4D2Q
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![BU of 4d2q by Molmil](/molmil-images/mine/4d2q) | Negative-stain electron microscopy of E. coli ClpB mutant E432A (BAP form bound to ClpP) | Descriptor: | CLPB | Authors: | Carroni, M, Kummer, E, Oguchi, Y, Clare, D.K, Wendler, P, Sinning, I, Kopp, J, Mogk, A, Bukau, B, Saibil, H.R. | Deposit date: | 2014-05-12 | Release date: | 2014-06-04 | Last modified: | 2017-08-23 | Method: | ELECTRON MICROSCOPY (18 Å) | Cite: | Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Activity and Cooperation with Hsp70 in Protein Disaggregation. Elife, 3, 2014
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3UX0
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![BU of 3ux0 by Molmil](/molmil-images/mine/3ux0) | Crystal structure of human 14-3-3 sigma in complex with TASK-3 peptide and stabilizer Fusicoccin H | Descriptor: | (4R,5R,6R,6aS,9S,9aE,10aR)-5-hydroxy-9-(hydroxymethyl)-6,10a-dimethyl-3-(propan-2-yl)-1,2,4,5,6,6a,7,8,9,10a-decahydrodicyclopenta[a,d][8]annulen-4-yl alpha-D-gulopyranoside, 14-3-3 protein sigma, CHLORIDE ION, ... | Authors: | Thiel, P, Bartel, M, Anders, C, Higuchi, Y, Schumacher, B, Kato, N, Ottmann, C. | Deposit date: | 2011-12-03 | Release date: | 2013-01-02 | Last modified: | 2013-05-01 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | A semisynthetic fusicoccane stabilizes a protein-protein interaction and enhances the expression of k(+) channels at the cell surface. Chem.Biol., 20, 2013
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2ZRQ
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![BU of 2zrq by Molmil](/molmil-images/mine/2zrq) | Crystal structure of S324A-subtilisin | Descriptor: | CALCIUM ION, Tk-subtilisin | Authors: | Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2008-08-28 | Release date: | 2009-03-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.16 Å) | Cite: | Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding Febs Lett., 582, 2008
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5B7M
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![BU of 5b7m by Molmil](/molmil-images/mine/5b7m) | Structure of perdeuterated CueO - the signal peptide was truncated by HRV3C protease | Descriptor: | Blue copper oxidase CueO, COPPER (II) ION | Authors: | Akter, M, Higuchi, Y, Shibata, N. | Deposit date: | 2016-06-07 | Release date: | 2016-10-19 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography Acta Crystallogr.,Sect.F, 72, 2016
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5AZX
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![BU of 5azx by Molmil](/molmil-images/mine/5azx) | Crystal structure of p24delta1 GOLD domain (native 1) | Descriptor: | SULFATE ION, Transmembrane emp24 domain-containing protein 10 | Authors: | Nagae, M, Yamaguchi, Y. | Deposit date: | 2015-10-23 | Release date: | 2016-09-14 | Last modified: | 2020-02-26 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | 3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport J.Mol.Biol., 428, 2016
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3UAE
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![BU of 3uae by Molmil](/molmil-images/mine/3uae) | Multicopper Oxidase CueO mutant C500SE506Q (data6) | Descriptor: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | Authors: | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | Deposit date: | 2011-10-21 | Release date: | 2012-04-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions. Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAB
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![BU of 3uab by Molmil](/molmil-images/mine/3uab) | Multicopper Oxidase CueO mutant C500SE506Q (data2) | Descriptor: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | Authors: | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | Deposit date: | 2011-10-21 | Release date: | 2012-04-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions. Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAD
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![BU of 3uad by Molmil](/molmil-images/mine/3uad) | Multicopper Oxidase CueO mutant C500SE506Q (data5) | Descriptor: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | Authors: | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | Deposit date: | 2011-10-21 | Release date: | 2012-04-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions. Angew.Chem.Int.Ed.Engl., 51, 2012
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4D2X
