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PDB: 1222 results

1JL5
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Novel Molecular Architecture of YopM-a Leucine-rich Effector Protein from Yersinia pestis
Descriptor: CALCIUM ION, outer protein YopM
Authors:Evdokimov, A.G, Anderson, D.E, Routzahn, K.M, Waugh, D.S.
Deposit date:2001-07-15
Release date:2001-10-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unusual molecular architecture of the Yersinia pestis cytotoxin YopM: a leucine-rich repeat protein with the shortest repeating unit.
J.Mol.Biol., 312, 2001
1FA9
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HUMAN LIVER GLYCOGEN PHOSPHORYLASE A COMPLEXED WITH AMP
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCOGEN PHOSPHORYLASE, LIVER FORM, ...
Authors:Rath, V.L, Ammirati, M, LeMotte, P.K, Fennell, K.F, Mansour, M.N, Danley, D.E, Hynes, T.R, Schulte, G.K, Wasilko, D.J, Pandit, J.
Deposit date:2000-07-12
Release date:2000-08-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Activation of human liver glycogen phosphorylase by alteration of the secondary structure and packing of the catalytic core.
Mol.Cell, 6, 2000
1JML
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Conversion of Monomeric Protein L to an Obligate Dimer by Computational Protein Design
Descriptor: Protein L, ZINC ION
Authors:O'Neill, J.W, Kuhlman, B, Kim, D.E, Zhang, K.Y.J, Baker, D.
Deposit date:2001-07-19
Release date:2001-10-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conversion of monomeric protein L to an obligate dimer by computational protein design.
Proc.Natl.Acad.Sci.USA, 98, 2001
5D87
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Staphyloferrin B precursor biosynthetic enzyme SbnA Y152F/S185G variant
Descriptor: MAGNESIUM ION, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Kobylarz, M.J, Grigg, J.C, Liu, Y, Lee, M.S.F, Heinrichs, D.E, Murphy, M.E.P.
Deposit date:2015-08-15
Release date:2016-02-03
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Biochemistry, 55, 2016
1EXV
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HUMAN LIVER GLYCOGEN PHOSPHORYLASE A COMPLEXED WITH GLCNAC AND CP-403,700
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, LIVER GLYCOGEN PHOSPHORYLASE, N-acetyl-beta-D-glucopyranosylamine, ...
Authors:Rath, V.L, Ammirati, M, Danley, D.E, Ekstrom, J.L, Hynes, T.R, Olson, T.V, Hoover, D.J.
Deposit date:2000-05-04
Release date:2000-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human liver glycogen phosphorylase inhibitors bind at a new allosteric site.
Chem.Biol., 7, 2000
1FOC
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Cytochrome C557: improperly folded thermus thermophilus C552
Descriptor: CYTOCHROME RC557, HEME C
Authors:McRee, D.E, Williams, P.A, Fee, J.A, Bren, K.L.
Deposit date:2000-08-27
Release date:2000-11-08
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Recombinant cytochrome rC557 obtained from Escherichia coli cells expressing a truncated Thermus thermophilus cycA gene. Heme inversion in an improperly matured protein
J.Biol.Chem., 276, 2001
1I9F
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STRUCTURAL CHARACTERIZATION OF THE COMPLEX OF THE REV RESPONSE ELEMENT RNA WITH A SELECTED PEPTIDE
Descriptor: REV RESPONSE ELEMENT RNA, RSG-1.2 PEPTIDE
Authors:Zhang, Q, Harada, K, Cho, H.S, Frankel, A, Wemmer, D.E.
Deposit date:2001-03-19
Release date:2001-05-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural characterization of the complex of the Rev response element RNA with a selected peptide.
Chem.Biol., 8, 2001
1FC0
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HUMAN LIVER GLYCOGEN PHOSPHORYLASE COMPLEXED WITH N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
Descriptor: GLYCOGEN PHOSPHORYLASE, LIVER FORM, N-acetyl-beta-D-glucopyranosylamine, ...
