Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1228 results

1DK6
DownloadVisualize
BU of 1dk6 by Molmil
NMR structure analysis of the DNA nine base pair duplex D(CATGAGTAC) D(GTAC(NP3)CATG)
Descriptor: 5'-D(CP*AP*TP*GP*AP*GP*TP*AP*CP*)-3', 5'-D(GP*TP*AP*CP*(NP3)P*CP*AP*TP*GP*)-3'
Authors:Klewer, D.A, Hoskins, A, Davisson, V.J, Bergstrom, D.E, LiWang, A.C.
Deposit date:1999-12-06
Release date:2000-01-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of a DNA duplex containing nucleoside analog 1-(2'-deoxy-beta-D-ribofuranosyl)-3-nitropyrrole and the structure of the unmodified control.
Nucleic Acids Res., 28, 2000
1NTG
DownloadVisualize
BU of 1ntg by Molmil
Crystal Structure of the EMAP II-like Cytokine Released from human tyrosyl-tRNA Synthetase
Descriptor: Tyrosyl-tRNA synthetase
Authors:Yang, X.-L, Skene, R.J, Mcree, D.E, Schimmel, P.
Deposit date:2003-01-29
Release date:2003-05-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of an EMAP-II-like Cytokine Released from a human tRNA Synthetase
Helv.Chim.Acta, 86, 2003
1PKG
DownloadVisualize
BU of 1pkg by Molmil
Structure of a c-Kit Kinase Product Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, c-kit protein
Authors:Mol, C.D, Lim, K.B, Sridhar, V, Zou, H, Chien, E.Y.T, Sang, B.-C, Nowakowski, J, Kassel, D.B, Cronin, C.N, McRee, D.E.
Deposit date:2003-06-05
Release date:2003-08-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of a c-Kit Product Complex Reveals the Basis for Kinase Transactivation.
J.Biol.Chem., 278, 2003
1PS6
DownloadVisualize
BU of 1ps6 by Molmil
Crystal structure of E.coli PdxA
Descriptor: 4-HYDROXY-L-THREONINE-5-MONOPHOSPHATE, 4-hydroxythreonine-4-phosphate dehydrogenase, ZINC ION
Authors:Sivaraman, J, Li, Y, Banks, J, Cane, D.E, Matte, A, Cygler, M.
Deposit date:2003-06-20
Release date:2003-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Escherichia coli PdxA, an Enzyme Involved in the Pyridoxal Phosphate Biosynthesis Pathway
J.Biol.Chem., 278, 2003
1PQQ
DownloadVisualize
BU of 1pqq by Molmil
NMR Structure of a Cyclic Polyamide-DNA Complex
Descriptor: 45-(3-AMINOPROPYL)-5,11,22,28,34-PENTAMETHYL-3,9,15,20,26,32,38,43-OCTAOXO-2,5,8,14,19,22,25,28,31,34,37,42,45,48-TETRADECAAZA-11-AZONIAHEPTACYCLO[42.2.1.1~4,7~.1~10,13~.1~21,24~.1~27,30~.1~33,36~]DOPENTACONTA-1(46),4(52),6,10(51),12,21(50),23,27(49),29,33(48),35,44(47)-DODECAENE, 5'-D(*CP*GP*CP*TP*AP*AP*CP*AP*GP*GP*C)-3', 5'-D(*GP*CP*CP*TP*GP*TP*TP*AP*GP*CP*G)-3'
Authors:Zhang, Q, Dwyer, T.J, Tsui, V, Case, D.A, Cho, J, Dervan, P.B, Wemmer, D.E.
Deposit date:2003-06-18
Release date:2004-06-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Structure of a Cyclic Polyamide-DNA Complex.
J.Am.Chem.Soc., 126, 2004
1PS7
DownloadVisualize
BU of 1ps7 by Molmil
Crystal structure of E.coli PdxA
Descriptor: 4-hydroxythreonine-4-phosphate dehydrogenase, ZINC ION
Authors:Sivaraman, J, Li, Y, Banks, J, Cane, D.E, Matte, A, Cygler, M.