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![BU of 4d2x by Molmil](/molmil-images/mine/4d2x) | Negative-stain electron microscopy of E. coli ClpB of Y503D hyperactive mutant (BAP form bound to ClpP) | Descriptor: | CHAPERONE PROTEIN CLPB | Authors: | Carroni, M, Kummer, E, Oguchi, Y, Clare, D.K, Wendler, P, Sinning, I, Kopp, J, Mogk, A, Bukau, B, Saibil, H.R. | Deposit date: | 2014-05-13 | Release date: | 2014-06-04 | Last modified: | 2019-01-23 | Method: | ELECTRON MICROSCOPY (20 Å) | Cite: | Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Activity and Cooperation with Hsp70 in Protein Disaggregation. Elife, 3, 2014
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2Z1T
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![BU of 2z1t by Molmil](/molmil-images/mine/2z1t) | |
3A20
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![BU of 3a20 by Molmil](/molmil-images/mine/3a20) | |
5B7F
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![BU of 5b7f by Molmil](/molmil-images/mine/5b7f) | Structure of CueO - the signal peptide was truncated by HRV3C protease | Descriptor: | 1,2-ETHANEDIOL, Blue copper oxidase CueO, CALCIUM ION, ... | Authors: | Akter, M, Higuchi, Y, Shibata, N. | Deposit date: | 2016-06-07 | Release date: | 2016-10-19 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography Acta Crystallogr.,Sect.F, 72, 2016
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2ZZU
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![BU of 2zzu by Molmil](/molmil-images/mine/2zzu) | Human Factor VIIA-Tissue Factor Complexed with ethylsulfonamide-D-5-(3-carboxybenzyloxy)-Trp-Gln-p-aminobenzamidine | Descriptor: | 3-[[3-[(2R)-3-[[(2S)-5-amino-1-[(4-carbamimidoylphenyl)methylamino]-1,5-dioxo-pentan-2-yl]amino]-2-(ethylsulfonylamino)-3-oxo-propyl]-1H-indol-5-yl]oxymethyl]benzoic acid, CALCIUM ION, Factor VII heavy chain, ... | Authors: | Kadono, S, Sakamoto, A, Kikuchi, Y, Oh-Eda, M, Yabuta, N, Koga, T, Hattori, K, Shiraishi, T, Haramura, M, Sato, H, Ohta, M, Kozono, T. | Deposit date: | 2009-02-25 | Release date: | 2009-03-24 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Design and synthesis of peptidomimetic factor VIIa inhibitors Chem.Pharm.Bull., 58, 2010
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3WC8
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![BU of 3wc8 by Molmil](/molmil-images/mine/3wc8) | Dimeric horse cytochrome c obtained by refolding with desalting method | Descriptor: | Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ... | Authors: | Parui, P.P, Deshpande, M.S, Nagao, S, Kamikubo, H, Komori, H, Higuchi, Y, Kataoka, M, Hirota, S. | Deposit date: | 2013-05-25 | Release date: | 2013-12-11 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Formation of Oligomeric Cytochrome c during Folding by Intermolecular Hydrophobic Interaction between N- and C-Terminal alpha-Helices Biochemistry, 52, 2013
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2D07
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![BU of 2d07 by Molmil](/molmil-images/mine/2d07) | Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase | Descriptor: | G/T mismatch-specific thymine DNA glycosylase, Ubiquitin-like protein SMT3B | Authors: | Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M. | Deposit date: | 2005-07-26 | Release date: | 2006-06-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase J.Mol.Biol., 359, 2006
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3UAC
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![BU of 3uac by Molmil](/molmil-images/mine/3uac) | Multicopper Oxidase CueO mutant C500SE506Q (data4) | Descriptor: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | Authors: | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | Deposit date: | 2011-10-21 | Release date: | 2012-04-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions. Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAA
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![BU of 3uaa by Molmil](/molmil-images/mine/3uaa) | Multicopper Oxidase CueO mutant C500SE506Q (data1) | Descriptor: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | Authors: | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | Deposit date: | 2011-10-21 | Release date: | 2012-04-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions. Angew.Chem.Int.Ed.Engl., 51, 2012
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3WUI
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![BU of 3wui by Molmil](/molmil-images/mine/3wui) | Dimeric horse cytochrome c formed by refolding from molten globule state | Descriptor: | Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ... | Authors: | Deshpande, M.S, Parui, P.P, Kamikubo, H, Yamanaka, M, Nagao, S, Komori, H, Kataoka, M, Higuchi, Y, Hirota, S. | Deposit date: | 2014-04-25 | Release date: | 2014-07-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Formation of domain-swapped oligomer of cytochrome C from its molten globule state oligomer. Biochemistry, 53, 2014
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3WY8
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![BU of 3wy8 by Molmil](/molmil-images/mine/3wy8) | Crystal Structure of Protease Anisep from Arthrobacter Nicotinovorans | Descriptor: | Serine protease | Authors: | Sone, T, Haraguchi, Y, Kuwahara, A, Ose, T, Takano, M, Abe, A, Tanaka, M, Tanaka, I, Asano, K. | Deposit date: | 2014-08-20 | Release date: | 2015-08-26 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural characterization reveals the keratinolytic activity of an arthrobacter nicotinovorans protease. Protein Pept.Lett., 22, 2015
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3WZ3
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![BU of 3wz3 by Molmil](/molmil-images/mine/3wz3) | Structure of a periplasmic fragment of TraM | Descriptor: | SULFATE ION, TraM protein | Authors: | Kuroda, T, Kubori, T, Uchida, Y, Nagai, H, Imada, K. | Deposit date: | 2014-09-18 | Release date: | 2015-06-10 | Last modified: | 2016-06-29 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Molecular and structural analysis of Legionella DotI gives insights into an inner membrane complex essential for type IV secretion Sci Rep, 5, 2015
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3X15
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![BU of 3x15 by Molmil](/molmil-images/mine/3x15) | Dimeric Aquifex aeolicus cytochrome c555 | Descriptor: | Cytochrome c552, HEME C | Authors: | Yamanaka, M, Nagao, S, Komori, H, Higuchi, Y, Hirota, S. | Deposit date: | 2014-10-29 | Release date: | 2015-01-28 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Change in structure and ligand binding properties of hyperstable cytochrome c555 from Aquifex aeolicus by domain swapping Protein Sci., 24, 2015
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3WZ5
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![BU of 3wz5 by Molmil](/molmil-images/mine/3wz5) | Structure of the periplasmic domain of DotI (crystal form II) | Descriptor: | DotI | Authors: | Kuroda, T, Kubori, T, Uchida, Y, Nagai, H, Imada, K. | Deposit date: | 2014-09-18 | Release date: | 2015-06-10 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Molecular and structural analysis of Legionella DotI gives insights into an inner membrane complex essential for type IV secretion Sci Rep, 5, 2015
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2YYS
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![BU of 2yys by Molmil](/molmil-images/mine/2yys) | Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8 | Descriptor: | GLYCEROL, Proline iminopeptidase-related protein | Authors: | Okai, M, Miyauchi, Y, Ebihara, A, Lee, W.C, Nagata, K, Tanokura, M. | Deposit date: | 2007-05-01 | Release date: | 2008-02-26 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8 Proteins, 70, 2008
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2Z2M
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![BU of 2z2m by Molmil](/molmil-images/mine/2z2m) | Cefditoren-Acylated Penicillin-Binding Protein 2X (PBP2X) from Streptococcus pneumoniae | Descriptor: | (2R)-2-[(1R)-1-{[(2Z)-2-(2-AMINO-1,3-THIAZOL-4-YL)-2-(METHOXYIMINO)ACETYL]AMINO}-2-OXOETHYL]-5-[(Z)-2-(4-METHYL-1,3-THIAZOL-5-YL)VINYL]-3,6-DIHYDRO-2H-1,3-THIAZINE-4-CARBOXYLIC ACID, Penicillin-binding protein 2X, SULFATE ION | Authors: | Yamada, M, Watanabe, T, Takeuchi, Y. | Deposit date: | 2007-05-23 | Release date: | 2007-09-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal Structure of Cefditoren Complexed with Streptococcus pneumoniae Penicillin-Binding Protein 2X: Structural Basis for its High Antimicrobial Activity Antimicrob.Agents Chemother., 51, 2007
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2ZC4
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![BU of 2zc4 by Molmil](/molmil-images/mine/2zc4) | Penicillin-binding protein 2X (PBP 2X) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae | Descriptor: | (4R,5S)-3-(1-(4,5-dihydrothiazol-2-yl)azetidin-3-ylthio)-5-((2S,3R)-3-hydroxy-1-oxobutan-2-yl)-4-methyl-4,5- dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 2X, SULFATE ION | Authors: | Yamada, M, Watanabe, T, Takeuchi, Y. | Deposit date: | 2007-11-02 | Release date: | 2008-04-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae Antimicrob.Agents Chemother., 52, 2008
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