Authors:Rath, V.L, Ammirati, M, LeMotte, P.K, Fennell, K.F, Mansour, M.M, Danley, D.E, Hynes, T.R, Schulte, G.K, Wasilko, D.J, Pandit, J.
Deposit date:2000-07-17
Release date:2000-08-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Activation of human liver glycogen phosphorylase by alteration of the secondary structure and packing of the catalytic core.
Mol.Cell, 6, 2000
1I52
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CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2-C-METHYLERYTHRITOL (CDP-ME) SYNTHASE (YGBP) INVOLVED IN MEVALONATE INDEPENDENT ISOPRENOID BIOSYNTHESIS
Descriptor: 4-DIPHOSPHOCYTIDYL-2-C-METHYLERYTHRITOL SYNTHASE, CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Richard, S.B, Bowman, M.E, Kwiatkowski, W, Kang, I, Chow, C, Lillo, M, Cane, D.E, Noel, J.P.
Deposit date:2001-02-23
Release date:2001-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of 4-diphosphocytidyl-2-C- methylerythritol synthetase involved in mevalonate- independent isoprenoid biosynthesis.
Nat.Struct.Biol., 8, 2001
1KFZ
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Solution Structure of C-terminal Sem-5 SH3 Domain (Ensemble of 16 Structures)
Descriptor: SEX MUSCLE ABNORMAL PROTEIN 5
Authors:Ferreon, J.C, Volk, D.E, Luxon, B.A, Gorenstein, D, Hilser, V.J.
Deposit date:2001-11-24
Release date:2003-05-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure, Dynamics and Thermodynamics of the Native State Ensemble of Sem-5 C-Terminal SH3 Domain
Biochemistry, 42, 2003
5ED0
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Structure of the Shigella flexneri VapC mutant D7N
Descriptor: tRNA(fMet)-specific endonuclease VapC
Authors:Xu, K, Dedic, E, Brodersen, D.E.
Deposit date:2015-10-20
Release date:2016-02-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri.
Proteins, 84, 2016
5DZ2
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Geosmin synthase from Streptomyces coelicolor N-terminal domain complexed with three Mg2+ ions and alendronic acid
Descriptor: ALENDRONATE, Germacradienol/geosmin synthase, MAGNESIUM ION
Authors:Harris, G.G, Lombardi, P.M, Pemberton, T.A, Matsui, T, Weiss, T.M, Cole, K.E, Koksal, M, Murphy, F.V, Vedula, L.S, Chou, W.K.W, Cane, D.E, Christianson, D.W.
Deposit date:2015-09-25
Release date:2015-12-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.111 Å)
Cite:Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alpha alpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.
Biochemistry, 54, 2015
1KEZ
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Crystal Structure of the Macrocycle-forming Thioesterase Domain of Erythromycin Polyketide Synthase (DEBS TE)
Descriptor: ERYTHRONOLIDE SYNTHASE
Authors:Tsai, S.-C, Miercke, L.J.W, Krucinski, J, Gokhale, R, Chen, J.C.-H, Foster, P.G, Cane, D.E, Khosla, C, Stroud, R.M.
Deposit date:2001-11-19
Release date:2002-01-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the macrocycle-forming thioesterase domain of the erythromycin polyketide synthase: versatility from a unique substrate channel.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KIY
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D100E trichodiene synthase
Descriptor: 1,2-ETHANEDIOL, trichodiene synthase
Authors:Rynkiewicz, M.J, Cane, D.E, Christianson, D.W.
Deposit date:2001-12-03
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystal structures of D100E trichodiene synthase and its pyrophosphate complex reveal the basis for terpene product diversity.
Biochemistry, 41, 2002
5ECY
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Structure of the Shigella flexneri VapC mutant D98N crystal form 2
Descriptor: tRNA(fMet)-specific endonuclease VapC
Authors:Xu, K, Dedic, E, Brodersen, D.E.
