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PDB: 22202 results

8AON
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BU of 8aon by Molmil
Oxidoreductase fragment of human QSOX1 in complex with a Fab fragment of a humanized anti-QSOX1 antibody
Descriptor: GLYCEROL, Heavy chain, Light chain, ...
Authors:Khmelnitsky, L, Fass, D.
Deposit date:2022-08-08
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reliable energy-based antibody humanization and stabilization
To Be Published
7ORE
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BU of 7ore by Molmil
Crystal structure of JNK3 in complex with light-activated covalent inhibitor MR-II-249 with both non-covalent and covalent binding modes (compound 4)
Descriptor: 1,2-ETHANEDIOL, 4-(dimethylamino)-N-[(5Z)-9-[[4-[5-(4-fluorophenyl)-3-methyl-2-methylsulfanyl-imidazol-4-yl]pyridin-2-yl]amino]-11,12-dihydrobenzo[c][1,2]benzodiazocin-2-yl]butanamide, Mitogen-activated protein kinase 10
Authors:Chaikuad, A, Reynders, M, Trauner, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-06-05
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Controlling the Covalent Reactivity of a Kinase Inhibitor with Light.
Angew.Chem.Int.Ed.Engl., 60, 2021
1NJ2
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BU of 1nj2 by Molmil
Crystal structure of Prolyl-tRNA Synthetase from Methanothermobacter thermautotrophicus
Descriptor: MAGNESIUM ION, Proline-tRNA Synthetase, ZINC ION
Authors:Kamtekar, S, Kennedy, W.D, Wang, J, Stathopoulos, C, Soll, D, Steitz, T.A.
Deposit date:2002-12-30
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases
Proc.Natl.Acad.Sci.USA, 100, 2003
7P8K
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BU of 7p8k by Molmil
Crystal structure of in planta processed AvrRps4 in complex with the WRKY domain of RRS1
Descriptor: Avirulence protein,Avirulence protein, Disease resistance protein RRS1, ZINC ION
Authors:Mukhi, N, Brown, H, Gorenkin, D, Ding, P, Bentham, A.R, Jones, J.D.G, Banfield, M.J.
Deposit date:2021-07-23
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Perception of structurally distinct effectors by the integrated WRKY domain of a plant immune receptor.
Proc.Natl.Acad.Sci.USA, 118, 2021
2X95
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BU of 2x95 by Molmil
Crystal structure of AnCE-lisinopril-tryptophan analogue, lisW-S complex
Descriptor: (S)-1-N2-(1-CARBOXY-3-PHENYLPROPYL)-L-LYSYL-L-TRYPTOPHAN, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Akif, M, Georgiadis, D, Mahajan, A, Dive, V, Sturrock, E.D, Isaac, R.E, Acharya, K.R.
Deposit date:2010-03-14
Release date:2010-06-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:High Resolution Crystal Structures of Drosophila Melanogaster Angiotensin Converting Enzyme in Complex with Novel Inhibitors and Anti- Hypertensive Drugs.
J.Mol.Biol., 400, 2010
7OSD
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BU of 7osd by Molmil
NMR Solution Structure of Peptide 12: First-in-class cyclic Temporin L analogue with antibacterial and antibiofilm activities
Descriptor: PHE-VAL-PRO-TRP-PHE-LYS-LYS-PHE-DLE-GLU-ARG-ILE-LEU-NH2
Authors:Brancaccio, D, Carotenuto, A.
Deposit date:2021-06-08
Release date:2021-08-11
Last modified:2021-08-25
Method:SOLUTION NMR
Cite:First-in-Class Cyclic Temporin L Analogue: Design, Synthesis, and Antimicrobial Assessment.
J.Med.Chem., 64, 2021
7P5M
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BU of 7p5m by Molmil
Cryo-EM structure of human TTYH2 in lipid nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein tweety homolog 2
Authors:Sukalskaia, A, Straub, M.S, Sawicka, M, Deneka, D, Dutzler, R.
Deposit date:2021-07-14
Release date:2021-08-11
Last modified:2021-09-08
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Cryo-EM structures of the TTYH family reveal a novel architecture for lipid interactions.
Nat Commun, 12, 2021
7OLZ
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BU of 7olz by Molmil
Crystal structure of the SARS-CoV-2 RBD with neutralizing-VHHs Re5D06 and Re9F06
Descriptor: 3-[BENZYL(DIMETHYL)AMMONIO]PROPANE-1-SULFONATE, Nanobody Re5D06, Nanobody Re9F06, ...
Authors:Aksu, M, Guttler, T, Gorlich, D.
