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PDB: 772 results

6LFS
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BU of 6lfs by Molmil
Poa1p H23A mutant in complex with ADP-ribose
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ADENOSINE-5-DIPHOSPHORIBOSE, ADP-ribose 1''-phosphate phosphatase
Authors:Chiu, Y.C, Hsu, C.H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Expanding the Substrate Specificity of Macro Domains toward 3''-Isomer of O-Acetyl-ADP-ribose
Acs Catalysis, 11, 2021
3VSN
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BU of 3vsn by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
Descriptor: GLYCEROL, IODIDE ION, Occlusion-derived virus envelope protein E66
Authors:Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
Deposit date:2012-04-27
Release date:2013-05-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
1WIV
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BU of 1wiv by Molmil
solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
Descriptor: ubiquitin-specific protease 14
Authors:Higuchi, Y, Abe, T, Hirota, H, Izumi, K, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
To be Published
1WMX
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BU of 1wmx by Molmil
Crystal Structure of Family 30 Carbohydrate Binding Module
Descriptor: COG3291: FOG: PKD repeat, SULFATE ION
Authors:Horiguchi, Y, Kono, M, Suzuki, A, Yamane, T, Arai, M, Sakka, K, Omiya, K.
Deposit date:2004-07-21
Release date:2004-08-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Family 30 Carbohydrate Binding Module
To be Published
1WZX
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BU of 1wzx by Molmil
Crystal Structure of Family 30 Carbohydrate Binding Module.
Descriptor: COG3291: FOG: PKD repeat
Authors:Horiguchi, Y, Kono, M, Suzuki, A, Yamane, T, Arai, M, Sakka, K, Omiya, K.
Deposit date:2005-03-10
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Crystal Structure of Family 30 Carbohydrate Binding Module
To be Published
2ZJ9
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BU of 2zj9 by Molmil
X-ray crystal structure of AmpC beta-Lactamase (AmpC(D)) from an Escherichia coli with a Tripeptide Deletion (Gly286 Ser287 Asp288) on the H10 Helix
Descriptor: AmpC, ISOPROPYL ALCOHOL, SODIUM ION
Authors:Yamaguchi, Y, Sato, G, Yamagata, Y, Wachino, J, Arakawa, Y, Kurosaki, H.
Deposit date:2008-02-29
Release date:2009-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of AmpC beta-lactamase (AmpCD) from an Escherichia coli clinical isolate with a tripeptide deletion (Gly286-Ser287-Asp288) in the H10 helix
Acta Crystallogr.,Sect.F, 65, 2009
2CWU
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BU of 2cwu by Molmil
Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWV
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BU of 2cwv by Molmil
Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWT
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BU of 2cwt by Molmil
Catalytic base deletion in copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
7DTM
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BU of 7dtm by Molmil
Crystal structure of metallo-beta-lactamase IMP-1 in complex with citrate.
Descriptor: CITRATE ANION, Metallo-beta-lactamase type 2, ZINC ION
Authors:Yamaguchi, Y, Kurosaki, H.
Deposit date:2021-01-06
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Metallo-beta-Lactamase (IMP-1) and Its D120E Mutant in Complexes with Citrate and the Inhibitory Effect of the Benzyl Group in Citrate Monobenzyl Ester.
J.Med.Chem., 64, 2021
7DTN
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BU of 7dtn by Molmil
Crystal structure of metallo-beta-lactamase IMP-1 mutant (D120E) in complex with citrate.
Descriptor: 2-(2-ETHOXYETHOXY)ETHANOL, CITRATE ANION, Metallo-beta-lactamase type 2, ...
Authors:Yamaguchi, Y, Kurosaki, H.
Deposit date:2021-01-06
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of Metallo-beta-Lactamase (IMP-1) and Its D120E Mutant in Complexes with Citrate and the Inhibitory Effect of the Benzyl Group in Citrate Monobenzyl Ester.
J.Med.Chem., 64, 2021
3VXD
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BU of 3vxd by Molmil
Crystal structure of unsaturated glucuronyl hydrolase mutant D115N from Streptcoccus agalactiae
Descriptor: Putative uncharacterized protein gbs1889, SULFATE ION
Authors:Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2012-09-11
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of unsaturated glucuronyl hydrolase mutant D115N from Streptcoccus agalactiae
To be Published
7F2W
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BU of 7f2w by Molmil
TbUox in complex with uric acid
Descriptor: URIC ACID, Uricase
Authors:Chiu, Y.C, Hsu, T.S, Huang, C.Y, Hsu, C.H.
Deposit date:2021-06-14
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural and biochemical insights into a hyperthermostable urate oxidase from Thermobispora bispora for hyperuricemia and gout therapy.
Int.J.Biol.Macromol., 188, 2021
7EG2
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BU of 7eg2 by Molmil
Crystal structure of the apoAequorin complex with (S)-daCTZ
Descriptor: (2~{S})-2-(hydroxymethyl)-6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-4-(phenylmethyl)-3~{H}-inden-1-one, Aequorin-2
Authors:Tomabechi, Y, Shirouzu, M.
Deposit date:2021-03-24
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Chiral deaza-coelenterazine analogs for probing a substrate-binding site in the Ca2+-binding photoprotein aequorin.
Plos One, 16, 2021
7EG3
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BU of 7eg3 by Molmil
Crystal structure of the apoAequorin complex with (S)-HM-daCTZ
Descriptor: (2~{S})-6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-4-(phenylmethyl)-2,3-dihydroinden-1-one, Aequorin-2
Authors:Tomabechi, Y, Shirouzu, M.
Deposit date:2021-03-24
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Chiral deaza-coelenterazine analogs for probing a substrate-binding site in the Ca2+-binding photoprotein aequorin.
Plos One, 16, 2021
7E9S
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BU of 7e9s by Molmil
Archaeal oligosaccharyltransferase AglB from Archaeoglobus fulgidus in complex with an inhibitory peptide and a dolichol-phosphate
Descriptor: (2R)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE, DI(HYDROXYETHYL)ETHER, Dolichyl-phosphooligosaccharide-protein glycotransferase 3, ...
Authors:Taguchi, Y, Hirata, K, Kohda, D.
Deposit date:2021-03-05
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of an archaeal oligosaccharyltransferase provides insight into the strict exclusion of proline from the N-glycosylation sequon.
Commun Biol, 4, 2021
3WUX
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BU of 3wux by Molmil
Crystal structure of unsaturated glucuronyl hydrolase mutant D115N/K370S from Streptococcus agalactiae
Descriptor: 1,2-ETHANEDIOL, Unsaturated chondroitin disaccharide hydrolase
Authors:Nakamichi, Y, Oiki, S, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2014-05-08
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Crystal structure of unsaturated glucuronyl hydrolase mutant D115N/K370S from Streptococcus agalactiae
to be published
3WIW
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BU of 3wiw by Molmil
Crystal structure of unsaturated glucuronyl hydrolase specific for heparin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glycosyl hydrolase family 88
Authors:Nakamichi, Y, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2013-09-26
Release date:2014-01-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a bacterial unsaturated glucuronyl hydrolase with specificity for heparin.
J.Biol.Chem., 289, 2014
3WVX
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BU of 3wvx by Molmil
Structure of D48A hen egg white lysozyme
Descriptor: Lysozyme C
Authors:Kawaguchi, Y, Yoneda, K, Araki, T.
Deposit date:2014-06-10
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The role of Asp48 in the hydrogen bonding network involving Asp52 of hen egg white lysozyme
TO BE PUBLISHED
3WVY
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BU of 3wvy by Molmil
Structure of D48A hen egg white lysozyme in complex with (GlcNAc)4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C
Authors:Kawaguchi, Y, Yoneda, K, Araki, T.
Deposit date:2014-06-11
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The role of Asp48 in the hydrogen bonding network involving Asp52 of hen egg white lysozyme
TO BE PUBLISHED
7F2V
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BU of 7f2v by Molmil
Urate oxidase from Thermobispora bispora in apo form
Descriptor: DIMETHYL SULFOXIDE, SULFATE ION, Uricase
Authors:Chiu, Y.C, Hsu, T.S, Huang, C.Y, Hsu, C.H.
Deposit date:2021-06-14
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and biochemical insights into a hyperthermostable urate oxidase from Thermobispora bispora for hyperuricemia and gout therapy.
Int.J.Biol.Macromol., 188, 2021
3WYH
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BU of 3wyh by Molmil
Structure of disulfide bond deletion mutant of ostrich egg white lysozyme
Descriptor: HEXAETHYLENE GLYCOL, Lysozyme g, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Kawaguchi, Y, Yoneda, K, Araki, T.
Deposit date:2014-08-28
Release date:2014-10-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure of disulfide bond deletion mutant of ostrich egg white lysozyme
To be Published
2YXW
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BU of 2yxw by Molmil
The deletion mutant of Multicopper Oxidase CueO
Descriptor: Blue copper oxidase cueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-04-27
Release date:2008-01-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site
J.Mol.Biol., 373, 2007
7E9X
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BU of 7e9x by Molmil
Trehalase of Arabidopsis thaliana acid mutant -D380A
Descriptor: GLYCEROL, Trehalase
Authors:Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
Deposit date:2021-03-05
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
3ANI
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BU of 3ani by Molmil
Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae
Descriptor: Putative uncharacterized protein gbs1889
Authors:Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-09-02
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011

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數據於2024-07-17公開中

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