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PDB: 3016 件

2PTW
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Crystal Structure of the T. brucei enolase complexed with sulphate, identification of a metal binding site IV
分子名称: 1,2-ETHANEDIOL, Enolase, SULFATE ION, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PZK
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Crystal structure of the Bordetella bronchiseptica enzyme WbmG in complex with NAD
分子名称: MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative nucleotide sugar epimerase/ dehydratase
著者King, J.D, Harmer, N.J, Maskell, D.J, Blundell, T.L.
登録日2007-05-18
公開日2007-10-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.
J.Mol.Biol., 374, 2007
3SUX
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BU of 3sux by Molmil
Crystal structure of THF riboswitch, bound with THF
分子名称: 5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID, Riboswitch, SODIUM ION
著者Huang, L, Serganov, A, Patel, D.J.
登録日2011-07-11
公開日2011-09-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SUY
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BU of 3suy by Molmil
Crystal structure of THF riboswitch, unbound status
分子名称: riboswitch
著者Huang, L, Serganov, A, Patel, D.J.
登録日2011-07-11
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
3U5O
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BU of 3u5o by Molmil
Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-22)K9me3K14acK18ac histone peptide
分子名称: E3 ubiquitin-protein ligase TRIM33, Histone H3.1, ZINC ION
著者Wang, Z, Patel, D.J.
登録日2011-10-11
公開日2012-01-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A poised chromatin platform for TGF-beta access to master regulators
Cell(Cambridge,Mass.), 147, 2011
3U7U
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BU of 3u7u by Molmil
Crystal structure of extracellular region of human epidermal growth factor receptor 4 in complex with neuregulin-1 beta
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neuregulin 1, Receptor tyrosine-protein kinase erbB-4
著者Liu, P, Cleveland IV, T.E, Bouyain, S, Longo, P.A, Leahy, D.J.
登録日2011-10-14
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献A single ligand is sufficient to activate EGFR dimers.
Proc.Natl.Acad.Sci.USA, 109, 2012
3ZQ3
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BU of 3zq3 by Molmil
Crystal Structure of Rat Odorant Binding Protein 3 (OBP3)
分子名称: OBP3 PROTEIN
著者Portman, K.L, Long, J, Carr, S, Brand, L, Winzor, D.J, Searle, M, Scott, D.J.
登録日2013-03-05
公開日2014-03-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Enthalpy/Entropy Compensation Effects from Cavity Desolvation Underpin Broad Ligand Binding Selectivity for Rat Odorant Binding Protein 3
Biochemistry, 53, 2014
3TOR
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BU of 3tor by Molmil
Crystal structure of Escherichia coli NrfA with Europium bound
分子名称: CALCIUM ION, Cytochrome c nitrite reductase, EUROPIUM ION, ...
著者Lockwood, C.W.J, Clarke, T.A, Butt, J.N, Hemmings, A.M, Richardson, D.J.
登録日2011-09-06
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of the active site and calcium binding in cytochrome c nitrite reductases.
Biochem.Soc.Trans., 39, 2011
3U3F
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Structural basis for the interaction of Pyk2 PAT domain with paxillin LD motifs
分子名称: Paxillin LD2 peptide, Protein-tyrosine kinase 2-beta
著者Vanarotti, M, Miller, D.J, Guibao, C.C, Zheng, J.J.
登録日2011-10-05
公開日2012-10-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural and Mechanistic Insights into the Interaction between Pyk2 and Paxillin LD Motifs.
J.Mol.Biol., 426, 2014
3TFI
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BU of 3tfi by Molmil
DMSP-dependent demethylase from P. ubique - with substrate DMSP
分子名称: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, GLYCEROL, GcvT-like Aminomethyltransferase protein, ...
著者Schuller, D.J, Reisch, C.R, Moran, M.A, Whitman, W.B, Lanzilotta, W.N.
登録日2011-08-15
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of dimethylsulfoniopropionate-dependent demethylase from the marine organism Pelagabacter ubique.
Protein Sci., 21, 2012
3SOW
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BU of 3sow by Molmil
Structure of UHRF1 PHD finger in complex with histone H3K4me3 1-9 peptide
分子名称: E3 ubiquitin-protein ligase UHRF1, Histone H3, ZINC ION
著者Rajakumara, E, Patel, D.J.
登録日2011-06-30
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9501 Å)
主引用文献PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression.
Mol.Cell, 43, 2011
3SUH
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BU of 3suh by Molmil
Crystal structure of THF riboswitch, bound with 5-formyl-THF
分子名称: N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, Riboswitch, SODIUM ION
著者Huang, L, Serganov, A, Patel, D.J.
登録日2011-07-11
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
3T9L
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BU of 3t9l by Molmil
Structure of N-terminal DUSP-UBL domains of human USP15
分子名称: SULFATE ION, Ubiquitin carboxyl-terminal hydrolase 15
著者Harper, S, Besong, T.M.D, Emsley, J, Scott, D.J, Dreveny, I.
登録日2011-08-03
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the USP15 N-Terminal Domains: A beta-Hairpin Mediates Close Association between the DUSP and UBL Domains
Biochemistry, 50, 2011
3SKR
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BU of 3skr by Molmil
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cobalt Hexammine soak
分子名称: 2'-DEOXY-GUANOSINE, COBALT HEXAMMINE(III), MAGNESIUM ION, ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-23
公開日2011-08-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKZ
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BU of 3skz by Molmil
Crystal structure of the 2'- deoxyguanosine riboswitch bound to guanosine
分子名称: GUANOSINE, MAGNESIUM ION, RNA (68-MER), ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-23
公開日2011-08-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.605 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SLQ
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BU of 3slq by Molmil
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to guanosine-5'-monophosphate
分子名称: GUANOSINE-5'-MONOPHOSPHATE, RNA (68-MER), SUCCINIC ACID, ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-24
公開日2011-08-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SOU
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BU of 3sou by Molmil
Structure of UHRF1 PHD finger in complex with histone H3 1-9 peptide
分子名称: E3 ubiquitin-protein ligase UHRF1, Histone H3, ZINC ION
著者Rajakumara, E, Patel, D.J.
登録日2011-06-30
公開日2011-08-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8001 Å)
主引用文献PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression.
Mol.Cell, 43, 2011
3T0Q
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BU of 3t0q by Molmil
Motor Domain Structure of the Kar3-like kinesin from Ashbya gossypii
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, AGR253Wp, ...
著者Duan, D, Hnatchuk, D.J, Brenner, J, Davis, D, Allingham, J.S.
登録日2011-07-20
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of the Kar3-like kinesin motor domain from the filamentous fungus Ashbya gossypii.
Proteins, 80, 2012
3SKL
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BU of 3skl by Molmil
Crystal structure of the 2'- deoxyguanosine riboswitch bound to 2'-deoxyguanosine, iridium hexammine soak
分子名称: 2'-DEOXY-GUANOSINE, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-22
公開日2011-08-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKW
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BU of 3skw by Molmil
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cesium soak
分子名称: 2'-DEOXY-GUANOSINE, CESIUM ION, MAGNESIUM ION, ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-23
公開日2011-08-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3ULK
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BU of 3ulk by Molmil
E. coli Ketol-acid reductoisomerase in complex with NADPH and Mg2+
分子名称: Ketol-acid reductoisomerase, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Wong, S.H, Lonhienne, T.G.A, Winzor, D.J, Schenk, G, Guddat, L.W.
登録日2011-11-11
公開日2012-10-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bacterial and plant ketol-acid reductoisomerases have different mechanisms of induced fit during the catalytic cycle
J.Mol.Biol., 424, 2012
3UII
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BU of 3uii by Molmil
crystal structure of human Survivin in complex with H3(1-10) peptide
分子名称: Baculoviral IAP repeat-containing protein 5, ZINC ION, histone H3(1-10) peptide
著者Du, J, Patel, D.J.
登録日2011-11-04
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
3SXO
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BU of 3sxo by Molmil
Mycobacterium tuberculosis Eis protein initiates modulation of host immune responses by acetylation of DUSP16/MKP-7
分子名称: Enhanced intracellular survival protein
著者Kim, K.H, An, D.R, Yoon, J.Y, Kim, H.S, Yoon, H.J, Song, J.S, Im, H.N, Kim, J, Kim, D.J, Lee, S.J, Kim, H.J, Lee, J.Y, Suh, S.W.
登録日2011-07-15
公開日2012-07-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mycobacterium tuberculosis Eis protein initiates modulation of host immune responses by acetylation of DUSP16/MKP-7
To be Published
3SKI
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BU of 3ski by Molmil
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine
分子名称: 2'-DEOXY-GUANOSINE, MAGNESIUM ION, RNA (68-MER), ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-22
公開日2011-08-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3VBR
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BU of 3vbr by Molmil
Crystal structure of formaldehyde treated empty human Enterovirus 71 particle (room temperature)
分子名称: Genome Polyprotein, capsid protein VP0, capsid protein VP1, ...
著者Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
登録日2012-01-02
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012

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