Deposit date:2021-05-20
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Neutralization of SARS-CoV-2 by highly potent, hyperthermostable, and mutation-tolerant nanobodies.
Embo J., 40, 2021
2WHU
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BU of 2whu by Molmil
Fluorescent Protein mKeima at pH 8.0
Descriptor: LARGE STOKES SHIFT FLUORESCENT PROTEIN
Authors:Violot, S, Carpentier, P, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-06
Release date:2009-08-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Reverse Ph-Dependence of Chromophore Protonation Explains the Large Stokes Shift of the Red Fluorescent Protein Mkeima
J.Am.Chem.Soc., 131, 2009
7P54
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BU of 7p54 by Molmil
Cryo-EM structure of human TTYH2 in GDN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein tweety homolog 2
Authors:Sukalskaia, A, Straub, M.S, Sawicka, M, Deneka, D, Dutzler, R.
Deposit date:2021-07-14
Release date:2021-08-11
Last modified:2021-09-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the TTYH family reveal a novel architecture for lipid interactions.
Nat Commun, 12, 2021
7ON5
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BU of 7on5 by Molmil
Crystal structure of the SARS-CoV-2 neutralizing nanobody Re5D06
Descriptor: 1,2-ETHANEDIOL, ETHANOL, Nanobody Re5D06
Authors:Aksu, M, Guttler, T, Gorlich, D.
Deposit date:2021-05-25
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Neutralization of SARS-CoV-2 by highly potent, hyperthermostable, and mutation-tolerant nanobodies.
Embo J., 40, 2021
7P5J
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BU of 7p5j by Molmil
Cryo-EM structure of human TTYH1 in GDN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein tweety homolog 1
Authors:Sukalskaia, A, Straub, M.S, Sawicka, M, Deneka, D, Dutzler, R.
Deposit date:2021-07-14
Release date:2021-08-11
Last modified:2021-09-08
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of the TTYH family reveal a novel architecture for lipid interactions.
Nat Commun, 12, 2021
7OS8
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BU of 7os8 by Molmil
NMR SOLUTION STRUCTURE OF [Pro3,DLeu9]TL
Descriptor: PHE-VAL-PRO-TRP-PHE-SER-LYS-PHE-DLE-GLY-ARG-ILE-LEU-NH2
Authors:Brancaccio, D, Carotenuto, A.
Deposit date:2021-06-08
Release date:2021-08-11
Last modified:2021-08-25
Method:SOLUTION NMR
Cite:First-in-Class Cyclic Temporin L Analogue: Design, Synthesis, and Antimicrobial Assessment.
J.Med.Chem., 64, 2021
8AOL
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BU of 8aol by Molmil
Crystal structure of S-layer protein SlpX from Lactobacillus acidophilus, domain III (aa 363-499)
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sagmeister, T, Damisch, E, Eder, M, Dordic, A, Vejzovic, D, Pavkov-Keller, T.
Deposit date:2022-08-08
Release date:2023-08-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The molecular architecture of Lactobacillus S-layer: Assembly and attachment to teichoic acids.
Proc.Natl.Acad.Sci.USA, 121, 2024
7P1W
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BU of 7p1w by Molmil
Crystal structure of a R51 R53 double mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans
Descriptor: Putative regulatory protein GTNG_1019
Authors:Altegoer, F, Mrusek, D, Bange, G.
Deposit date:2021-07-02
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional characterization of the bacterial biofilm activator RemA.
Nat Commun, 12, 2021
7P4Z
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BU of 7p4z by Molmil
Crystal structure of avidin from hen egg white in space group C2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Bellini, D, Gorrec, F.
Deposit date:2021-07-13
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The FUSION protein crystallization screen.
J.Appl.Crystallogr., 55, 2022
7OYG
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BU of 7oyg by Molmil
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase
Descriptor: RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3'), RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3'), SARS-CoV-2 RNA-dependent RNA polymerase (nsp12), ...
Authors:Jochheim, F.A, Tegunov, D, Hillen, H.S, Schmitzova, J, Kokic, G, Dienemann, C, Cramer, P.
Deposit date:2021-06-24
Release date:2021-08-25
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:The structure of a dimeric form of SARS-CoV-2 polymerase
Communications Biology, 4, 2021
2VXS
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BU of 2vxs by Molmil
Structure of IL-17A in complex with a potent, fully human neutralising antibody
Descriptor: FAB FRAGMENT, INTERLEUKIN-17A, SULFATE ION
Authors:Gerhardt, S, Hargreaves, D, Pauptit, R.A, Davies, R.A, Russell, C, Welsh, F, Tuske, S.J, Coales, S.J, Hamuro, Y, Needham, M.R.C, Langham, C, Barker, W, Bell, P, Aziz, A, Smith, M.J, Dawson, S, Abbott, W.M.
Deposit date:2008-07-09
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure of Il-17A in Complex with a Potent, Fully Human Neutralising Antibody.
J.Mol.Biol., 394, 2009
1NIY
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BU of 1niy by Molmil
THREE DIMENSIONAL SOLUTION STRUCTURE OF HAINANTOXIN-IV BY 2D 1H-NMR
Descriptor: HAINANTOXIN-IV
Authors:Li, D, Lu, S, Gu, X, Liang, S.
Deposit date:2002-12-30
Release date:2003-01-14
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-Activity Relationships of Hainantoxin-IV and Structure Determination of Active and Inactive Sodium Channel Blockers.
J.Biol.Chem., 279, 2004
2VTD
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BU of 2vtd by Molmil
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
Descriptor: N-({6-[(4-CYANO-2-FLUOROBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)-D-GLUTAMIC ACID, SULFATE ION, UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
Authors:Humljan, J, Kotnik, M, Contreras-Martel, C, Blanot, D, Urleb, U, Dessen, A, Solmajer, T, Gobec, S.
Deposit date:2008-05-14
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Novel naphthalene-N-sulfonyl-D-glutamic acid derivatives as inhibitors of MurD, a key peptidoglycan biosynthesis enzyme.
J. Med. Chem., 51, 2008
1NJR
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BU of 1njr by Molmil
Crystal structure of yeast ymx7, an ADP-ribose-1''-monophosphatase
Descriptor: 32.1 kDa protein in ADH3-RCA1 intergenic region, Xylitol
Authors:Kumaran, D, Eswaramoorthy, S, Studier, F.W, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-01-02
Release date:2004-08-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme
Protein Sci., 14, 2005
7P4W
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BU of 7p4w by Molmil
Crystal structure of alpha-amylase from Aspergillus oryzae in space group I222
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ...
Authors:Bellini, D, Gorrec, F.
Deposit date:2021-07-13
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The FUSION protein crystallization screen.
J.Appl.Crystallogr., 55, 2022
2VWL
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BU of 2vwl by Molmil
Aminopyrrolidine Factor Xa inhibitor
Descriptor: 5-CHLORO-THIOPHENE-2-CARBOXYLIC ACID ((3R,5S)-1-{[2-FLUORO-4-(2-OXO-PYRIDIN-1-YL)-PHENYLCARBAMOYL]-METHYL}-5-HYDROXYMETHYL-PYRROLIDIN-3-YL)-AMIDE, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ...
Authors:Groebke-Zbinden, K, Banner, D.W, Benz, J.M, Blasco, F, Decoret, G, Himber, J, Kuhn, B, Panday, N, Ricklin, F, Risch, P, Schlatter, D, Stahl, M, Unger, R, Haap, W.
Deposit date:2008-06-26
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design of Novel Aminopyrrolidine Factor Xa Inhibitors from a Screening Hit.
Eur.J.Med.Chem., 44, 2009
1NKQ
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BU of 1nkq by Molmil
Crystal structure of yeast ynq8, a fumarylacetoacetate hydrolase family protein
Descriptor: ACETIC ACID, CALCIUM ION, Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region, ...
Authors:Eswaramoorthy, S, Kumaran, D, Daniels, B, Studier, F.W, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-01-03
Release date:2004-06-15
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crtystal Structure of Yeast Hypothetical Protein YNQ8_YEAST
To be Published
2W9E
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BU of 2w9e by Molmil
Structure of ICSM 18 (anti-Prp therapeutic antibody) Fab fragment complexed with human Prp fragment 119-231
Descriptor: ICSM 18-ANTI-PRP THERAPEUTIC FAB HEAVY CHAIN, ICSM 18-ANTI-PRP THERAPEUTIC FAB LIGHT CHAIN, MAJOR PRION PROTEIN, ...
Authors:Antonyuk, S.V, Trevitt, C.R, Strange, R.W, Jackson, G.S, Sangar, D, Batchelor, M, Jones, S, Georgiou, T, Cooper, S, Fraser, C, Khalili-Shirazi, A, Clarke, A.R, Hasnain, S.S, Collinge, J.
Deposit date:2009-01-23
Release date:2009-02-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Human Prion Protein Bound to a Therapeutic Antibody.
Proc.Natl.Acad.Sci.USA, 106, 2009

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