Deposit date:2003-06-20
Release date:2003-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal Structure of Escherichia coli PdxA, an Enzyme Involved in the Pyridoxal Phosphate Biosynthesis Pathway
J.Biol.Chem., 278, 2003
1N46
DownloadVisualize
BU of 1n46 by Molmil
CRYSTAL STRUCTURE OF HUMAN TR BETA LIGAND-BINDING DOMAIN COMPLEXED WITH A POTENT SUBTYPE-SELECTIVE THYROMIMETIC
Descriptor: Thyroid hormone receptor Beta-1, [4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL
Authors:Dow, R.L, Schneider, S.R, Paight, E.S, Hank, R.F, Chiang, P, Cornelius, P, Lee, E, Newsome, W.P, Swick, A.G, Spitzer, J, Hargrove, D.M, Patterson, T.A, Pandit, J, Chrunyk, B.A, LeMotte, P.K, Danley, D.E, Rosner, M.H, Ammirati, M.J, Simons, S.P, Schulte, G.K, Tate, B.F, DaSilva-Jardine, P.
Deposit date:2002-10-30
Release date:2003-04-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a Novel Series of 6-Azauracil-Based Thyroid Hormone Receptor Ligands: Potent, TRbeta Subtype-Selective Thyromimetics
Bioorg.Med.Chem.Lett., 13, 2003
1MZD
DownloadVisualize
BU of 1mzd by Molmil
crystal structure of human pro-granzyme K
Descriptor: pro-granzyme K
Authors:Hink-Schauer, C, Estebanez-Perpina, E, Wilharm, E, Fuentes-Prior, P, Klinkert, W, Bode, W, Jenne, D.E.
Deposit date:2002-10-07
Release date:2003-01-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The 2.2-A Crystal Structure of Human Pro-granzyme K Reveals a Rigid Zymogen with Unusual Features
J.BIOL.CHEM., 277, 2002
1N3L
DownloadVisualize
BU of 1n3l by Molmil
Crystal structure of a human aminoacyl-tRNA synthetase cytokine
Descriptor: GLYCEROL, SULFATE ION, tyrosyl-tRNA synthetase
Authors:Yang, X.-L, Skene, R.J, McRee, D.E, Schimmel, P.
Deposit date:2002-10-28
Release date:2002-11-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal structure of a human aminoacyl-tRNA synthetase cytokine
Proc.Natl.Acad.Sci.USA, 99, 2002
1NP4
DownloadVisualize
BU of 1np4 by Molmil
CRYSTAL STRUCTURE OF NITROPHORIN 4 FROM RHODNIUS PROLIXUS
Descriptor: AMMONIA, PROTEIN (NITROPHORIN 4), PROTOPORPHYRIN IX CONTAINING FE
Authors:Andersen, J.F, Weichsel, A, Champagne, D.E, Balfour, C.A, Montfort, W.R.
Deposit date:1998-07-29
Release date:1998-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of nitrophorin 4 at 1.5 A resolution: transport of nitric oxide by a lipocalin-based heme protein.
Structure, 6, 1998
1NQC
DownloadVisualize
BU of 1nqc by Molmil
Crystal structures of Cathepsin S inhibitor complexes
Descriptor: Cathepsin S, N-[(1R)-2-(BENZYLSULFANYL)-1-FORMYLETHYL]-N-(MORPHOLIN-4-YLCARBONYL)-L-PHENYLALANINAMIDE
Authors:Pauly, T.A, Sulea, T, Ammirati, M, Sivaraman, J, Danley, D.E, Griffor, M.C, Kamath, A.V, Wang, I.K, Laird, E.R, Menard, R, Cygler, M, Rath, V.L.
