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PDB: 3021 results

3B4A
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BU of 3b4a by Molmil
T. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphate
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
Authors:Klein, D.J, Ferre-D'Amare, A.R.
Deposit date:2007-10-23
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Essential Role of an Active-Site Guanine in glmS Ribozyme Catalysis.
J.Am.Chem.Soc., 129, 2007
7BMK
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BU of 7bmk by Molmil
ATP-Competitive Partial Antagonists-'PAIR's-Rheostatically Modulate IRE1alpha's Kinase Helix-alphaC to Segregate its RNase-Mediated Biological Outputs
Descriptor: 1,2-ETHANEDIOL, 2,2,2-tris(fluoranyl)-~{N}-[4-[3-[2-[[(3~{S})-piperidin-3-yl]amino]pyrimidin-4-yl]pyridin-2-yl]oxynaphthalen-1-yl]ethanesulfonamide, DI(HYDROXYETHYL)ETHER, ...
Authors:Feldman, H.C, Ghosh, R, Auyeung, V, Mueller, J.L, Vidadala, V.N, Olivier, A, Backes, B.J, Zikherman, J, Papa, F.R, Maly, D.J.
Deposit date:2021-01-20
Release date:2021-09-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:ATP-competitive partial antagonists of the IRE1 alpha RNase segregate outputs of the UPR.
Nat.Chem.Biol., 17, 2021
3B4B
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BU of 3b4b by Molmil
T. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkage
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, 3'-DEOXYADENOSINE, MAGNESIUM ION, ...
Authors:Klein, D.J, Ferre-D'Amare, A.R.
Deposit date:2007-10-23
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Essential Role of an Active-Site Guanine in glmS Ribozyme Catalysis.
J.Am.Chem.Soc., 129, 2007
7AWK
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BU of 7awk by Molmil
Crystal structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955)
Descriptor: Probable endoribonuclease HigB1
Authors:Bigot, D.J, Guillet, V, Mourey, L.
Deposit date:2020-11-08
Release date:2021-11-24
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Substrate recognition and cryo-EM structure of the ribosome-bound TAC toxin of Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7BC4
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BU of 7bc4 by Molmil
Cryo-EM structure of fatty acid synthase (FAS) from Pichia pastoris
Descriptor: FLAVIN MONONUCLEOTIDE, Fatty acid synthase subunit alpha, Fatty acid synthase subunit beta
Authors:Snowden, J.S, Alzahrani, J, Sherry, L, Stacey, M, Rowlands, D.J, Ranson, N.A, Stonehouse, N.J.
Deposit date:2020-12-18
Release date:2021-05-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into Pichia pastoris fatty acid synthase.
Sci Rep, 11, 2021
7BC5
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BU of 7bc5 by Molmil
Cryo-EM structure of ACP domain from Pichia pastoris fatty acid synthase (FAS)
Descriptor: Fatty acid synthase subunit alpha
Authors:Snowden, J.S, Alzahrani, J, Sherry, L, Stacey, M, Rowlands, D.J, Ranson, N.A, Stonehouse, N.J.
Deposit date:2020-12-18
Release date:2021-05-19
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into Pichia pastoris fatty acid synthase.
Sci Rep, 11, 2021
3B4C
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BU of 3b4c by Molmil
T. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkage
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, 3'-DEOXYADENOSINE, MAGNESIUM ION, ...
Authors:Klein, D.J, Ferre-D'Amare, A.R.
Deposit date:2007-10-23
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Essential Role of an Active-Site Guanine in glmS Ribozyme Catalysis.
J.Am.Chem.Soc., 129, 2007
3BS1
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BU of 3bs1 by Molmil
Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with a Novel Mode of Binding
Descriptor: Accessory gene regulator protein A, DNA (5'-D(*DAP*DAP*(BRU)P*DAP*DCP*DTP*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DTP*DAP*DA)-3'), DNA (5'-D(*DTP*DTP*DTP*DAP*DAP*DCP*DAP*DGP*DTP*DTP*DAP*DAP*DGP*(BRU)P*DAP*DT)-3'), ...
Authors:Sidote, D.J, Barbieri, C, Wu, T, Stock, A.M.
Deposit date:2007-12-21
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with an Unusual Mode of Binding.
Structure, 16, 2008
3BXL
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BU of 3bxl by Molmil
Crystal structure of the R-type calcium channeL (CaV2.3) IQ domain and CA2+calmodulin complex
Descriptor: CALCIUM ION, Calmodulin, SULFATE ION, ...
Authors:Mori, M.X, Vander Kooi, C.W, Leahy, D.J, Yue, D.T.
Deposit date:2008-01-14
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the CaV2 IQ domain in complex with Ca2+/calmodulin
To be Published
3BXK
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BU of 3bxk by Molmil
Crystal structure of the P/Q-type calcium channel (CaV2.1) IQ domain and CA2+calmodulin complex
Descriptor: CALCIUM ION, Calmodulin, SULFATE ION, ...
Authors:Mori, M.X, Vander Kooi, C.W, Leahy, D.J, Yue, D.T.
Deposit date:2008-01-14
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the P/Q-type calcium channel (CaV2.1) IQ domain and CA2+calmodulin complex
To be Published
2Z8X
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BU of 2z8x by Molmil
Crystal structure of extracellular lipase from Pseudomonas sp. MIS38
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2007-09-11
Release date:2007-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation
FEBS Lett., 581, 2007
4JS0
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BU of 4js0 by Molmil
Complex of Cdc42 with the CRIB-PR domain of IRSp53
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Brain-specific angiogenesis inhibitor 1-associated protein 2, Cell division control protein 42 homolog, ...
Authors:Kast, D.J, Dominguez, R.
Deposit date:2013-03-22
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of IRSp53 inhibition and combinatorial activation by Cdc42 and downstream effectors.
Nat.Struct.Mol.Biol., 21, 2014
4JO9
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BU of 4jo9 by Molmil
Crystal structure of the human Nup49CCS2+3* Nup57CCS3* complex 1:2 stoichiometry
Descriptor: Nucleoporin p54, Nucleoporin p58/p45
Authors:Stuwe, T, Bley, C.J, Mayo, D.J, Hoelz, A.
Deposit date:2013-03-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Architecture of the fungal nuclear pore inner ring complex.
Science, 350, 2015
4JO7
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BU of 4jo7 by Molmil
Crystal structure of the human Nup49CCS2+3* Nup57CCS3* complex with 2:2 stoichiometry
Descriptor: Nucleoporin p54, Nucleoporin p58/p45
Authors:Stuwe, T, Bley, C.J, Mayo, D.J, Hoelz, A.
Deposit date:2013-03-17
Release date:2014-09-17
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Architecture of the fungal nuclear pore inner ring complex.
Science, 350, 2015
4JS9
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BU of 4js9 by Molmil
Structural Characterization of Inducible Nitric Oxide Synthase Substituted With Mesoheme
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, Mesoheme, Nitric oxide synthase, ...
Authors:Hannibal, L, Page, R.C, Bolisetty, K, Yu, Z, Misra, S, Stuehr, D.J.
Deposit date:2013-03-22
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.784 Å)
Cite:Kinetic and Structural Characterization of Inducible Nitric Oxide Synthase Substituted With Mesoheme
To be Published
4K80
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BU of 4k80 by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 2:0 ceramide-1-phosphate (2:0-C1P)
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-17
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4K9B
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BU of 4k9b by Molmil
Structure of Ternary Complex of cGAS with dsDNA and Bound c[G(2 ,5 )pA(3 ,5 )p]
Descriptor: ADENOSINE MONOPHOSPHATE, Cyclic GMP-AMP synthase, DNA-F, ...
Authors:Gao, P, Wu, Y, Patel, D.J.
Deposit date:2013-04-19
Release date:2013-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4KBS
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BU of 4kbs by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 12:0 phosphatidic acid (12:0 PA)
Descriptor: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-ETHANEDIOL, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-23
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4K96
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BU of 4k96 by Molmil
Structure of Binary Complex of cGAS with Bound dsDNA
Descriptor: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ...
Authors:Gao, P, Wu, Y, Patel, D.J.
Deposit date:2013-04-19
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.084 Å)
Cite:Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4KNT
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BU of 4knt by Molmil
Copper nitrite reductase from Nitrosomonas europaea pH 8.5
Descriptor: COPPER (II) ION, GLYCEROL, Multicopper oxidase type 1
Authors:Rosenzweig, A.C, Lawton, T.L, Sayavedra-Soto, L.A, Arp, D.J.
Deposit date:2013-05-10
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of a nitrite reductase involved in nitrifier denitrification.
J.Biol.Chem., 288, 2013
4KNU
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BU of 4knu by Molmil
Copper nitrite reductase from Nitrosomonas europaea at pH 6.5
Descriptor: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Rosenzweig, A.C, Lawton, T.L, Sayavedra-Soto, L.A, Arp, D.J.
Deposit date:2013-05-10
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Characterization of a nitrite reductase involved in nitrifier denitrification.
J.Biol.Chem., 288, 2013
4LW5
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BU of 4lw5 by Molmil
Crystal structure of all-trans green fluorescent protein
Descriptor: Green fluorescent protein
Authors:Rosenman, D.J, Huang, Y.-M, Xia, K, Vanroey, P, Colon, W, Bystroff, C.
Deposit date:2013-07-26
Release date:2014-02-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Green-lighting green fluorescent protein: Faster and more efficient folding by eliminating a cis-trans peptide isomerization event.
Protein Sci., 23, 2014
4M7J
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BU of 4m7j by Molmil
Crystal structure of S25-26 in complex with Kdo(2.8)Kdo(2.4)Kdo trisaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, DI(HYDROXYETHYL)ETHER, ...
Authors:Haji-Ghassemi, O, Evans, S.V, Muller-Loennies, S, Saldova, R, Muniyappa, M, Brade, L, Rudd, P.M, Harvey, D.J, Kosma, P, Brade, H.
Deposit date:2013-08-12
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Groove-type Recognition of Chlamydiaceae-specific Lipopolysaccharide Antigen by a Family of Antibodies Possessing an Unusual Variable Heavy Chain N-Linked Glycan.
J.Biol.Chem., 289, 2014
4MDX
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BU of 4mdx by Molmil
Crystal structure of Bacillus subtilis MazF in complex with RNA
Descriptor: IODIDE ION, RNA, mRNA, ...
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2013-08-23
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis of mRNA Recognition and Cleavage by Toxin MazF and Its Regulation by Antitoxin MazE in Bacillus subtilis.
Mol.Cell, 52, 2013
4KXT
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BU of 4kxt by Molmil
Structure of human ARGONAUTE1 in complex with guide RNA
Descriptor: Protein argonaute-1, RNA
Authors:Nakanishi, K, Patel, D.J.
Deposit date:2013-05-28
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Eukaryote-Specific Insertion Elements Control Human ARGONAUTE Slicer Activity.
Cell Rep, 3, 2013

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