Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 210 results

4MW1
DownloadVisualize
BU of 4mw1 by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1444)
Descriptor: 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-09-24
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
2X63
DownloadVisualize
BU of 2x63 by Molmil
Crystal structure of the sialyltransferase CST-II N51A in complex with CMP
Descriptor: 1,2-ETHANEDIOL, ALPHA-2,3-/2,8-SIALYLTRANSFERASE, CYTIDINE-5'-MONOPHOSPHATE
Authors:Lee, H.J, Lairson, L.L, Rich, J.R, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2010-02-14
Release date:2011-02-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Kinetic Analysis of Substrate Binding to the Sialyltransferase Cst-II from Campylobacter Jejuni.
J.Biol.Chem., 286, 2011
2X62
DownloadVisualize
BU of 2x62 by Molmil
CRYSTAL STRUCTURE OF THE SIALYLTRANSFERASE CST-II Y81F IN COMPLEX WITH CMP
Descriptor: 1,2-ETHANEDIOL, ALPHA-2,3-/2,8-SIALYLTRANSFERASE, N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE
Authors:Lee, H.J, Lairson, L.L, Rich, J.R, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2010-02-14
Release date:2011-02-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Kinetic Analysis of Substrate Binding to the Sialyltransferase Cst-II from Campylobacter Jejuni.
J.Biol.Chem., 286, 2011
4RQG
DownloadVisualize
BU of 4rqg by Molmil
Crystal structure of Rhodostomin
Descriptor: Disintegrin rhodostomin
Authors:Shiu, J.H, Huang, C.H, Chang, Y.T, Jeng, W.Y, Chuang, W.J.
Deposit date:2014-11-03
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Effects of the regions adjacent to the RGD motif in disintegrins on their inhibitory activities and structures
To be Published
1J3S
DownloadVisualize
BU of 1j3s by Molmil
Solution Structure of Reduced Recombinant Human Cytochrome c
Descriptor: Cytochrome c, HEME C
Authors:Jeng, W.-Y, Shiu, J.-H, Tsai, Y.-H, Chuang, W.-J.
Deposit date:2003-02-12
Release date:2004-05-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of Reduced Recombinant Human Cytochrome c
To be Published
4R5R
DownloadVisualize
BU of 4r5r by Molmil
Crystal structure of Rhodostomin KKKRT mutant
Descriptor: Disintegrin rhodostomin
Authors:Huang, C.H, Shiu, J.H, Chang, Y.T, Jeng, W.Y, Chuang, W.J.
Deposit date:2014-08-21
Release date:2015-08-26
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Effects of the regions adjacent to the RGD motif in disintegrins on their inhibitory activities and structures
To be Published
4MW5
DownloadVisualize
BU of 4mw5 by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-phenylurea (Chem 1415)
Descriptor: 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-phenylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-09-24
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.347 Å)
Cite:Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
4MWD
DownloadVisualize
BU of 4mwd by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1433) and ATP analog AMPPCP
Descriptor: 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-09-24
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
7AX7
DownloadVisualize
BU of 7ax7 by Molmil
Crystal structure of the Xyl-CE4 domain of a multidomain xylanase from the hindgut metagenome of Trinervitermes trinervoides
Descriptor: ACETATE ION, COBALT (II) ION, Endo-1,4-beta-xylanase
Authors:Anye, V, Schubert, W.D.
Deposit date:2020-11-09
Release date:2020-11-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05000186 Å)
Cite:Structural and biophysical characterization of the multidomain xylanase Xyl.
Plos One, 17, 2022
6F7S
DownloadVisualize
BU of 6f7s by Molmil
Crystal structure of Human ARS2 residues 147-270 + 408-763 with deletion of loop B
Descriptor: Serrate RNA effector molecule homolog, Serrate RNA effector molecule homolog,Serrate RNA effector molecule homolog
Authors:Cusack, S, Schulze, W.M.
Deposit date:2017-12-11
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Structural analysis of human ARS2 as a platform for co-transcriptional RNA sorting.
Nat Commun, 9, 2018
4M4C
DownloadVisualize
BU of 4m4c by Molmil
Crystal structure of Rhodostomin ARGDP mutant
Descriptor: SULFATE ION, Zinc metalloproteinase/disintegrin
Authors:Chang, Y.T, Jeng, W.Y, Shiu, J.H, Chen, C.Y, Chuang, W.J.
Deposit date:2013-08-07
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of C-terminal proline residue adjacent to the RGD motif in rhodostomin on its activity and structure
To be Published
6F7P
DownloadVisualize
BU of 6f7p by Molmil
Crystal structure of Human ARS2 residues 147-270 + 408-763
Descriptor: Serrate RNA effector molecule homolog
Authors:Cusack, S, Schulze, W.M.
Deposit date:2017-12-11
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural analysis of human ARS2 as a platform for co-transcriptional RNA sorting.
Nat Commun, 9, 2018
2V3A
DownloadVisualize
BU of 2v3a by Molmil
Crystal structure of rubredoxin reductase from Pseudomonas aeruginosa.
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Hagelueken, G, Wiehlmann, L, Adams, T.M, Kolmar, H, Heinz, D.W, Tuemmler, B, Schubert, W.-D.
Deposit date:2007-06-14
Release date:2007-08-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Electron Transfer Complex Rubredoxin - Rubredoxin Reductase from Pseudomonas Aeruginosa.
Proc.Natl.Acad.Sci.USA, 104, 2007
2V3B
DownloadVisualize
BU of 2v3b by Molmil
Crystal structure of the electron transfer complex rubredoxin - rubredoxin reductase from Pseudomonas aeruginosa.
Descriptor: FE (III) ION, FLAVIN-ADENINE DINUCLEOTIDE, RUBREDOXIN 2, ...
Authors:Hagelueken, G, Wiehlmann, L, Adams, T.M, Kolmar, H, Heinz, D.W, Tuemmler, B, Schubert, W.-D.
Deposit date:2007-06-14
Release date:2007-08-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of the Electron Transfer Complex Rubredoxin - Rubredoxin Reductase from Pseudomonas Aeruginosa.
Proc.Natl.Acad.Sci.USA, 104, 2007
1OLT
DownloadVisualize
BU of 1olt by Molmil
Coproporphyrinogen III oxidase (HemN) from Escherichia coli is a Radical SAM enzyme.
Descriptor: IRON/SULFUR CLUSTER, OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE, S-ADENOSYLMETHIONINE
Authors:Layer, G, Moser, J, Heinz, D.W, Jahn, D, Schubert, W.-D.
Deposit date:2003-08-13
Release date:2003-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal Structure of Coproporphyrinogen III Oxidase Reveals Cofactor Geometry of Radical Sam Enzymes
Embo J., 22, 2003
4WLH
DownloadVisualize
BU of 4wlh by Molmil
High resolution crystal structure of human kynurenine aminotransferase-I bound to PLP cofactor
Descriptor: Kynurenine--oxoglutarate transaminase 1
Authors:Nadvi, N.A, Salam, N.K, Park, J, Akladios, F.N, Kapoor, V, Collyer, C.A, Gorrell, M.D, Church, W.B.
Deposit date:2014-10-07
Release date:2014-12-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High resolution crystal structures of human kynurenine aminotransferase-I bound to PLP cofactor, and in complex with aminooxyacetate.
Protein Sci., 26, 2017
2WNB
DownloadVisualize
BU of 2wnb by Molmil
Crystal Structure of a Mammalian Sialyltransferase in complex with disaccharide and CMP
Descriptor: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1, CYTIDINE-5'-MONOPHOSPHATE, HYDROXY(2-HYDROXYPHENYL)OXOAMMONIUM, ...
Authors:Rao, F.V, Rich, J.R, Raikic, B, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2009-07-08
Release date:2009-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Insight Into Mammalian Sialyltransferases.
Nat.Struct.Mol.Biol., 16, 2009
2WNF
DownloadVisualize
BU of 2wnf by Molmil
Crystal Structure of a Mammalian Sialyltransferase in complex with Gal-beta-1-3GalNAc-ortho-nitrophenol
Descriptor: CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE, HYDROXY(2-HYDROXYPHENYL)OXOAMMONIUM, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Rao, F.V, Rich, J.R, Raikic, B, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2009-07-09
Release date:2009-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Insight Into Mammalian Sialyltransferases.
Nat.Struct.Mol.Biol., 16, 2009
2WML
DownloadVisualize
BU of 2wml by Molmil
Crystal Structure of a Mammalian Sialyltransferase
Descriptor: CHLORIDE ION, CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE -ALPHA-2,3-SIALYLTRANSFERASE, GLYCEROL
Authors:Rao, F.V, Rich, J.R, Raikic, B, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2009-07-01
Release date:2009-10-13
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insight Into Mammalian Sialyltransferases.
Nat.Struct.Mol.Biol., 16, 2009
2XDQ
DownloadVisualize
BU of 2xdq by Molmil
Dark Operative Protochlorophyllide Oxidoreductase (ChlN-ChlB)2 Complex
Descriptor: 1-METHYLGUANIDINE, IRON/SULFUR CLUSTER, LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B, ...
Authors:Broecker, M.J, Schomburg, S, Heinz, D.W, Jahn, D, Schubert, W.-D, Moser, J.
Deposit date:2010-05-06
Release date:2010-06-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Nitrogenase-Like Dark Operative Protochlorophyllide Oxidoreductase Catalytic Complex (Chln/Chlb)2.
J.Biol.Chem., 285, 2010
4CC7
DownloadVisualize
BU of 4cc7 by Molmil
Crystal structure of the sixth or C-terminal SH3 domain of human Tuba in complex with proline-rich peptides of N-WASP. Space group P41
Descriptor: CHLORIDE ION, DYNAMIN-BINDING PROTEIN, GLYCEROL, ...
Authors:Polle, L, Rigano, L, Julian, R, Ireton, K, Schubert, W.-D.
Deposit date:2013-10-18
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Details of Human Tuba Recruitment by Inlc of Listeria Monocytogenes Elucidate Bacterial Cell-Cell Spreading.
Structure, 22, 2014
4CC4
DownloadVisualize
BU of 4cc4 by Molmil
Complex of InlC of Listeria monocytogenes and human Tuba C-terminal SH3 domain
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, DYNAMIN-BINDING PROTEIN, ...
Authors:Polle, L, Rigano, L, Julian, R, Ireton, K, Schubert, W.-D.
Deposit date:2013-10-17
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Details of Human Tuba Recruitment by Inlc of Listeria Monocytogenes Elucidate Bacterial Cell-Cell Spreading.
Structure, 22, 2014
3U8B
DownloadVisualize
BU of 3u8b by Molmil
Functionally selective inhibition of Group IIA phospholipase A2 reveals a role for vimentin in regulating arachidonic acid metabolism
Descriptor: CALCIUM ION, CHLORIDE ION, Phospholipase A2, ...
Authors:Lee, L.K, Bryant, K.J, Bouveret, R, Lei, P.-W, Duff, A.P, Harrop, S.J, Huang, E.P, Harvey, R.P, Gelb, M.H, Gray, P.P, Curmi, P.M, Cunningham, A.M, Church, W.B, Scott, K.F.
Deposit date:2011-10-16
Release date:2012-10-17
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes.
J.Biol.Chem., 288, 2013
6LSQ
DownloadVisualize
BU of 6lsq by Molmil
Crystal structure of Echistatin, an RGD-containing short disintegrin
Descriptor: Disintegrin, SULFATE ION
Authors:Chang, Y.T, Chen, Y.C, Chuang, W.J.
Deposit date:2020-01-19
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insight into Integrin Recognition and Anticancer Activity of Echistatin.
Toxins, 12, 2020
7AYP
DownloadVisualize
BU of 7ayp by Molmil
Structure of a GH11 domain refined from the X-ray diffraction data of a GH11-CBM36-1 crystal.
Descriptor: Endo-1,4-beta-xylanase
Authors:Anye, V, Schubert, W.D.
Deposit date:2020-11-12
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.70001292 Å)
Cite:Structural and biophysical characterization of the multidomain xylanase Xyl.
Plos One, 17, 2022

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon