Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2999 results

1JSN
DownloadVisualize
BU of 1jsn by Molmil
STRUCTURE OF AVIAN H5 HAEMAGGLUTININ COMPLEXED WITH LSTA RECEPTRO ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs.
Proc.Natl.Acad.Sci.USA, 98, 2001
2IJD
DownloadVisualize
BU of 2ijd by Molmil
Crystal Structure of the Poliovirus Precursor Protein 3CD
Descriptor: Picornain 3C, RNA-directed RNA polymerase, SULFATE ION, ...
Authors:Marcotte, L.L, Gohara, D.W, Filman, D.J, Hogle, J.M.
Deposit date:2006-09-29
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase.
J.Virol., 81, 2007
2J53
DownloadVisualize
BU of 2j53 by Molmil
Solution Structure of GB1 domain Protein G and low and high pressure.
Descriptor: IMMUNOGLOBULIN G-BINDING PROTEIN G
Authors:Wilton, D.J, Tunnicliffe, R.B, Kamatari, Y.O, Akasaka, K, Williamson, M.P.
Deposit date:2006-09-11
Release date:2007-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pressure-Induced Changes in the Solution Structure of the Gb1 Domain of Protein G.
Proteins, 71, 2008
1JSH
DownloadVisualize
BU of 1jsh by Molmil
CRYSTAL STRUCTURE OF H9 HAEMAGGLUTININ COMPLEXED WITH LSTA RECEPTOR ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JSM
DownloadVisualize
BU of 1jsm by Molmil
STRUCTURE OF H5 AVIAN HAEMAGGLUTININ
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:H5 avian and H9 swine influenza virus haemagglutinin structures: possible origin of influenza subtypes.
EMBO J., 21, 2002
1JVC
DownloadVisualize
BU of 1jvc by Molmil
Dimeric DNA Quadruplex Containing Major Groove-Aligned A.T.A.T and G.C.G.C Tetrads Stabilized by Inter-Subunit Watson-Crick A:T and G:C Pairs
Descriptor: 5'-D(*GP*AP*GP*CP*AP*GP*GP*T)-3'
Authors:Zhang, N, Gorin, A, Majumdar, A, Kettani, A, Chernichenko, N, Skripkin, E, Patel, D.J.
Deposit date:2001-08-29
Release date:2001-10-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Dimeric DNA quadruplex containing major groove-aligned A-T-A-T and G-C-G-C tetrads stabilized by inter-subunit Watson-Crick A-T and G-C pairs.
J.Mol.Biol., 312, 2001
1JJP
DownloadVisualize
BU of 1jjp by Molmil
A(GGGG) Pentad-Containing Dimeric DNA Quadruplex Involving Stacked G(anti)G(anti)G(anti)G(syn) Tetrads
Descriptor: 5'-D(*GP*GP*GP*AP*GP*GP*TP*TP*TP*GP*GP*GP*AP*T)-3'
Authors:Zhang, N, Gorin, A, Majumdar, A, Kettani, A, Chernichenko, N, Skripkin, E, Patel, D.J.
Deposit date:2001-07-09
Release date:2001-09-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:V-shaped scaffold: a new architectural motif identified in an A x (G x G x G x G) pentad-containing dimeric DNA quadruplex involving stacked G(anti) x G(anti) x G(anti) x G(syn) tetrads.
J.Mol.Biol., 311, 2001
1HP2
DownloadVisualize
BU of 1hp2 by Molmil
SOLUTION STRUCTURE OF A TOXIN FROM THE SCORPION TITYUS SERRULATUS (TSTX-K ALPHA) DETERMINED BY NMR.
Descriptor: TITYUSTOXIN K ALPHA
Authors:Ellis, K.C, Tenenholz, T.C, Gilly, W.F, Blaustein, M.P, Weber, D.J.
Deposit date:2000-12-12
Release date:2001-06-13
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Interaction of a toxin from the scorpion Tityus serrulatus with a cloned K+ channel from squid (sqKv1A).
Biochemistry, 40, 2001
1K8L
DownloadVisualize
BU of 1k8l by Molmil
XBY6: An analog of CK14 containing 6 dithiophosphate groups
Descriptor: FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX
Authors:Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G.
Deposit date:2001-10-24
Release date:2003-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB
Bioorg.Chem., 30, 2002
1K8J
DownloadVisualize
BU of 1k8j by Molmil
NMR STRUCTURE OF THE CK14 DNA DUPLEX: A PORTION OF THE KNOWN NF-kB SEQUENCE CK1
Descriptor: FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX
Authors:Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G.
Deposit date:2001-10-24
Release date:2003-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB
Bioorg.Chem., 30, 2002
1K8N
DownloadVisualize
BU of 1k8n by Molmil
NMR structure of the XBY2 DNA duplex, an analog of CK14 containing phosphorodithioate groups at C22 and C24
Descriptor: FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX
Authors:Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G.
Deposit date:2001-10-24
Release date:2003-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB
Bioorg.Chem., 30, 2002
2H0S
DownloadVisualize
BU of 2h0s by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
Descriptor: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme deoxy RNA inhibitor
Authors:Klein, D.J, Ferre-D'Amare, A.R.
Deposit date:2006-05-15
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H0X
DownloadVisualize
BU of 2h0x by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
Descriptor: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme amino RNA inhibitor
Authors:Klein, D.J, Ferre-D'Amare, A.R.
Deposit date:2006-05-15
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H4U
DownloadVisualize
BU of 2h4u by Molmil
Crystal Structure of Human Thioesterase Superfamily Member 2
Descriptor: Thioesterase superfamily member 2
Authors:Ogg, D.J, Uppenberg, J, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Grasslund, S, Flodin, S, Hammerstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Sundstrom, M, Thorsell, A.-G, Weigelt, J, Hallberg, M, Structural Genomics Consortium (SGC)
Deposit date:2006-05-25
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of human thioesterase superfamily member 2
To be Published
2GMO
DownloadVisualize
BU of 2gmo by Molmil
NMR-structure of an independently folded C-terminal domain of influenza polymerase subunit PB2
Descriptor: Polymerase basic protein 2
Authors:Boudet, J, Tarendeau, F, Guilligay, D, Mas, P, Bougault, C.M, Cusack, S, Simorre, J.-P, Hart, D.J.
Deposit date:2006-04-07
Release date:2007-02-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and nuclear import function of the C-terminal domain of influenza virus polymerase PB2 subunit.
Nat.Struct.Mol.Biol., 14, 2007
1JWY
DownloadVisualize
BU of 1jwy by Molmil
CRYSTAL STRUCTURE OF THE DYNAMIN A GTPASE DOMAIN COMPLEXED WITH GDP, DETERMINED AS MYOSIN FUSION
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Niemann, H.H, Knetsch, M.L.W, Scherer, A, Manstein, D.J, Kull, F.J.
Deposit date:2001-09-05
Release date:2001-11-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a dynamin GTPase domain in both nucleotide-free and GDP-bound forms.
EMBO J., 20, 2001
2GJX
DownloadVisualize
BU of 2gjx by Molmil
Crystallographic structure of human beta-Hexosaminidase A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase alpha chain, ...
Authors:Lemieux, M.J, Mark, B.L, Cherney, M.M, Withers, S.G, Mahuran, D.J, James, M.N.G.
Deposit date:2006-03-31
Release date:2006-06-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic structure of human beta-Hexosaminidase A: Interpretation of Tay-Sachs Mutations and Loss of GM2 Ganglioside Hydrolysis
J.Mol.Biol., 359, 2006
1JO1
DownloadVisualize
BU of 1jo1 by Molmil
N7-Guanine Adduct of 2,7-diaminomitosene with DNA
Descriptor: 5'-D(*GP*TP*GP*(DAJ)GP*TP*AP*TP*AP*CP*CP*AP*C)-3', DECARBAMOYL-2,7-DIAMINOMITOSENE
Authors:Subramaniam, G, Paz, M.M, Kumar, G.S, Das, A, Palom, Y, Clement, C.C, Patel, D.J, Tomasz, M.
Deposit date:2001-07-26
Release date:2001-09-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a guanine-N7-linked complex of the mitomycin C metabolite 2,7-diaminomitosene and DNA. Basis of sequence selectivity.
Biochemistry, 40, 2001
2EUM
DownloadVisualize
BU of 2eum by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with 8:0 Lactosylceramide
Descriptor: DECANE, Glycolipid transfer protein, N-OCTANE, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2F2I
DownloadVisualize
BU of 2f2i by Molmil
Solution structure of [P20D,V21K]-kalata B1
Descriptor: Kalata-B1
Authors:Clark, R.J, Daly, N.L, Craik, D.J.
Deposit date:2005-11-17
Release date:2006-01-31
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Structural plasticity of the cyclic cystine knot framework: implications for biological activity and drug design
Biochem.J., 394, 2006
2F6N
DownloadVisualize
BU of 2f6n by Molmil
Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the free form
Descriptor: ZINC ION, bromodomain PHD finger transcription factor
Authors:Li, H, Patel, D.J.
Deposit date:2005-11-29
Release date:2006-07-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F33
DownloadVisualize
BU of 2f33 by Molmil
NMR solution structure of Ca2+-loaded calbindin D28K
Descriptor: Calbindin
Authors:Kojetin, D.J, Venters, R.A, Kordys, D.R, Thompson, R.J, Kumar, R, Cavanagh, J.
Deposit date:2005-11-18
Release date:2006-07-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure, binding interface and hydrophobic transitions of Ca(2+)-loaded calbindin-D(28K).
Nat.Struct.Mol.Biol., 13, 2006
1JYT
DownloadVisualize
BU of 1jyt by Molmil
Solution structure of olfactory marker protein from rat
Descriptor: Olfactory Marker Protein
Authors:Baldisseri, D.M, Margolis, J.W, Weber, D.J, Koo, J.H, Margolis, F.M.
Deposit date:2001-09-13
Release date:2001-10-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Olfactory marker protein (OMP) exhibits a beta-clam fold in solution: implications for target peptide interaction and olfactory signal transduction.
J.Mol.Biol., 319, 2002
1K2H
DownloadVisualize
BU of 1k2h by Molmil
Three-dimensional Solution Structure of apo-S100A1.
Descriptor: S-100 protein, alpha chain
Authors:Rustandi, R.R, Baldisseri, D.M, Inman, K.G, Nizner, P, Hamilton, S.M, Landar, A, Landar, A, Zimmer, D.B, Weber, D.J.
Deposit date:2001-09-27
Release date:2002-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the calcium-signaling protein apo-S100A1 as determined by NMR.
Biochemistry, 41, 2002
2J5P
DownloadVisualize
BU of 2j5p by Molmil
E. coli FtsK gamma domain
Descriptor: DNA TRANSLOCASE FTSK
Authors:Sivanathan, V, Allen, M.D, de Bekker, C, Baker, R, Arciszewska, L, Freund, S.M, Bycroft, M, Lowe, J, Sherratt, D.J.
Deposit date:2006-09-19
Release date:2006-10-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Ftsk Gamma Domain Directs Oriented DNA Translocation by Interacting with Kops.
Nat.Struct.Mol.Biol., 13, 2006

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon