Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1151 results

5NG6
DownloadVisualize
BU of 5ng6 by Molmil
Crystal structure of FnCas12a bound to a crRNA
Descriptor: CRISPR-associated endonuclease Cpf1, MAGNESIUM ION, crRNA
Authors:Swarts, D.C, van der Oost, J, Jinek, M.
Deposit date:2017-03-16
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.342 Å)
Cite:Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a.
Mol. Cell, 66, 2017
1F99
DownloadVisualize
BU of 1f99 by Molmil
CRYSTAL STRUCTURE OF R-PHYCOCYANIN FROM POLYSIPHONIA AT 2.4 A RESOLUTION
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROBILIN, ...
Authors:Liang, D.C, Jiang, T, Chang, W.R.
Deposit date:2000-07-09
Release date:2001-07-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of R-phycocyanin and possible energy transfer pathways in the phycobilisome.
Biophys.J., 81, 2001
5NS8
DownloadVisualize
BU of 5ns8 by Molmil
Crystal structure of beta-glucosidase BglM-G1 mutant H75R from marine metagenome in complex with inhibitor 1-Deoxynojirimycin
Descriptor: 1-DEOXYNOJIRIMYCIN, GLYCEROL, SULFATE ION, ...
Authors:Mhaindarkar, D.C, Gasper, R, Lupilova, N, Leichert, L.I, Hofmann, E.
Deposit date:2017-04-25
Release date:2018-08-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Loss of a conserved salt bridge in bacterial glycosyl hydrolase BgIM-G1 improves substrate binding in temperate environments.
Commun Biol, 1, 2018
1FP0
DownloadVisualize
BU of 1fp0 by Molmil
SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE KAP-1 COREPRESSOR
Descriptor: KAP-1 COREPRESSOR, ZINC ION
Authors:Capili, A.D, Schultz, D.C, Rauscher III, F.J, Borden, K.L.B.
Deposit date:2000-08-29
Release date:2001-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the PHD domain from the KAP-1 corepressor: structural determinants for PHD, RING and LIM zinc-binding domains.
EMBO J., 20, 2001
5LS7
DownloadVisualize
BU of 5ls7 by Molmil
Complex of wild type E. coli alpha aspartate decarboxylase with its processing factor PanZ
Descriptor: ACETYL COENZYME *A, Aspartate 1-decarboxylase, CARBON DIOXIDE, ...
Authors:Monteiro, D.C.F, Webb, M.E, Pearson, A.R.
Deposit date:2016-08-22
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:The Mechanism of Regulation of Pantothenate Biosynthesis by the PanD-PanZAcCoA Complex Reveals an Additional Mode of Action for the Antimetabolite N-Pentyl Pantothenamide (N5-Pan).
Biochemistry, 56, 2017
1FIB
DownloadVisualize
BU of 1fib by Molmil
RECOMBINANT HUMAN GAMMA-FIBRINOGEN CARBOXYL TERMINAL FRAGMENT (RESIDUES 143-411) BOUND TO CALCIUM AT PH 6.0
Descriptor: CALCIUM ION, GAMMA-FIBRINOGEN CARBOXYL TERMINAL FRAGMENT
Authors:Yee, V.C, Teller, D.C.
Deposit date:1996-04-02
Release date:1997-04-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a 30 kDa C-terminal fragment from the gamma chain of human fibrinogen.
Structure, 5, 1997
1GGY
DownloadVisualize
BU of 1ggy by Molmil
HUMAN FACTOR XIII WITH YTTERBIUM BOUND IN THE ION SITE
Descriptor: PROTEIN (COAGULATION FACTOR XIII), YTTERBIUM (III) ION
Authors:Fox, B.A, Yee, V.C, Pederson, L.C, Trong, I.L, Bishop, P.D, Stenkamp, R.E, Teller, D.C.
Deposit date:1998-07-23
Release date:1999-02-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of the calcium binding site and a novel ytterbium site in blood coagulation factor XIII by x-ray crystallography.
J.Biol.Chem., 274, 1999
2N2Y
DownloadVisualize
BU of 2n2y by Molmil
Solution structure of the meiosis-expressed gene 1 (Meig1)
Descriptor: Meiosis-expressed gene 1 protein
Authors:Williams Jr, D.C, Walavalkar, N.M, Buchwald, W.A.
Deposit date:2015-05-16
Release date:2016-01-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dissecting the structural basis of MEIG1 interaction with PACRG.
