Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 276 件
7ZSB
DownloadVisualize
BU of 7zsb by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP, complex C
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
7ZSA
DownloadVisualize
BU of 7zsa by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP (complex B)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
7ZS9
DownloadVisualize
BU of 7zs9 by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
7ZWC
DownloadVisualize
BU of 7zwc by Molmil
Structure of SNAPc:TBP-TFIIA-TFIIB sub-complex bound to U5 snRNA promoter
分子名称: Non-template strand, TATA-box-binding protein, Template strand, ...
著者Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P.
登録日2022-05-19
公開日2022-11-30
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II.
Nat.Struct.Mol.Biol., 29, 2022
1Q1H
DownloadVisualize
BU of 1q1h by Molmil
An extended winged helix domain in general transcription factor E/IIE alpha
分子名称: Transcription Factor E
著者Meinhart, A, Blobel, J, Cramer, P.
登録日2003-07-21
公開日2003-12-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献An Extended Winged Helix Domain in General Transcription Factor E/IIE alpha
J.Biol.Chem., 278, 2003
8BVW
DownloadVisualize
BU of 8bvw by Molmil
RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
登録日2022-12-20
公開日2023-05-03
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
8B3I
DownloadVisualize
BU of 8b3i by Molmil
CRL4CSA-E2-Ub (state 2)
分子名称: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-8, ...
著者Kokic, G, Cramer, P.
登録日2022-09-16
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献C(N)RL4CSA-E2-Ub (state 2)
To Be Published
8B3G
DownloadVisualize
BU of 8b3g by Molmil
C(N)RL4CSA-UVSSA-E2-ubiquitin complex.
分子名称: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-8, ...
著者Kokic, G, Cramer, P.
登録日2022-09-16
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis for RNA polymerase II ubiquitylation and inactivation in transcription-coupled repair.
Nat.Struct.Mol.Biol., 31, 2024
8CEO
DownloadVisualize
BU of 8ceo by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleosome
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2023-02-02
公開日2023-03-08
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CEN
DownloadVisualize
BU of 8cen by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Schilbach, S, Cramer, P.
登録日2023-02-02
公開日2023-03-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BYQ
DownloadVisualize
BU of 8byq by Molmil
RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W)
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
登録日2022-12-14
公開日2023-05-03
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
5L3X
DownloadVisualize
BU of 5l3x by Molmil
Crystal structure of negative elongation factor subcomplex NELF-AC
分子名称: CHLORIDE ION, Negative elongation factor A, Negative elongation factor C/D
著者Poellmann, D, Vos, S.M, Cramer, P.
登録日2016-05-24
公開日2016-06-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Architecture and RNA binding of the human negative elongation factor.
Elife, 5, 2016
8BZ1
DownloadVisualize
BU of 8bz1 by Molmil
RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W)
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
登録日2022-12-14
公開日2023-05-03
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
2XNF
DownloadVisualize
BU of 2xnf by Molmil
The Mediator Med25 activator interaction domain: Structure and cooperative binding of VP16 subdomains
分子名称: MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
著者Vojnic, E, Mourao, A, Seizl, M, Simon, B, Wenzeck, L, Lariviere, L, Baumli, S, Meisterernst, M, Sattler, M, Cramer, P.
登録日2010-08-02
公開日2011-03-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Vp16 Binding of the Mediator Med25 Activator Interaction Domain.
Nat.Struct.Mol.Biol., 18, 2011
3FBI
DownloadVisualize
BU of 3fbi by Molmil
Structure of the Mediator submodule Med7N/31
分子名称: Mediator of RNA polymerase II transcription subunit 31, Mediator of RNA polymerase II transcription subunit 7
著者Koschubs, T, Seizl, M, Lariviere, L, Kurth, F, Baumli, S, Martin, D.E, Cramer, P.
登録日2008-11-19
公開日2008-12-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification, structure, and functional requirement of the Mediator submodule Med7N/31
Embo J., 28, 2009
3FBN
DownloadVisualize
BU of 3fbn by Molmil
Structure of the Mediator submodule Med7N/31
分子名称: Mediator of RNA polymerase II transcription subunit 31, Mediator of RNA polymerase II transcription subunit 7
著者Koschubs, T, Seizl, M, Lariviere, L, Kurth, F, Baumli, S, Martin, D.E, Cramer, P.
登録日2008-11-19
公開日2008-12-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.007 Å)
主引用文献Identification, structure, and functional requirement of the Mediator submodule Med7N/31
Embo J., 28, 2009
3LPE
DownloadVisualize
BU of 3lpe by Molmil
Crystal structure of Spt4/5NGN heterodimer complex from Methanococcus jannaschii
分子名称: DNA-directed RNA polymerase subunit E'', Putative transcription antitermination protein nusG, ZINC ION
著者Hirtreiter, A, Damsma, G.E, Cheung, A.C.M, Klose, D, Grohmann, D, Vojnic, E, Martin, A.C.R, Cramer, P, Werner, F.
登録日2010-02-05
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif.
Nucleic Acids Res., 38, 2010
3M1M
DownloadVisualize
BU of 3m1m by Molmil
Crystal structure of the primase-polymerase from Sulfolobus islandicus
分子名称: GLYCEROL, ORF904, SULFATE ION, ...
著者Vannini, A, Beck, K, Lipps, G, Cramer, P.
登録日2010-03-05
公開日2010-06-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The archaeo-eukaryotic primase of plasmid pRN1 requires a helix bundle domain for faithful primer synthesis
Nucleic Acids Res., 38, 2010
3NR5
DownloadVisualize
BU of 3nr5 by Molmil
Crystal structure of human Maf1
分子名称: Repressor of RNA polymerase III transcription MAF1 homolog
著者Ringel, R, Vannini, A, Kusser, A.G, Berninghausen, O, Kassavetis, G.A, Cramer, P.
登録日2010-06-30
公開日2010-10-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Molecular Basis of RNA Polymerase III Transcription Repression by Maf1
Cell(Cambridge,Mass.), 143, 2010
8RAN
DownloadVisualize
BU of 8ran by Molmil
Structure of Sen1-RNA complex
分子名称: Helicase SEN1, RNA
著者Rengachari, S, Lidscreiber, M, Cramer, P.
登録日2023-12-01
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Mechanism of polyadenylation-independent RNA polymerase II termination.
Nat.Struct.Mol.Biol., 2024
8RAO
DownloadVisualize
BU of 8rao by Molmil
Structure of Sen1-ADP.BeF3-RNA complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Helicase SEN1, ...
著者Rengachari, S, Lidscreiber, M, Cramer, P.
登録日2023-12-01
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Mechanism of polyadenylation-independent RNA polymerase II termination.
Nat.Struct.Mol.Biol., 2024
8RBZ
DownloadVisualize
BU of 8rbz by Molmil
Structure of Integrator-PP2A-SOSS-CTD post-termination complex
分子名称: DNA-directed RNA polymerase subunit, DSS1, Integrator complex subunit 1, ...
著者Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P.
登録日2023-12-05
公開日2024-02-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of Integrator-dependent RNA polymerase II termination.
Nature, 629, 2024
2RF4
DownloadVisualize
BU of 2rf4 by Molmil
Crystal structure of the RNA Polymerase I subcomplex A14/43
分子名称: DNA-directed RNA polymerase I subunit RPA4
著者Geiger, S.R, Kuhn, C.D, Cramer, P.
登録日2007-09-28
公開日2008-01-15
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Functional architecture of RNA polymerase I.
Cell(Cambridge,Mass.), 131, 2007
2R93
DownloadVisualize
BU of 2r93 by Molmil
Elongation complex of RNA polymerase II with a hepatitis delta virus-derived RNA stem loop
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Lehmann, E, Brueckner, F, Cramer, P.
登録日2007-09-12
公開日2007-11-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Molecular basis of RNA-dependent RNA polymerase II activity.
Nature, 450, 2007
8B3F
DownloadVisualize
BU of 8b3f by Molmil
Pol II-CSB-CSA-DDB1-ELOF1
分子名称: DNA damage-binding protein 1, DNA excision repair protein ERCC-6, DNA excision repair protein ERCC-8, ...
著者Kokic, G, Cramer, P.
登録日2022-09-16
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Pol II-CSB-CSA-DDB1-ELOF1 structure.
To Be Published

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon