Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 613 件

6M8W
DownloadVisualize
BU of 6m8w by Molmil
PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIAF
分子名称: AIAF PEPTIDE INHIBITOR, CALCIUM ION, CHLORIDE ION, ...
著者Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K.
登録日2018-08-22
公開日2018-10-24
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
1GA6
DownloadVisualize
BU of 1ga6 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH A FRAGMENT OF TYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)
分子名称: ACETATE ION, CALCIUM ION, FRAGMENT OF TYROSTATIN, ...
著者Wlodawer, A, Li, M, Dauter, Z, Gustchina, A, Uchida, K.
登録日2000-11-29
公開日2000-12-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat.Struct.Biol., 8, 2001
6WPN
DownloadVisualize
BU of 6wpn by Molmil
Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Substrate-binding protein
著者Ford, B.A, Michie, K.A, Paulsen, I.T, Mabbutt, B.C, Shah, B.S.
登録日2020-04-27
公開日2021-05-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Novel functional insights into a modified sugar-binding protein from Synechococcus MITS9220.
Sci Rep, 12, 2022
1CL4
DownloadVisualize
BU of 1cl4 by Molmil
NUCLEOCAPSID PROTEIN FROM MASON-PFIZER MONKEY VIRUS (MPMV)
分子名称: PROTEIN (GAG POLYPROTEIN), ZINC ION
著者Gao, Y, Kaluarachchi, K, Giedroc, D.P.
登録日1999-05-06
公開日1999-05-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of Mason-Pfizer monkey virus (MPMV) nucleocapsid protein.
Protein Sci., 7, 1998
6M9D
DownloadVisualize
BU of 6m9d by Molmil
PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Chymostatin
分子名称: CALCIUM ION, Chymostatin A, SEDOLISIN
著者Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K.
登録日2018-08-23
公開日2018-10-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
5B12
DownloadVisualize
BU of 5b12 by Molmil
Crystal structure of the B-type halohydrin hydrogen-halide-lyase mutant F71W/Q125T/D199H from Corynebacterium sp. N-1074
分子名称: CHLORIDE ION, Halohydrin epoxidase B
著者Watanabe, F, Yu, F, Ohtaki, A, Yamanaka, Y, Noguchi, K, Odaka, M, Yohda, M.
登録日2015-11-17
公開日2016-08-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.721 Å)
主引用文献Improvement of enantioselectivity of the B-type halohydrin hydrogen-halide-lyase from Corynebacterium sp. N-1074
J.Biosci.Bioeng., 122, 2016
7CMM
DownloadVisualize
BU of 7cmm by Molmil
Crystal structure of TEAD1-YBD in complex with K-975
分子名称: N-[3-(4-chloranylphenoxy)-4-methyl-phenyl]propanamide, Transcriptional enhancer factor TEF-1
著者Tsuji, Y, Suzuki, M, Yasunaga, M, Hamguchi, K, Saito, J.
登録日2020-07-28
公開日2021-02-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The novel potent TEAD inhibitor, K-975, inhibits YAP1/TAZ-TEAD protein-protein interactions and exerts an anti-tumor effect on malignant pleural mesothelioma.
Am J Cancer Res, 10, 2020
5ICP
DownloadVisualize
BU of 5icp by Molmil
CDK8-CYCC IN COMPLEX WITH [(S)-2-(4-Chloro-phenyl)-pyrrolidin-1-yl]-(5-methyl-imidazo[5,1-b][1,3,4]thiadiazol-2-yl)-methanone
分子名称: 1,2-ETHANEDIOL, Cyclin-C, Cyclin-dependent kinase 8, ...
著者Musil, D, Blagg, J, Mallinger, A, Czodrowski, P, Schiemann, K.
登録日2016-02-23
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure-Based Optimization of Potent, Selective, and Orally Bioavailable CDK8 Inhibitors Discovered by High-Throughput Screening.
J. Med. Chem., 59, 2016
5IDN
DownloadVisualize
BU of 5idn by Molmil
CDK8-CYCC IN COMPLEX WITH [(S)-2-(4-Chloro-phenyl)-pyrrolidin-1-yl]-(3-methyl-1H-pyrazolo[3,4-b]pyridin-5-yl)-methanone
分子名称: 1,2-ETHANEDIOL, Cyclin-C, Cyclin-dependent kinase 8, ...
著者Musil, D, Blagg, J, Mallinger, A, Czodrowski, P, Schiemann, K.
登録日2016-02-24
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure-Based Optimization of Potent, Selective, and Orally Bioavailable CDK8 Inhibitors Discovered by High-Throughput Screening.
J. Med. Chem., 59, 2016
1BCO
DownloadVisualize
BU of 1bco by Molmil
BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN
分子名称: BACTERIOPHAGE MU TRANSPOSASE
著者Rice, P.A, Mizuuchi, K.
登録日1995-05-26
公開日1995-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration.
Cell(Cambridge,Mass.), 82, 1995
2RSG
DownloadVisualize
BU of 2rsg by Molmil
Solution structure of the CERT PH domain
分子名称: Collagen type IV alpha-3-binding protein
著者Sugiki, T, Takeuchi, K, Tokunaga, Y, Kumagai, K, Kawano, M, Nishijima, M, Hanada, K, Takahashi, H, Shimada, I.
登録日2012-02-25
公開日2012-08-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for the Golgi association by the pleckstrin homology domain of the ceramide trafficking protein (CERT)
J.Biol.Chem., 287, 2012
1BCM
DownloadVisualize
BU of 1bcm by Molmil
BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN WITH 2 MONOMERS PER ASYMMETRIC UNIT
分子名称: BACTERIOPHAGE MU TRANSPOSASE
著者Rice, P.A, Mizuuchi, K.
登録日1995-05-26
公開日1995-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration.
Cell(Cambridge,Mass.), 82, 1995
5KB5
DownloadVisualize
BU of 5kb5 by Molmil
Crystal structure of the adenosine kinase from Mus musculus in complex with adenosine and adenosine-diphosphate
分子名称: ADENOSINE, ADENOSINE-5'-DIPHOSPHATE, Adenosine kinase, ...
著者Oliveira, R.R, Neto, R.M, Polo, C.C, Tonoli, C.C.C, Murakami, M.T, Franchini, K.G.
登録日2016-06-02
公開日2017-06-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the adenosine kinase from Mus musculus in complex with adenosine and adenosine-diphosphate
To Be Published
7D5A
DownloadVisualize
BU of 7d5a by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(9S)-7-amino-2,2-difluoro-9-(prop-1-yn-1-yl)-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
分子名称: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
著者Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
登録日2020-09-25
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
7D5U
DownloadVisualize
BU of 7d5u by Molmil
BACE2 xaperone complex with N-{3-[(9S)-7-amino-2,2-difluoro-9-(prop-1-yn-1-yl)-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
分子名称: Beta-secretase 2, N-[3-[(9S)-7-azanyl-2,2-bis(fluoranyl)-9-prop-1-ynyl-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluoranyl-phenyl]-5-cyano-pyridine-2-carboxamide, xaperone
著者Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
登録日2020-09-28
公開日2021-03-31
最終更新日2021-04-07
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
7D2V
DownloadVisualize
BU of 7d2v by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(5R)-3-amino-2,5-dimethyl-1,1-dioxo-5,6-dihydro-2H-1lambda6,2,4-thiadiazin-5-yl]-4-fluorophenyl}-5-fluoropyridine-2-carboxamide
分子名称: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
著者Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
登録日2020-09-17
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
7D5B
DownloadVisualize
BU of 7d5b by Molmil
BACE2 xaperone complex with N-{3-[(5R)-3-amino-2,5-dimethyl-1,1-dioxo-5,6-dihydro-2H-1lambda6,2,4-thiadiazin-5-yl]-4-fluorophenyl}-5-fluoropyridine-2-carboxamide
分子名称: 1,2-ETHANEDIOL, Beta-secretase 2, CHLORIDE ION, ...
著者Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
登録日2020-09-25
公開日2021-03-31
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
7D2X
DownloadVisualize
BU of 7d2x by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(4R)-2-amino-4-(prop-1-yn-1-yl)-5,6-dihydro-4H-1,3-oxazin-4-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
分子名称: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
著者Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
登録日2020-09-17
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
5JR0
DownloadVisualize
BU of 5jr0 by Molmil
Domain 4 Segment 6 of voltage-gated sodium channel Nav1.4
分子名称: Sodium channel protein type 4 subunit alpha
著者Niitsu, A, Egawa, A, Ikeda, K, Tachibana, K, Fujiwara, T.
登録日2016-05-05
公開日2017-05-17
実験手法SOLID-STATE NMR
主引用文献Veratridine binding to a transmembrane segment of mammalian sodium channel Nav1.4 determined by solid-state NMR
To Be Published
1GA4
DownloadVisualize
BU of 1ga4 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH INHIBITOR PSEUDOIODOTYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)
分子名称: CALCIUM ION, GLYCEROL, PSEUDOIODOTYROSTATIN, ...
著者Wlodawer, A, Li, M, Dauter, Z, Gustchina, A, Uchida, K.
登録日2000-11-29
公開日2000-12-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat.Struct.Biol., 8, 2001
7C94
DownloadVisualize
BU of 7c94 by Molmil
Crystal structure of the anti-human podoplanin antibody Fab fragment complex with glycopeptide
分子名称: GLYCEROL, Heavy chain of Fab fragment, Light chain of Fab fragment, ...
著者Suzuki, K, Nakamura, S, Ogasawara, S, Naruchi, K, Shimabukuro, J, Tukahara, N, Kaneko, M.K, Kato, Y, Murata, T.
登録日2020-06-04
公開日2020-09-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Crystal structure of an anti-podoplanin antibody bound to a disialylated O-linked glycopeptide.
Biochem.Biophys.Res.Commun., 533, 2020
7C95
DownloadVisualize
BU of 7c95 by Molmil
Crystal structure of the anti-human podoplanin antibody Fab fragment
分子名称: GLYCEROL, Heavy chain of Fab fragment, Light chain of Fab fragment, ...
著者Nakamura, S, Suzuki, K, Ogasawara, S, Naruchi, K, Shimabukuro, J, Tukahara, N, Kaneko, M.K, Kato, Y, Murata, T.
登録日2020-06-04
公開日2020-09-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of an anti-podoplanin antibody bound to a disialylated O-linked glycopeptide.
Biochem.Biophys.Res.Commun., 533, 2020
1IZO
DownloadVisualize
BU of 1izo by Molmil
Cytochrome P450 BS beta Complexed with Fatty Acid
分子名称: Cytochrome P450 152A1, PALMITOLEIC ACID, PROTOPORPHYRIN IX CONTAINING FE
著者Lee, D.S, Yamada, A, Sugimoto, H, Matsunaga, I, Ogura, H, Ichihara, K, Adachi, S, Park, S.Y, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-10-10
公開日2003-03-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate Recognition and Molecular Mechanism of Fatty Acid Hydroxylation by Cytochrome P450 from Bacillus subtilis. CRYSTALLOGRAPHIC, SPECTROSCOPIC, AND MUTATIONAL STUDIES.
J.Biol.Chem., 278, 2003
5B29
DownloadVisualize
BU of 5b29 by Molmil
The 1.28A structure of human FABP3 F16V mutant complexed with palmitic acid at room temperature
分子名称: Fatty acid-binding protein, heart, PALMITIC ACID
著者Matsuoka, D, Sugiyama, S, Kakinouchi, K, Niiyama, M, Murata, M, Matsuoka, S.
登録日2016-01-12
公開日2017-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献The 1.28A structure of human FABP3 F16V mutant complexed with palmitic acid at room temperature.
To Be Published
5B27
DownloadVisualize
BU of 5b27 by Molmil
The 1.02A structure of human FABP3 M20S mutant complexed with palmitic acid
分子名称: Fatty acid-binding protein, heart, PALMITIC ACID, ...
著者Matsuoka, D, Sugiyama, S, Kakinouchi, K, Niiyama, M, Murata, M, Matsuoka, S.
登録日2016-01-12
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献The 1.02A structure of human FABP3 M20S mutant complexed with palmitic acid.
To Be Published

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon