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PDB: 2004 results

2W1D
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Structure determination of Aurora Kinase in complex with inhibitor
Descriptor: 2-(1H-pyrazol-3-yl)-1H-benzimidazole, SERINE/THREONINE-PROTEIN KINASE 6
Authors:Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
Deposit date:2008-10-17
Release date:2009-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
5QHL
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BU of 5qhl by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000551a
Descriptor: 1,2-ETHANEDIOL, IODIDE ION, Protein FAM83B, ...
Authors:Pinkas, D.M, Bufton, J.C, Fox, A.E, Talon, R, Krojer, T, Douangamath, A, Collins, P, Zhang, R, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Bullock, A.N.
Deposit date:2018-05-18
Release date:2018-12-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
1D03
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REFINED STRUCTURES OF OXIDIZED FLAVODOXIN FROM ANACYSTIS NIDULANS
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Drennan, C.L, Pattridge, K.A, Weber, C.H, Metzger, A.L, Hoover, D.M, Ludwig, M.L.
Deposit date:1999-09-08
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Refined structures of oxidized flavodoxin from Anacystis nidulans.
J.Mol.Biol., 294, 1999
1CZH
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BU of 1czh by Molmil
COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, GLYCEROL, ...
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-03
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999
1CZR
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COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-07
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999
1D04
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BU of 1d04 by Molmil
COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-08
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999
8TXL
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Nan Regulatory Protein full length mutant R148A
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Wood, D.M, Horne, C.R, Dobson, R.C.J.
Deposit date:2023-08-23
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of isomerase domain of the nan-regulatory protein (NanR) from Streptococcus pneumoniae
To Be Published
2VTL
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Identification of N-(4-piperidinyl)-4-(2,6-dichlorobenzoylamino)-1H- pyrazole-3-carboxamide (AT7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design
Descriptor: CELL DIVISION PROTEIN KINASE 2, N-phenyl-1H-pyrazole-3-carboxamide
Authors:Wyatt, P.G, Woodhead, A.J, Boulstridge, J.A, Berdini, V, Carr, M.G, Cross, D.M, Danillon, D, Davis, D.J, Devine, L.A, Early, T.R, Feltell, R.E, Lewis, E.J, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Reule, M, Saxty, G, Seavers, L.C.A, Smith, D, Squires, M.S, Trewartha, G, Walker, M.T, Woolford, A.J.
Deposit date:2008-05-15
Release date:2008-08-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of N-(4-Piperidinyl)-4-(2,6-Dichlorobenzoylamino)-1H-Pyrazole-3-Carboxamide (at7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
J.Med.Chem., 51, 2008
2VTS
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BU of 2vts by Molmil
Identification of N-(4-piperidinyl)-4-(2,6-dichlorobenzoylamino)-1H- pyrazole-3-carboxamide (AT7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
Descriptor: 5-[(4-AMINOCYCLOHEXYL)AMINO]-7-(PROPAN-2-YLAMINO)PYRAZOLO[1,5-A]PYRIMIDINE-3-CARBONITRILE, CELL DIVISION PROTEIN KINASE 2
Authors:Wyatt, P.G, Woodhead, A.J, Boulstridge, J.A, Berdini, V, Carr, M.G, Cross, D.M, Danillon, D, Davis, D.J, Devine, L.A, Early, T.R, Feltell, R.E, Lewis, E.J, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Reule, M, Saxty, G, Seavers, L.C.A, Smith, D, Squires, M.S, Trewartha, G, Walker, M.T, Woolford, A.J.
Deposit date:2008-05-15
Release date:2008-08-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification of N-(4-Piperidinyl)-4-(2,6-Dichlorobenzoylamino)-1H-Pyrazole-3-Carboxamide (at7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
J.Med.Chem., 51, 2008
2W1F
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BU of 2w1f by Molmil
Structure determination of Aurora Kinase in complex with inhibitor
Descriptor: N-[3-(1H-BENZIMIDAZOL-2-YL)-1H-PYRAZOL-4-YL]BENZAMIDE, SERINE/THREONINE-PROTEIN KINASE 6
Authors:Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
Deposit date:2008-10-17
Release date:2009-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
5QHR
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BU of 5qhr by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000635a
Descriptor: 1,2-ETHANEDIOL, N-(3-fluorophenyl)-5-methyl-1,3,4-thiadiazol-2-amine, Protein FAM83B
Authors:Pinkas, D.M, Bufton, J.C, Fox, A.E, Talon, R, Krojer, T, Douangamath, A, Collins, P, Zhang, R, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Bullock, A.N.
Deposit date:2018-05-18
Release date:2018-12-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
8TX9
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BU of 8tx9 by Molmil
Nan Regulatory Protein (core isomerase domain) from Streptococcus pneumoniae
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, MurR/RpiR family transcriptional regulator, SODIUM ION
Authors:Wood, D.M, Horne, C.R, Panjikar, S, Dobson, R.C.J.
Deposit date:2023-08-23
Release date:2024-09-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of isomerase domain of the nan-regulatory protein (NanR) from Streptococcus pneumoniae
To Be Published
1TS5
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BU of 1ts5 by Molmil
I140T MUTANT OF TOXIC SHOCK SYNDROME TOXIN-1 FROM S. AUREUS
Descriptor: TOXIC SHOCK SYNDROME TOXIN-1
Authors:Earhart, C.A, Mitchell, D.T, Murray, D.L, Pinheiro, D.M, Matsumura, M, Schlievert, P.M, Ohlendorf, D.H.
Deposit date:1997-10-10
Release date:1998-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of five mutants of toxic shock syndrome toxin-1 with reduced biological activity.
Biochemistry, 37, 1998
1TZ3
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BU of 1tz3 by Molmil
crystal structure of aminoimidazole riboside kinase complexed with aminoimidazole riboside
Descriptor: 5-AMINOIMIDAZOLE RIBONUCLEOSIDE, POTASSIUM ION, putative sugar kinase
Authors:Zhang, Y, Dougherty, M, Downs, D.M, Ealick, S.E.
Deposit date:2004-07-09
Release date:2004-10-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of an Aminoimidazole Riboside Kinase from Salmonella enterica; Implications for the Evolution of the Ribokinase Superfamily
STRUCTURE, 12, 2004
1CZO
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BU of 1czo by Molmil
COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, SULFATE ION
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-03
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999
4HMN
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BU of 4hmn by Molmil
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with (4-(4-Chlorophenyl)piperazin-1-yl)(morpholino)methanone (24)
Descriptor: 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Turnbull, A.P, Flanagan, J.U, Atwell, G.J, Heinrich, D.M, Jamieson, S.M.F, Brooke, D.G, Silva, S, Rigoreau, L.J.M, Trivier, E, Soudy, C, Samlal, S.S, Owen, P.J, Schroeder, E, Raynham, T, Denny, W.A.
Deposit date:2012-10-18
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Morpholylureas are a new class of potent and selective inhibitors of the type 5 17-beta-hydroxysteroid dehydrogenase (AKR1C3).
Bioorg.Med.Chem., 22, 2014
1TOT
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BU of 1tot by Molmil
ZZ Domain of CBP- a Novel Fold for a Protein Interaction Module
Descriptor: CREB-binding protein, ZINC ION
Authors:Legge, G.B, Martinez-Yamout, M.A, Hambly, D.M, Trinh, T, Dyson, H.J, Wright, P.E.
Deposit date:2004-06-15
Release date:2005-01-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module
J.Mol.Biol., 343, 2004
1DA2
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BU of 1da2 by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO4CG): N4-METHOXYCYTOSINE/GUANINE BASE-PAIRS IN Z-DNA
Descriptor: DNA (5'-D(*CP*GP*CP*GP*(C45)P*G)-3')
Authors:Van Meervelt, L, Moore, M.H, Lin, P.K.T, Brown, D.M, Kennard, O.
Deposit date:1992-10-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular and crystal structure of d(CGCGmo4CG): N4-methoxycytosine.guanine base-pairs in Z-DNA.
J.Mol.Biol., 216, 1990
1U5Y
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BU of 1u5y by Molmil
Crystal structure of murine APRIL, pH 8.0
Descriptor: Tumor necrosis factor ligand superfamily member 13
Authors:Wallweber, H.J, Compaan, D.M, Starovasnik, M.A, Hymowitz, S.G.
Deposit date:2004-07-28
Release date:2004-10-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of A Proliferation-inducing Ligand, APRIL.
J.Mol.Biol., 343, 2004
6M80
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BU of 6m80 by Molmil
Collagen peptide containing aza-proline and aza-glycine
Descriptor: 1,2-ETHANEDIOL, Collagen peptide containing aza-proline and aza-glycine, SULFATE ION
Authors:Chenoweth, D.M, Kasznel, A.J, Porter, N.J.
Deposit date:2018-08-21
Release date:2019-07-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen.
Chem Sci, 10, 2019
8X4N
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Crystal structure of the PI3P-binding domain of Legionella SetA in complex with inositol 1,3-bisphosphate
Descriptor: GLYCEROL, PHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER, Subversion of eukaryotic traffic protein A
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of the PI3P-binding domain of Legionella SetA in complex with inositol 1,3-bisphosphate
To Be Published
8X4K
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Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPDGlc
Descriptor: MAGNESIUM ION, SULFATE ION, Subversion of eukaryotic traffic protein A, ...
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPDGlc
To Be Published
8X4J
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BU of 8x4j by Molmil
Crystal structure of the glycosyltransferase domain of Legionella SetA (unbound)
Descriptor: MAGNESIUM ION, Subversion of eukaryotic traffic protein A
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of Legionella effector SetA glycosyltransferase domain in the unbound form
To Be Published
8X4M
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Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPD
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPD
To Be Published
1E84
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BU of 1e84 by Molmil
Cytochrome c' from Alcaligenes xylosoxidans - reduced structure
Descriptor: CYTOCHROME C', HEME C
Authors:Lawson, D.M, Stevenson, C.E.M, Andrew, C.R, Eady, R.R.
Deposit date:2000-09-15
Release date:2000-11-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unprecedented Proximal Binding of Nitric Oxide to Heme: Implications for Guanylate Cyclase
Embo J., 19, 2000

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