Deposit date:2015-10-20
Release date:2016-10-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis on the active site architecture of an activated VapC toxin from Shigella flexneri
to be published
1FJ7
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SOLUTION STRUCTURE OF NUCLEOLIN RBD1
Descriptor: NUCLEOLIN RBD1
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
1KH0
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Accurate Computer Base Design of a New Backbone Conformation in the Second Turn of Protein L
Descriptor: protein L
Authors:O'Neill, J.W, Kuhlman, B, Kim, D.E, Zhang, K.Y, Baker, D.
Deposit date:2001-11-28
Release date:2002-01-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Accurate computer-based design of a new backbone conformation in the second turn of protein L.
J.Mol.Biol., 315, 2002
1KIZ
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D100E trichodiene synthase complexed with pyrophosphate
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Rynkiewicz, M.J, Cane, D.E, Christianson, D.W.
Deposit date:2001-12-03
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray crystal structures of D100E trichodiene synthase and its pyrophosphate complex reveal the basis for terpene product diversity.
Biochemistry, 41, 2002
1IG0
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Crystal Structure of yeast Thiamin Pyrophosphokinase
Descriptor: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, Thiamin pyrophosphokinase
Authors:Baker, L.-J, Dorocke, J.A, Harris, R.A, Timm, D.E.
Deposit date:2001-04-16
Release date:2001-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of yeast thiamin pyrophosphokinase.
Structure, 9, 2001
1DI1
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CRYSTAL STRUCTURE OF ARISTOLOCHENE SYNTHASE FROM PENICILLIUM ROQUEFORTI
Descriptor: ARISTOLOCHENE SYNTHASE
Authors:Caruthers, J.M, Kang, I, Cane, D.E, Christianson, D.W, Rynkiewicz, M.J.
Deposit date:1999-11-28
Release date:2000-08-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure determination of aristolochene synthase from the blue cheese mold, Penicillium roqueforti.
J.Biol.Chem., 275, 2000
1D9Y
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NEISSERIA GONORRHOEAE FERRIC BINDING PROTEIN
Descriptor: FE (III) ION, PHOSPHATE ION, PROTEIN (PERIPLASMIC IRON-BINDING PROTEIN)
Authors:McRee, D.E, Bruns, C.M, Williams, P.A, Mietzner, T.A, Nunn, R.
Deposit date:1999-10-30
Release date:1999-11-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Iron Uptake in the Pathogen Neisseria gonorrhoeae
To be Published
1FEO
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Solution structure of omega-conotoxin MVIIA with C-terminal Gly
Descriptor: OMEGA-CONOTOXIN MVIIA-GLY
Authors:Goldenberg, D.P, Koehn, R.E, Gilbert, D.E, Wagner, G.
Deposit date:2000-07-21
Release date:2000-08-23
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of an omega-conotoxin precursor
Protein Sci., 10, 2001
1HQF
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CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH N-HYDROXY-L-ARGININE
Descriptor: ARGINASE 1, MANGANESE (II) ION, N-OMEGA-HYDROXY-L-ARGININE
Authors:Cox, J.D, Cama, E, Colleluori, D.M, Ash, D.E, Christianson, D.W.
Deposit date:2000-12-16
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanistic and metabolic inferences from the binding of substrate analogues and products to arginase.
Biochemistry, 40, 2001
1HM4
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N219L PENTALENENE SYNTHASE
Descriptor: PENTALENENE SYNTHASE
Authors:Seemann, M, Paschall, C.M, Christianson, D.W, Cane, D.E.
Deposit date:2000-12-04
Release date:2002-08-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Pentalenene synthase. Analysis of active site residues by site-directed mutagenesis.
J.Am.Chem.Soc., 124, 2002
1HQG
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CRYSTAL STRUCTURE OF THE H141C ARGINASE VARIANT COMPLEXED WITH PRODUCTS ORNITHINE AND UREA
Descriptor: ARGINASE 1, L-ornithine, MANGANESE (II) ION, ...
Authors:Cox, J.D, Cama, E, Colleluori, D.M, Ash, D.E, Christianson, D.W.
Deposit date:2000-12-16
Release date:2001-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanistic and metabolic inferences from the binding of substrate analogues and products to arginase.
Biochemistry, 40, 2001

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數據於2024-08-07公開中

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