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PDB: 48 results

7KVB
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BU of 7kvb by Molmil
Chimeric flavivirus between Binjari virus and Murray Valley encephalitis virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, Matrix protein M
Authors:Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
Deposit date:2020-11-27
Release date:2020-12-23
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses.
Nat Commun, 12, 2021
7KV9
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BU of 7kv9 by Molmil
Chimeric flavivirus between Binjari virus and West Nile (Kunjin) virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Matrix protein M, envelope protein E
Authors:Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
Deposit date:2020-11-27
Release date:2020-12-23
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses.
Nat Commun, 12, 2021
7L30
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BU of 7l30 by Molmil
Binjari virus (BinJV)
Descriptor: Envelope protein E, prM protein
Authors:Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
Deposit date:2020-12-17
Release date:2021-03-10
Last modified:2021-05-26
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The structure of an infectious immature flavivirus redefines viral architecture and maturation.
Sci Adv, 7, 2021
7KVA
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BU of 7kva by Molmil
Structure of West Nile virus (Kunjin)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, Matrix protein M
Authors:Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
Deposit date:2020-11-27
Release date:2020-12-23
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses.
Nat Commun, 12, 2021
7KV8
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BU of 7kv8 by Molmil
Chimeric flavivirus between Binjari virus and Dengue virus serotype-2
Descriptor: (2S,3R,4Z)-3-hydroxy-2-[(9E)-octadec-9-enoylamino]octadec-4-en-1-yl dihydrogen phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
Deposit date:2020-11-27
Release date:2020-12-23
Last modified:2021-11-24
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses.
Nat Commun, 12, 2021
6BEH
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BU of 6beh by Molmil
Crystal structure of VACV D13 in complex with Rifapentine
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, RIFAPENTINE, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BEB
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BU of 6beb by Molmil
Crystal structure of VACV D13 in complex with Rifamycin SV
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Scaffold protein D13, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BEF
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BU of 6bef by Molmil
Crystal structure of VACV D13 in complex with 3-formyl rifamycin SV
Descriptor: (2S,12Z,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-8-formyl-5,6,9,17,19-pentahydroxy-23-methoxy-2,4,12,16,18,20,22-heptam ethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-21-yl acetate, 1,2-ETHANEDIOL, FORMIC ACID, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BEE
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BU of 6bee by Molmil
Crystal structure of VACV D13 in complex with Rifaximin
Descriptor: (2S,16Z,18E,20S,21S,22R,23R,24R,25S,26R,27S,28E)-5,6,21,23-tetrahydroxy-27-methoxy-2,4,11,16,20,22,24,26-octamethyl-1,1 5-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)furo[2'',3'':7',8']naphtho[1',2':4,5]imidazo[1,2-a]pyridin-2 5-yl acetate, 1,2-ETHANEDIOL, FORMIC ACID, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BEI
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BU of 6bei by Molmil
Crystal structure of VACV D13 in its apo (unbound) form
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Scaffold protein D13
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BED
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BU of 6bed by Molmil
Crystal structure of VACV D13 in complex with Rifampicin
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, RIFAMPICIN, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BEC
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BU of 6bec by Molmil
Crystal structure of VACV D13 in complex with Rifabutin
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, RIFABUTIN, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BEG
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BU of 6beg by Molmil
Crystal structure of VACV D13 F486A mutant
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Scaffold protein D13
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YRB
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BU of 5yrb by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRA
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BU of 5yra by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRC
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BU of 5yrc by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YR9
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BU of 5yr9 by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YR1
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BU of 5yr1 by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRD
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BU of 5yrd by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
6O1Y
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BU of 6o1y by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomeric form with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA translocase coupling protein, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1W
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BU of 6o1w by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer orthorhombic crystal form
Descriptor: DNA translocase coupling protein, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1X
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BU of 6o1x by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer form with ATPgS
Descriptor: DNA translocase coupling protein, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1Z
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BU of 6o1z by Molmil
Structure of pCW3 conjugation coupling protein TcpA hexagonal crystal form
Descriptor: DNA translocase coupling protein
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
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