Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 53012 件

7B8V
DownloadVisualize
BU of 7b8v by Molmil
Circular permutant of ribosomal protein S6, P54-55
分子名称: 30S ribosomal protein S6
著者Wang, H, Logan, D.T, Oliveberg, M.
登録日2020-12-13
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.863 Å)
主引用文献Circular permutant of ribosomal protein S6, P54-55
To Be Published
8IK7
DownloadVisualize
BU of 8ik7 by Molmil
Cryo-EM structure of hnRAC1 fibril.
分子名称: GLY-PHE-GLY-GLY-ASN-ASP-ASN-PHE-GLY
著者Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
登録日2023-02-28
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Formed fibrils of hnRNP A1 reversible amyloid core GFGGNDNFG (residues 209-217)
To Be Published
6YCY
DownloadVisualize
BU of 6ycy by Molmil
Plasmodium falciparum Myosin A full-length, post-rigor state
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Moussaoui, D, Robblee, J.P, Auguin, D, Krementsova, E.B, Robert-Paganin, J, Trybus, K.M, Houdusse, A.
登録日2020-03-19
公開日2020-11-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Full-length Plasmodium falciparum myosin A and essential light chain PfELC structures provide new anti-malarial targets.
Elife, 9, 2020
7JV6
DownloadVisualize
BU of 7jv6 by Molmil
SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, S2H13 Fab heavy chain, ...
著者Park, Y.J, Tortorici, M.A, Walls, A.C, Czudnochowski, N, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
登録日2020-08-20
公開日2020-10-14
最終更新日2021-06-23
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell, 183, 2020
5KVF
DownloadVisualize
BU of 5kvf by Molmil
Zika specific antibody, ZV-64, bound to ZIKA envelope DIII
分子名称: GLYCEROL, ZV-64 Antibody Fab Heavy Chain, ZV-64 Antibody Fab Light Chain, ...
著者Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-14
公開日2016-08-03
最終更新日2016-08-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of Zika Virus-Specific Antibody Protection.
Cell, 166, 2016
8EAX
DownloadVisualize
BU of 8eax by Molmil
Octameric prenyltransferase domain of fusicoccadiene Synthase with C2 symmetry sans transiently associating cyclase domains
分子名称: Fusicoccadiene synthase
著者Faylo, J.L, van Eeuwen, T, Christianson, D.W.
登録日2022-08-29
公開日2022-11-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Transient Prenyltransferase-Cyclase Association in Fusicoccadiene Synthase, an Assembly-Line Terpene Synthase.
Biochemistry, 61, 2022
5NMF
DownloadVisualize
BU of 5nmf by Molmil
868 TCR in complex with HLA A02 presenting SLYNTIATL
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
登録日2017-04-05
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
4X7C
DownloadVisualize
BU of 4x7c by Molmil
Crystal structure of Saga-2006 GII.4 P domain in complex with Nano-85
分子名称: Nano-85 Nanobody, VP1
著者Koromyslova, A.D, Hansman, G.S.
登録日2014-12-09
公開日2014-12-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nanobody binding to a conserved epitope promotes norovirus particle disassembly.
J.Virol., 89, 2015
5A58
DownloadVisualize
BU of 5a58 by Molmil
The structure of GH101 D764N mutant from Streptococcus pneumoniae TIGR4 in complex with serinyl T-antigen
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CITRIC ACID, ...
著者Gregg, K.J, Suits, M.D.L, Deng, L, Vocadlo, D.J, Boraston, A.B.
登録日2015-06-16
公開日2015-09-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Analysis of a Family 101 Glycoside Hydrolase in Complex with Carbohydrates Reveals Insights Into its Mechanism.
J.Biol.Chem., 290, 2015
7P06
DownloadVisualize
BU of 7p06 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, MAGNESIUM ION, ...
著者Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
登録日2021-06-29
公開日2021-11-10
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P05
DownloadVisualize
BU of 7p05 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs, ...
著者Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
登録日2021-06-29
公開日2021-11-10
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
8UGY
DownloadVisualize
BU of 8ugy by Molmil
Serotonin 1E receptor (5-HT1eR)-Gi1 Complex bound with Mianserin
分子名称: 5-hydroxytryptamine receptor 1E, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Zilberg, G, Warren, A.L, Wacker, D.
登録日2023-10-06
公開日2024-05-01
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structural insights into the unexpected agonism of tetracyclic antidepressants at serotonin receptors 5-HT 1e R and 5-HT 1F R.
Sci Adv, 10, 2024
8E9J
DownloadVisualize
BU of 8e9j by Molmil
Crystal structure of E. coli aspartate aminotransferase mutant HEX in the ligand-free form at 278 K
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C.
登録日2022-08-26
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.
Nat Commun, 14, 2023
8E9P
DownloadVisualize
BU of 8e9p by Molmil
Crystal structure of wild-type E. coli aspartate aminotransferase in the ligand-free form at 278 K
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C.
登録日2022-08-26
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.
Nat Commun, 14, 2023
8P1R
DownloadVisualize
BU of 8p1r by Molmil
Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant.
分子名称: 1,2-ETHANEDIOL, Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant, MAGNESIUM ION
著者Owen, C.D, Penner, M, Gascuena, A.N, Wu, H, Hernando, P.J, Monaco, S, Le Gall, G, Gardner, R, Ndeh, D, Urbanowicz, P.A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
登録日2023-05-12
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.659 Å)
主引用文献Exploring sequence, structure and function of microbial fucosidases from glycoside hydrolase GH29 family
To Be Published
8W3X
DownloadVisualize
BU of 8w3x by Molmil
Crystal structure of IRAK4 in complex with compound 6
分子名称: 7-ethoxy-1-{[(2S)-5-oxopyrrolidin-2-yl]methoxy}isoquinoline-6-carboxamide, Interleukin-1 receptor-associated kinase 4
著者Han, S, Knafels, J.D.
登録日2024-02-22
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.765 Å)
主引用文献In Retrospect: Root-Cause Analysis of Structure-Activity Relationships in IRAK4 Inhibitor Zimlovisertib (PF-06650833).
Acs Med.Chem.Lett., 15, 2024
8DVB
DownloadVisualize
BU of 8dvb by Molmil
Estrogen Receptor Alpha Ligand Binding Domain in Complex with (1'-(4-((1-butylpyrrolidin-3-yl)methoxy)phenyl)-6'-hydroxy-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl)(phenyl)methanone
分子名称: Estrogen receptor, [(1'R)-1'-(4-{[(3R)-1-(3-fluoropropyl)pyrrolidin-3-yl]methoxy}phenyl)-6'-hydroxy-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl](phenyl)methanone
著者Hancock, G.R, Young, K.S, Hosfield, D.J, Joiner, C, Sullivan, E.A, Yildz, Y, Laine, M, Greene, G.L, Fanning, S.W.
登録日2022-07-28
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Unconventional isoquinoline-based SERMs elicit fulvestrant-like transcriptional programs in ER+ breast cancer cells.
NPJ Breast Cancer, 8, 2022
8P36
DownloadVisualize
BU of 8p36 by Molmil
Neisseria meningitidis Type IV pilus SB-DATDH variant
分子名称: 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose, Neisseria meningitidis PilE, SB-DATDH variant, ...
著者Fernandez-Martinez, D, Dumenil, G.
登録日2023-05-17
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms.
Nat Commun, 15, 2024
7PBK
DownloadVisualize
BU of 7pbk by Molmil
Vibriophage phiVC8 family A DNA polymerase (DpoZ), two conformations: thumb-exo open and thumb-exo closed
分子名称: DNA polymerase I
著者Czernecki, D, Hu, H, Romoli, F, Delarue, M.
登録日2021-08-02
公開日2021-11-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural dynamics and determinants of 2-aminoadenine specificity in DNA polymerase DpoZ of vibriophage phi VC8.
Nucleic Acids Res., 49, 2021
5NRK
DownloadVisualize
BU of 5nrk by Molmil
Crystal structure of the sixth cohesin from Acetivibrio cellulolyticus' scaffoldin B in complex with Cel5 dockerin S15I, I16N mutant
分子名称: CALCIUM ION, DocCel5: Type I dockerin repeat domain from A. cellulolyticus family 5 endoglucanase WP_010249057 S15I, I16N mutant, ...
著者Bule, P, Najmudin, S, Fontes, C.M.G.A, Alves, V.D.
登録日2017-04-24
公開日2018-01-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure-function analyses generate novel specificities to assemble the components of multienzyme bacterial cellulosome complexes.
J. Biol. Chem., 293, 2018
8E9D
DownloadVisualize
BU of 8e9d by Molmil
Crystal structure of E. coli aspartate aminotransferase mutant AIFS bound to maleic acid at 100 K
分子名称: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C.
登録日2022-08-26
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.
Nat Commun, 14, 2023
8E9C
DownloadVisualize
BU of 8e9c by Molmil
Crystal structure of E. coli aspartate aminotransferase mutant AIFS in the ligand-free form at 100 K
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C.
登録日2022-08-26
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.
Nat Commun, 14, 2023
6B3P
DownloadVisualize
BU of 6b3p by Molmil
Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K in Complex with Maltoheptaose
分子名称: 1,2-ETHANEDIOL, Amy13K, FORMIC ACID, ...
著者Cockburn, D.W, Wawrzak, Z, Perez Medina, K, Koropatkin, N.M.
登録日2017-09-22
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Mol. Microbiol., 107, 2018
4WV3
DownloadVisualize
BU of 4wv3 by Molmil
Crystal structure of the anthranilate CoA ligase AuaEII in complex with anthranoyl-AMP
分子名称: 5'-O-[(S)-[(2-aminobenzoyl)oxy](hydroxy)phosphoryl]adenosine, Anthranilate-CoA ligase
著者Tsai, S.C, Muller, R, Jackson, D.R, Tu, S.S, Nguyen, M, Barajas, J.F, Pistorious, D, Krug, D.
登録日2014-11-04
公開日2015-11-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献Structural Insights into Anthranilate Priming during Type II Polyketide Biosynthesis.
Acs Chem.Biol., 11, 2016
8ORQ
DownloadVisualize
BU of 8orq by Molmil
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase open clamp conformation
分子名称: DNA-directed RNA polymerase subunit Rpo10, DNA-directed RNA polymerase subunit Rpo11, DNA-directed RNA polymerase subunit Rpo12, ...
著者Tarau, D.M, Reichelt, R, Heiss, F.B, Pilsl, M, Hausner, W, Engel, C, Grohmann, D.
登録日2023-04-17
公開日2024-04-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment.
Nucleic Acids Res., 52, 2024

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon