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PDB: 26 件
2KO3
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Nedd8 solution structure
分子名称: NEDD8
著者Choi, Y.S, Jeon, Y.H, Cheong, C.
登録日2009-09-09
公開日2009-11-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献60th residues of ubiquitin and Nedd8 are located out of E2-binding surfaces, but are important for K48 ubiquitin-linkage.
Febs Lett., 583, 2009
7VOV
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BU of 7vov by Molmil
The crystal structure of human forkhead box protein in complex with DNA 2
分子名称: DNA (5'-D(P*AP*AP*AP*TP*AP*TP*TP*TP*AP*TP*TP*AP*TP*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*AP*TP*AP*AP*TP*AP*AP*AP*TP*AP*TP*T)-3'), Forkhead box protein L2
著者Choi, Y, Yoon, H.J, Lee, H.H.
登録日2021-10-15
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献FOXL2 and FOXA1 cooperatively assemble on the TP53 promoter in alternative dimer configurations.
Nucleic Acids Res., 50, 2022
7VOX
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BU of 7vox by Molmil
The crystal structure of human forkhead box protein A in complex with DNA 2
分子名称: DNA (5'-D(P*AP*AP*AP*TP*AP*TP*TP*TP*AP*TP*TP*AP*TP*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*AP*TP*AP*AP*TP*AP*AP*AP*TP*AP*TP*TP*T)-3'), Hepatocyte nuclear factor 3-alpha, ...
著者Choi, Y, Yoon, H.J, Lee, H.H.
登録日2021-10-15
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献FOXL2 and FOXA1 cooperatively assemble on the TP53 promoter in alternative dimer configurations.
Nucleic Acids Res., 50, 2022
7VOU
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The crystal structure of human forkhead box protein in complex with DNA 1
分子名称: DNA (5'-D(*AP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3'), DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*T)-3'), Forkhead box protein L2
著者Choi, Y, Yoon, H.J, Lee, H.H.
登録日2021-10-14
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献FOXL2 and FOXA1 cooperatively assemble on the TP53 promoter in alternative dimer configurations.
Nucleic Acids Res., 50, 2022
5JPO
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BU of 5jpo by Molmil
Complex structure of human elongation factor 1B gamma GST-liked domain and delta N-terminal domain
分子名称: Elongation factor 1-delta, Elongation factor 1-gamma, GLYCEROL
著者Choi, Y.S, Kang, B.S.
登録日2016-05-04
公開日2017-05-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Complex structure of human elongation factor 1B gamma GST-liked domain and delta N-terminal domain
To Be Published
5Z2W
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BU of 5z2w by Molmil
Crystal structure of the bacterial cell division protein FtsQ and FtsB
分子名称: Cell division protein FtsB, Cell division protein FtsQ, MAGNESIUM ION
著者Choi, Y, Yoon, H.J, Lee, H.H.
登録日2018-01-04
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Insights into the FtsQ/FtsB/FtsL Complex, a Key Component of the Divisome.
Sci Rep, 8, 2018
5DQS
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Complex structure of human elongation factor 1B alpha and gamma GST-like domains
分子名称: Elongation factor 1-beta, Elongation factor 1-gamma
著者Choi, Y.S, Cho, H.Y, Kang, B.S.
登録日2015-09-15
公開日2016-09-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Complex structure of human elongation factor 1B alpha and gamma GST-like domains
To be published
7E69
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BU of 7e69 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-3
分子名称: N-oxidanyl-4-[(4-sulfamoylphenyl)methyl]benzamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E65
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 3
分子名称: (2S)-2-acetamido-N-[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]-3-(4-sulfamoylphenyl)propanamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E64
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
分子名称: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E67
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
分子名称: N-oxidanyl-2-[4-(4-sulfamoylphenyl)phenyl]ethanamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E63
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BU of 7e63 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
分子名称: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(cyclopentylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E66
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BU of 7e66 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-1
分子名称: N-[2-(oxidanylamino)-2-oxidanylidene-ethyl]-2-(4-sulfamoylphenyl)ethanamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
2RVC
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BU of 2rvc by Molmil
Solution structure of Zalpha domain of goldfish ZBP-containing protein kinase
分子名称: Interferon-inducible and double-stranded-dependent eIF-2kinase
著者Lee, A, Park, C, Park, J, Kwon, M, Choi, Y, Kim, K, Choi, B, Lee, J.
登録日2015-07-08
公開日2016-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the Z-DNA binding domain of PKR-like protein kinase from Carassius auratus and quantitative analyses of the intermediate complex during B-Z transition.
Nucleic Acids Res., 44, 2016
8HST
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BU of 8hst by Molmil
The structure of rat beta-arrestin1
分子名称: Beta-arrestin-1
著者Yun, Y, Yoon, H.J, Choi, Y, Lee, H.H.
登録日2022-12-20
公開日2023-07-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献GPCR targeting of E3 ubiquitin ligase MDM2 by inactive beta-arrestin.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HSV
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BU of 8hsv by Molmil
The structure of rat beta-arrestin1 in complex with a rat Mdm2 peptide
分子名称: Beta-arrestin-1, SULFATE ION, peptide from E3 ubiquitin-protein ligase Mdm2
著者Yun, Y, Yoon, H.J, Choi, Y, Lee, H.H.
登録日2022-12-20
公開日2023-07-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献GPCR targeting of E3 ubiquitin ligase MDM2 by inactive beta-arrestin.
Proc.Natl.Acad.Sci.USA, 120, 2023
1YUC
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BU of 1yuc by Molmil
Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, Bound to Phospholipid and a Fragment of Human SHP
分子名称: GLYCEROL, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, Nuclear receptor 0B2, ...
著者Ortlund, E.A, Yoonkwang, L, Solomon, I.H, Hager, J.M, Safi, R, Choi, Y, Guan, Z, Tripathy, A, Raetz, C.R.H, McDonnell, D.P, Moore, D.D, Redinbo, M.R.
登録日2005-02-13
公開日2005-03-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Modulation of human nuclear receptor LRH-1 activity by phospholipids and SHP
Nat.Struct.Mol.Biol., 12, 2005
5A1N
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BU of 5a1n by Molmil
The crystal structure of the GST-like domains complex of EPRS-AIMP2 mutant S156D
分子名称: AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 2, BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE, GLYCEROL
著者Cho, H.Y, Choi, Y.S, Kang, B.S.
登録日2015-05-03
公開日2016-06-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Symmetric Assembly of a Decameric Subcomplex in Human Multi-tRNA Synthetase Complex Via Interactions between Glutathione Transferase-Homology Domains and Aspartyl-tRNA Synthetase.
J.Mol.Biol., 2019
1LB6
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TRAF6-CD40 Complex
分子名称: CD40 antigen, TNF receptor-associated factor 6
著者Ye, H, Arron, J.R, Lamothe, B, Cirilli, M, Kobayashi, T, Shevde, N.K, Segal, D, Dzivenu, O, Vologodskaia, M, Yim, M, Du, K, Singh, S, Pike, J.W, Darnay, B.G, Choi, Y, Wu, H.
登録日2002-04-02
公開日2002-07-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Distinct molecular mechanism for initiating TRAF6 signalling.
Nature, 418, 2002
1LB4
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BU of 1lb4 by Molmil
TRAF6 apo structure
分子名称: TNF receptor-associated factor 6
著者Ye, H, Arron, J.R, Lamothe, B, Cirilli, M, Kobayashi, T, Shevde, N.K, Segal, D, Dzivenu, O, Vologodskaia, M, Yim, M, Du, K, Singh, S, Pike, J.W, Darnay, B.G, Choi, Y, Wu, H.
登録日2002-04-02
公開日2002-07-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinct molecular mechanism for initiating TRAF6 signalling.
Nature, 418, 2002
1LB5
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BU of 1lb5 by Molmil
TRAF6-RANK Complex
分子名称: TNF receptor-associated factor 6, receptor activator of nuclear factor-kappa B
著者Ye, H, Arron, J.R, Lamothe, B, Cirilli, M, Kobayashi, T, Shevde, N.K, Segal, D, Dzivenu, O, Vologodskaia, M, Yim, M, Du, K, Singh, S, Pike, J.W, Darnay, B.G, Choi, Y, Wu, H.
登録日2002-04-02
公開日2002-07-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinct molecular mechanism for initiating TRAF6 signalling.
Nature, 418, 2002
6JJL
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BU of 6jjl by Molmil
Crystal structure of the DegP dodecamer with a modulator
分子名称: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP
著者Cho, H, Choi, Y, Lee, H.H, Kim, S.
登録日2019-02-26
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy.
Commun Biol, 3, 2020
6JJK
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Crystal structure of the DegP dodecamer with a modulator
分子名称: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP
著者Cho, H, Choi, Y, Lee, H.H, Kim, S.
登録日2019-02-26
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
6JJO
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Crystal structure of the DegP dodecamer with a modulator
分子名称: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator
著者Cho, H, Choi, Y, Lee, H.H, Kim, S.
登録日2019-02-26
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.157 Å)
主引用文献Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
7E60
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 1
分子名称: (2~{R},6~{S})-2,6-diacetamido-7-[[(2~{R})-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-7-oxidanylidene-heptanoic acid, Peptidase M23, ZINC ION
著者Min, K, Yoon, H.J, Choi, Y, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022

 

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