Sci Rep, 6, 2016
1EBO
DownloadVisualize
BU of 1ebo by Molmil
CRYSTAL STRUCTURE OF THE EBOLA VIRUS MEMBRANE-FUSION SUBUNIT, GP2, FROM THE ENVELOPE GLYCOPROTEIN ECTODOMAIN
Descriptor: CHLORIDE ION, EBOLA VIRUS ENVELOPE PROTEIN CHIMERA CONSISTING OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO A FRAGMENT OF GP2, ZINC ION
Authors:Weissenhorn, W, Carfi, A, Lee, K.H, Skehel, J.J, Wiley, D.C.
Deposit date:1998-11-03
Release date:1999-07-02
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the Ebola virus membrane fusion subunit, GP2, from the envelope glycoprotein ectodomain.
Mol.Cell, 2, 1998
5NS6
DownloadVisualize
BU of 5ns6 by Molmil
Crystal structure of beta-glucosidase BglM-G1 from marine metagenome
Descriptor: Beta-glucosidase, GLYCEROL, SULFATE ION
Authors:Mhaindarkar, D.C, Gasper, R, Lupilova, N, Leichert, L.I, Hofmann, E.
Deposit date:2017-04-25
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Loss of a conserved salt bridge in bacterial glycosyl hydrolase BgIM-G1 improves substrate binding in temperate environments.
Commun Biol, 1, 2018
1FYT
DownloadVisualize
BU of 1fyt by Molmil
CRYSTAL STRUCTURE OF A COMPLEX OF A HUMAN ALPHA/BETA-T CELL RECEPTOR, INFLUENZA HA ANTIGEN PEPTIDE, AND MHC CLASS II MOLECULE, HLA-DR1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ HA1 PEPTIDE CHAIN, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Hennecke, J, Carfi, A, Wiley, D.C.
Deposit date:2000-10-03
Release date:2000-11-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of a covalently stabilized complex of a human alphabeta T-cell receptor, influenza HA peptide and MHC class II molecule, HLA-DR1.
EMBO J., 19, 2000
5XUA
DownloadVisualize
BU of 5xua by Molmil
The ligand-free dimer of chemoreceptor MCP2201 ligand binding domain
Descriptor: Methyl-accepting chemotaxis sensory transducer
Authors:Hong, Y, Li, D.F, Wang, D.C.
Deposit date:2017-06-23
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The ligand-binding domain of a chemoreceptor from Comamonas testosteroni has a previously unknown homotrimeric structure.
Mol.Microbiol., 2019
1DO6
DownloadVisualize
BU of 1do6 by Molmil
CRYSTAL STRUCTURE OF SUPEROXIDE REDUCTASE IN THE OXIDIZED STATE AT 2.0 ANGSTROM RESOLUTION
Descriptor: FE (III) ION, SUPEROXIDE REDUCTASE
Authors:Yeh, A.P, Hu, Y, Jenney Junior, F.E, Adams, M.W, Rees, D.C.
Deposit date:1999-12-19
Release date:2000-03-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the superoxide reductase from Pyrococcus furiosus in the oxidized and reduced states.
Biochemistry, 39, 2000
5YZ2
DownloadVisualize
BU of 5yz2 by Molmil
the cystathionine-beta-synthase (CBS) domain of magnesium and cobalt efflux protein CorC in complex with both C2'- and C3'-endo AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Magnesium and cobalt efflux protein CorC
Authors:Feng, N, Qi, C, Li, D.F, Wang, D.C.
Deposit date:2017-12-12
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The C2'- and C3'-endo equilibrium for AMP molecules bound in the cystathionine-beta-synthase domain.
Biochem. Biophys. Res. Commun., 497, 2018
5NS7
DownloadVisualize
BU of 5ns7 by Molmil
Crystal structure of beta-glucosidase BglM-G1 mutant H75R from marine metagenome
Descriptor: GLYCEROL, SULFATE ION, beta-glucosidase M - G1
Authors:Mhaindarkar, D.C, Gasper, R, Lupilova, N, Leichert, L.I, Hofmann, E.
Deposit date:2017-04-25
Release date:2018-08-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Loss of a conserved salt bridge in bacterial glycosyl hydrolase BgIM-G1 improves substrate binding in temperate environments.
Commun Biol, 1, 2018
1G1M
DownloadVisualize
BU of 1g1m by Molmil
ALL-FERROUS NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII
Descriptor: IRON/SULFUR CLUSTER, NITROGENASE IRON PROTEIN
Authors:Strop, P, Takahara, P.M, Chiu, H.-J, Angove, H.C, Burgess, B.K, Rees, D.C.
Deposit date:2000-10-12
Release date:2001-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii.
Biochemistry, 40, 2001
1G5C
DownloadVisualize
BU of 1g5c by Molmil
CRYSTAL STRUCTURE OF THE 'CAB' TYPE BETA CLASS CARBONIC ANHYDRASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BETA-CARBONIC ANHYDRASE, CALCIUM ION, ...
Authors:Strop, P, Smith, K.S, Iverson, T.M, Ferry, J.G, Rees, D.C.
Deposit date:2000-10-31
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the "cab"-type beta class carbonic anhydrase from the archaeon Methanobacterium thermoautotrophicum.
J.Biol.Chem., 276, 2001
1G8A
DownloadVisualize
BU of 1g8a by Molmil
PYROCOCCUS HORIKOSHII FIBRILLARIN PRE-RRNA PROCESSING PROTEIN
Descriptor: FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
Authors:Boisvert, D.C, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-11-16
Release date:2003-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Structural Approach to Gene Function and Structure Quality for Pyrococcus horikoshii Fibrillarin
To be Published
1GGU
DownloadVisualize
BU of 1ggu by Molmil
HUMAN FACTOR XIII WITH CALCIUM BOUND IN THE ION SITE
Descriptor: CALCIUM ION, PROTEIN (COAGULATION FACTOR XIII)
Authors:Fox, B.A, Yee, V.C, Pederson, L.C, Trong, I.L, Bishop, P.D, Stenkamp, R.E, Teller, D.C.
Deposit date:1998-07-22
Release date:1999-09-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of the calcium binding site and a novel ytterbium site in blood coagulation factor XIII by x-ray crystallography.
J.Biol.Chem., 274, 1999
5X80
DownloadVisualize
BU of 5x80 by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887 COMPLEX WITH SALICYLIC ACID
Descriptor: 2-HYDROXYBENZOIC ACID, SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv2887
Authors:Gao, Y.R, Li, D.F, Wang, D.C, Bi, L.J.
Deposit date:2017-02-28
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis
Sci Rep, 7, 2017
5Y6G
DownloadVisualize
BU of 5y6g by Molmil
PilZ domain with c-di-GMP of YcgR from Escherichia coli
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Flagellar brake protein YcgR, SULFATE ION
Authors:Hou, Y.J, Wang, D.C, Li, D.F.
Deposit date:2017-08-11
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility inEscherichia coli.
J.Biol.Chem., 295, 2020
5Y6H
DownloadVisualize
BU of 5y6h by Molmil
Crystal structure of YcgR-N domain of YcgR from Escherichia coli
Descriptor: Flagellar brake protein YcgR
Authors:Hou, Y.J, Yang, W.S, Wang, D.C, Li, D.F.
Deposit date:2017-08-11
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.774 Å)
Cite:Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility inEscherichia coli.
J.Biol.Chem., 295, 2020
2KY8
DownloadVisualize
BU of 2ky8 by Molmil
Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target methylated DNA sequence
Descriptor: DNA (5'-D(*GP*AP*GP*CP*(5CM)P*GP*AP*TP*(TED)P*CP*C)-3'), DNA (5'-D(*GP*GP*AP*AP*TP*(5CM)P*GP*GP*CP*(TED)P*C)-3'), MANGANESE (II) ION, ...
Authors:Williams Jr, D.C, Scarsdale Jr, J.N.
Deposit date:2010-05-18
Release date:2011-05-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target-methylated DNA sequence.
Nucleic Acids Res., 39, 2011
1G21
DownloadVisualize
BU of 1g21 by Molmil
MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Chiu, H.-J, Peters, J.W, Lanzilotta, W.N, Ryle, M.J, Seefeldt, L.C, Howard, J.B, Rees, D.C.
Deposit date:2000-10-16
Release date:2001-01-31
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein.
Biochemistry, 40, 2001
6AWL
DownloadVisualize
BU of 6awl by Molmil
Crystal structure of human Coq9
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Ubiquinone biosynthesis protein COQ9, ...
Authors:Bingman, C.A, Lohman, D.C, Smith, R.W, Pagliarini, D.J, Mitochondrial Protein Partnership (MPP)
Deposit date:2017-09-05
Release date:2019-02-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.
Mol. Cell, 73, 2019

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon