural product cyclopentapeptide chitinase inhibitor argifin.
Chem.Biol., 15, 2008
3CH9
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Crystal structure of Aspergillus fumigatus chitinase B1 in complex with dimethylguanylurea
Descriptor: 1-methyl-3-(N-methylcarbamimidoyl)urea, Chitinase, SULFATE ION
Authors:Andersen, O.A, van Aalten, D.M.F.
Deposit date:2008-03-09
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based dissection of the natural product cyclopentapeptide chitinase inhibitor argifin.
Chem.Biol., 15, 2008
2J62
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Structure of a bacterial O-glcnacase in complex with glcnacstatin
Descriptor: CHLORIDE ION, N-[(5R,6R,7R,8S)-6,7-DIHYDROXY-5-(HYDROXYMETHYL)-2-(2-PHENYLETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDIN-8-YL]-2-METHYLPROPANAMIDE, O-GlcNAcase NagJ
Authors:Dorfmueller, H.C, Borodkin, V.S, Schimpl, M, Shepherd, S.M, Shpiro, N.A, van Aalten, D.M.F.
Deposit date:2006-09-22
Release date:2007-02-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:GlcNAcstatin: a picomolar, selective O-GlcNAcase inhibitor that modulates intracellular O-glcNAcylation levels.
J. Am. Chem. Soc., 128, 2006
2IUZ
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Crystal structure of Aspergillus fumigatus chitinase B1 in complex with C2-dicaffeine
Descriptor: 1,1'-ETHANE-1,2-DIYLBIS(3,7-DIMETHYL-3,7-DIHYDRO-1H-PURINE-2,6-DIONE), CHITINASE, SULFATE ION
Authors:Schuttelkopf, A.W, Andersen, O.A, Rao, F.V, Allwood, M, Lloyd, C.M, Eggleston, I.M, Van Aalten, D.M.F.
Deposit date:2006-06-08
Release date:2006-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Screening-Based Discovery and Structural Dissection of a Novel Family 18 Chitinase Inhibitor
J.Biol.Chem., 281, 2006
2IW0
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Structure of the chitin deacetylase from the fungal pathogen Colletotrichum lindemuthianum
Descriptor: ACETATE ION, CHITIN DEACETYLASE, CHLORIDE ION, ...
Authors:Blair, D.E, Hekmat, O, Schuttelkopf, A.W, Shrestha, B, Tokuyasu, K, Withers, S.G, van Aalten, D.M.F.
Deposit date:2006-06-23
Release date:2006-07-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure and Mechanism of Chitin Deacetylase from the Fungal Pathogen Colletotrichum Lindemuthianum.
Biochemistry, 45, 2006
3CHD
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Crystal structure of Aspergillus fumigatus chitinase B1 in complex with dipeptide
Descriptor: (2S)-2-[[(2S)-2-acetamido-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]pentanoyl]-methyl-amino]-3-phenyl-propanoic acid, Chitinase, SULFATE ION
Authors:Andersen, O.A, van Aalten, D.M.F.
Deposit date:2008-03-09
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based dissection of the natural product cyclopentapeptide chitinase inhibitor argifin.
Chem.Biol., 15, 2008

226707

數據於2024-10-30公開中

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