Deposit date:2003-01-21
Release date:2003-04-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Specificity determinants of human cathepsin s revealed by crystal structures of complexes.
Biochemistry, 42, 2003
1NTC
DownloadVisualize
BU of 1ntc by Molmil
SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF NTRC WITH THREE ALANINE SUBSTITUTIONS
Descriptor: PROTEIN (NITROGEN REGULATION PROTEIN (NTRC))
Authors:Pelton, J.G, Kustu, S, Wemmer, D.E.
Deposit date:1999-05-26
Release date:1999-06-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain of NtrC with three alanine substitutions.
J.Mol.Biol., 292, 1999
1EXV
DownloadVisualize
BU of 1exv by Molmil
HUMAN LIVER GLYCOGEN PHOSPHORYLASE A COMPLEXED WITH GLCNAC AND CP-403,700
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, LIVER GLYCOGEN PHOSPHORYLASE, N-acetyl-beta-D-glucopyranosylamine, ...
Authors:Rath, V.L, Ammirati, M, Danley, D.E, Ekstrom, J.L, Hynes, T.R, Olson, T.V, Hoover, D.J.
Deposit date:2000-05-04
Release date:2000-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human liver glycogen phosphorylase inhibitors bind at a new allosteric site.
Chem.Biol., 7, 2000
1NY5
DownloadVisualize
BU of 1ny5 by Molmil
Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Lee, S.Y, de la Torre, A, Kustu, S, Nixon, B.T, Wemmer, D.E.
Deposit date:2003-02-11
Release date:2003-11-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains
Genes Dev., 17, 2003
1EY2
DownloadVisualize
BU of 1ey2 by Molmil
HUMAN HOMOGENTISATE DIOXYGENASE WITH FE(II)
Descriptor: FE (II) ION, HOMOGENTISATE 1,2-DIOXYGENASE
Authors:Timm, D.E, Titus, G.P, Penalva, M.A, Mueller, H.A, de Cordoba, S.M.
Deposit date:2000-05-05
Release date:2000-11-05
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human homogentisate dioxygenase.
Nat.Struct.Biol., 7, 2000
1Q35
DownloadVisualize
BU of 1q35 by Molmil
Crystal Structure of Pasteurella haemolytica Apo Ferric ion-Binding Protein A
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, iron binding protein FbpA
Authors:Shouldice, S.R, Dougan, D.R, Skene, R.J, Snell, G, Scheibe, D, Williams, P.A, Kirby, S, McRee, D.E, Schryvers, A.B, Tari, L.W.
Deposit date:2003-07-28
Release date:2003-11-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of Pasteurella haemolytica ferric ion-binding protein A reveals a novel class of bacterial iron-binding proteins
J.Biol.Chem., 278, 2003
1FVV
DownloadVisualize
BU of 1fvv by Molmil
THE STRUCTURE OF CDK2/CYCLIN A IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(7-OXO-7H-THIAZOLO[5,4-E]INDOL-8-YLMETHYL)-AMINO]-N-PYRIDIN-2-YL-BENZENESULFONAMIDE, CYCLIN A, CYCLIN-DEPENDENT KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
1PTM
DownloadVisualize
BU of 1ptm by Molmil
Crystal structure of E.coli PdxA
Descriptor: 4-hydroxythreonine-4-phosphate dehydrogenase, PHOSPHATE ION, ZINC ION
Authors:Sivaraman, J, Li, Y, Banks, J, Cane, D.E, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2003-06-23
Release date:2003-11-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structure of Escherichia coli PdxA, an Enzyme Involved in the Pyridoxal Phosphate Biosynthesis Pathway
J.Biol.Chem., 278, 2003
1PUX
DownloadVisualize
BU of 1pux by Molmil
NMR Solution Structure of BeF3-Activated Spo0F, 20 conformers
Descriptor: Sporulation initiation phosphotransferase F
Authors:Gardino, A.K, Volkman, B.F, Cho, H.S, Lee, S.Y, Wemmer, D.E, Kern, D.
Deposit date:2003-06-25
Release date:2003-08-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system.
J.Mol.Biol., 331, 2003
1P1V
DownloadVisualize
BU of 1p1v by Molmil
Crystal Structure of FALS-associated human Copper-Zinc Superoxide Dismutase (CuZnSOD) Mutant D125H to 1.4A
Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Elam, J.S, Malek, K, Rodriguez, J.A, Doucette, P.A, Taylor, A.B, Hayward, L.J, Cabelli, D.E, Valentine, J.S, Hart, P.J.
Deposit date:2003-04-14
Release date:2003-08-26
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:An Alternative Mechanism of Bicarbonate-mediated Peroxidation by Copper-Zinc Superoxide Dismutase: RATES ENHANCED VIA PROPOSED ENZYME-ASSOCIATED PEROXYCARBONATE INTERMEDIATE
J.Biol.Chem., 278, 2003
1P74
DownloadVisualize
BU of 1p74 by Molmil
CRYSTAL STRUCTURE OF SHIKIMATE DEHYDROGENASE (AROE) FROM HAEMOPHILUS INFLUENZAE
Descriptor: Shikimate 5-dehydrogenase
Authors:Ye, S, von Delft, F, Brooun, A, Knuth, M.W, Swanson, R.V, McRee, D.E.
Deposit date:2003-04-30
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of shikimate dehydrogenase (AroE) reveals a unique NADPH binding mode
J.Bacteriol., 185, 2003
1P8O
DownloadVisualize
BU of 1p8o by Molmil
Structural and Functional Importance of First-Shell Metal Ligands in the Binuclear Manganese Cluster of Arginase I.
Descriptor: Arginase 1, MANGANESE (II) ION
Authors:Cama, E, Emig, F.A, Ash, D.E, Christianson, D.W.
Deposit date:2003-05-07
Release date:2003-06-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Structural and functional importance of first-shell metal ligands in the binuclear manganese cluster of arginase I
Biochemistry, 42, 2003
1FYY
DownloadVisualize
BU of 1fyy by Molmil
HPRT GENE MUTATION HOTSPOT WITH A BPDE2(10R) ADDUCT
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*TP*GP*CP*CP*CP*TP*TP*GP*AP*CP*TP*A)-3', HPRT DNA WITH BENZO[A]PYRENE-ADDUCTED DA7
Authors:Volk, D.E, Rice, J.S, Luxon, B.A, Yeh, H.J.C, Liang, C, Xie, G, Sayer, J.M, Jerina, D.M, Gorenstein, D.G.
Deposit date:2000-10-03
Release date:2000-12-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR evidence for syn-anti interconversion of a trans opened (10R)-dA adduct of benzo[a]pyrene (7S,8R)-diol (9R,10S)-epoxide in a DNA duplex.
Biochemistry, 39, 2000
1OZO
DownloadVisualize
BU of 1ozo by Molmil
Three-dimensional solution structure of apo-S100P protein determined by NMR spectroscopy
Descriptor: S-100P protein
Authors:Lee, Y.-C, Volk, D.E, Thiviyanathan, V, Kleerekoper, Q, Gribenko, A.V, Zhang, S, Gorenstein, D.G, Makhatadze, G.I, Luxon, B.A.
Deposit date:2003-04-09
Release date:2004-04-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the Apo-S100P protein.
J.Biomol.Nmr, 29, 2004
1MK5
DownloadVisualize
BU of 1mk5 by Molmil
Wildtype Core-Streptavidin with Biotin at 1.4A.
Descriptor: BIOTIN, Streptavidin
Authors:Hyre, D.E, Le Trong, I, Merritt, E.A, Green, N.M, Stenkamp, R.E, Stayton, P.S.
Deposit date:2002-08-28
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Cooperative hydrogen bond interactions in the streptavidin-biotin system
Protein Sci., 15, 2006

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon