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PDB: 1224 件
6HPB
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BU of 6hpb by Molmil
Crystal structure of the E.coli HicAB toxin-antitoxin complex
分子名称: Antitoxin HicB, SULFATE ION, mRNA interferase toxin HicA
著者Manav, M.C, Brodersen, D.E.
登録日2018-09-20
公開日2019-09-18
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019
4LZ3
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BU of 4lz3 by Molmil
F95H Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, HYDROGENPHOSPHATE ION, ...
著者Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
登録日2013-07-31
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
7ZJZ
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BU of 7zjz by Molmil
catalytically non active S532A mutant of oligopeptidase B from S. proteomaculans
分子名称: Oligopeptidase B, SPERMINE
著者Petrenko, D.E, Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Mikhailova, A.G, Timofeev, V.I, Rakitina, T.V.
登録日2022-04-12
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Elucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation
Crystals, 12, 2022
4LZ0
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BU of 4lz0 by Molmil
A236G Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
著者Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
登録日2013-07-31
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.754 Å)
主引用文献Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
4V4R
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BU of 4v4r by Molmil
Crystal structure of the whole ribosomal complex.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
登録日2005-09-30
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (5.9 Å)
主引用文献Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
1IBL
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BU of 1ibl by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCIN
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Ogle, J.M, Brodersen, D.E, Clemons Jr, W.M, Tarry, M.J, Carter, A.P, Ramakrishnan, V.
登録日2001-03-28
公開日2001-05-04
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Recognition of cognate transfer RNA by the 30S ribosomal subunit.
Science, 292, 2001
4V7K
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BU of 4v7k by Molmil
Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Neubauer, C, Gao, Y.-G, Andersen, K.R, Dunham, C.M, Kelley, A.C, Hentschel, J, Gerdes, K, Ramakrishnan, V, Brodersen, D.E.
登録日2009-11-02
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
6ICD
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BU of 6icd by Molmil
REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE
分子名称: ISOCITRATE DEHYDROGENASE
著者Hurley, J.H, Dean, A.M, Sohl, J.L, Koshlandjunior, D.E, Stroud, R.M.
登録日1990-05-30
公開日1991-10-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Regulation of an enzyme by phosphorylation at the active site.
Science, 249, 1990
1J56
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BU of 1j56 by Molmil
MINIMIZED AVERAGE STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURE INCORPORATING ACTIVE SITE CONTACTS
分子名称: BERYLLIUM TRIFLUORIDE ION, NITROGEN REGULATION PROTEIN NR(I)
著者Hastings, C.A, Lee, S.-Y, Cho, H.S, Yan, D, Kustu, S, Wemmer, D.E.
登録日2002-01-10
公開日2003-08-19
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003
6HPC
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BU of 6hpc by Molmil
Crystal structure of the HicB antitoxin from E. coli
分子名称: Antitoxin HicB
著者Manav, M.C, Brodersen, D.E.
登録日2018-09-20
公開日2019-09-18
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019
1IBK
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BU of 1ibk by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Ogle, J.M, Brodersen, D.E, Clemons Jr, W.M, Tarry, M.J, Carter, A.P, Ramakrishnan, V.
登録日2001-03-28
公開日2001-05-04
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Recognition of cognate transfer RNA by the 30S ribosomal subunit.
Science, 292, 2001
1IBM
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BU of 1ibm by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Ogle, J.M, Brodersen, D.E, Clemons Jr, W.M, Tarry, M.J, Carter, A.P, Ramakrishnan, V.
登録日2001-03-28
公開日2001-05-04
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Recognition of cognate transfer RNA by the 30S ribosomal subunit.
Science, 292, 2001
1RYC
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BU of 1ryc by Molmil
CYTOCHROME C PEROXIDASE W191G FROM SACCHAROMYCES CEREVISIAE
分子名称: BENZIMIDAZOLE, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
著者Fitzgerald, M.M, Musah, R, Mcree, D.E, Goodin, D.B.
登録日1996-05-10
公開日1996-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A ligand-gated, hinged loop rearrangement opens a channel to a buried artificial protein cavity.
Nat.Struct.Biol., 3, 1996
1HR0
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BU of 1hr0 by Molmil
CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Carter, A.P, Clemons Jr, W.M, Brodersen, D.E, Morgan-Warren, R.J, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-20
公開日2001-01-24
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of an initiation factor bound to the 30S ribosomal subunit.
Science, 291, 2001
6GFL
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BU of 6gfl by Molmil
Crystal structure of the Escherichia coli nucleosidase PpnN (apo form)
分子名称: Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase
著者Zhang, Y, Baerentsen, R.L, Gerdes, K, Brodersen, D.E.
登録日2018-05-01
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献(p)ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch.
Mol.Cell, 74, 2019
8BQP
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Hen Egg-White Lysozyme (HEWL) complexed with methyl-functionalised Anderson-Evans polyoxometalate
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQT
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Hen Egg-White Lysozyme (HEWL) complexed with two methyl-functionalised Anderson-Evans polyoxometalates
分子名称: CHLORIDE ION, Lysozyme C, Mn-Mo(6)-O(24)-C(10) cluster
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQQ
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Hen Egg-White Lysozyme (HEWL) complexed with amine-functionalised Anderson-Evans polyoxometalate
分子名称: CHLORIDE ION, Lysozyme C, Mn-Mo(6)-N(2)-O(24)-C(8) cluster
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQR
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BU of 8bqr by Molmil
Hen Egg-White Lysozyme (HEWL) complexed with biotin-functionalised Anderson-Evans polyoxometalate
分子名称: Anderson-Evans polyoxometalate (biotin-functionalised), CALCIUM ION, Lysozyme C
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
1HNX
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Brodersen, D.E, Clemons Jr, W.M, Carter, A.P, Morgan-Warren, R, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-08
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.
Cell(Cambridge,Mass.), 103, 2000
1FOX
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BU of 1fox by Molmil
NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, 33 STRUCTURES
分子名称: L11-C76
著者Markus, M.A, Hinck, A.P, Huang, S, Draper, D.E, Torchia, D.A.
登録日1996-09-13
公開日1997-03-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
Nat.Struct.Biol., 4, 1997
1HNW
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BU of 1hnw by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Brodersen, D.E, Clemons Jr, W.M, Carter, A.P, Morgan-Warren, R, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-08
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.
Cell(Cambridge,Mass.), 103, 2000
1HNZ
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Brodersen, D.E, Clemons Jr, W.M, Carter, A.P, Morgan-Warren, R, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-08
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.
Cell(Cambridge,Mass.), 103, 2000
1IKA
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STRUCTURE OF ISOCITRATE DEHYDROGENASE WITH ALPHA-KETOGLUTARATE AT 2.7 ANGSTROMS RESOLUTION: CONFORMATIONAL CHANGES INDUCED BY DECARBOXYLATION OF ISOCITRATE
分子名称: 2-OXOGLUTARIC ACID, CALCIUM ION, ISOCITRATE DEHYDROGENASE
著者Stoddard, B.L, Koshland Junior, D.E.
登録日1993-06-15
公開日1994-07-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of isocitrate dehydrogenase with alpha-ketoglutarate at 2.7-A resolution: conformational changes induced by decarboxylation of isocitrate.
Biochemistry, 32, 1993
1FOW
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NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, MINIMIZED AVERAGE STRUCTURE
分子名称: L11-C76
著者Markus, M.A, Hinck, A.P, Huang, S, Draper, D.E, Torchia, D.A.
登録日1996-09-13
公開日1997-03-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
Nat.Struct.Biol., 4, 1997

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