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PDB: 613 results

1IDV
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BU of 1idv by Molmil
NMR structure of HCV ires RNA domain IIIC
Descriptor: HEPATITIS C IRES RNA DOMAIN IIIC
Authors:Kaluarachchi, K, Rijnbrand, R, Lemon, S.M, Gorenstein, D.G.
Deposit date:2001-04-05
Release date:2001-10-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites
J.Mol.Biol., 343, 2004
1EF2
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BU of 1ef2 by Molmil
CRYSTAL STRUCTURE OF MANGANESE-SUBSTITUTED KLEBSIELLA AEROGENES UREASE
Descriptor: MANGANESE (II) ION, UREASE ALPHA SUBUNIT, UREASE BETA SUBUNIT, ...
Authors:Yamaguchi, K, Cosper, N.J, Stalhandske, C, Scott, R.A, Pearson, M.A, Karplus, P.A, Hausinger, R.P.
Deposit date:2000-02-05
Release date:2000-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of metal-substituted Klebsiella aerogenes urease.
J.Biol.Inorg.Chem., 4, 1999
1R4H
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BU of 1r4h by Molmil
NMR Solution structure of the IIIc domain of GB Virus B IRES Element
Descriptor: 5'-R(*GP*GP*GP*CP*AP*AP*GP*CP*CP*C)-3'
Authors:Kaluarachchi, K, Thiviyanathan, V, Rijinbrand, R, Lemon, S.M, Gorenstein, D.G.
Deposit date:2003-10-06
Release date:2004-10-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites.
J.Mol.Biol., 343, 2004
1K9L
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BU of 1k9l by Molmil
Solution Structure of DNA TATGAGCGCTCATA
Descriptor: 5'-D(*TP*AP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*TP*A)-3'
Authors:Kaluarachchi, K, Gorenstein, D.G, Luxon, B.A.
Deposit date:2001-10-29
Release date:2001-11-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:How Do Proteins Recognize DNA? Solution Structure and Local Conformational Dynamics of Lac Operators by 2D NMR
J.Biomol.Struct.Dyn., Conversation 11, 2000
3WIT
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BU of 3wit by Molmil
Crystal structure of the C-terminal region of VgrG1 from E. coli O157 EDL933
Descriptor: Putative Vgr protein
Authors:Uchida, K, Leiman, P.G, Arisaka, F, Kanamaru, S.
Deposit date:2013-09-25
Release date:2013-12-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and properties of the C-terminal beta-helical domain of VgrG protein from Escherichia coli O157
J.Biochem., 155, 2014
1K9H
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BU of 1k9h by Molmil
NMR structure of DNA TGTGAGCGCTCACA
Descriptor: 5'-D(*TP*GP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*CP*A)-3'
Authors:Kaluarachchi, K, Gorenstein, D.G, Luxon, B.A.
Deposit date:2001-10-29
Release date:2001-11-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:How Do Proteins Recognize DNA? Solution Structure and Local Conformational Dynamics of Lac Operators by 2D NMR
J.Biomol.Struct.Dyn., Conversation 11, 2000
2E11
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BU of 2e11 by Molmil
The Crystal Structure of XC1258 from Xanthomonas campestris: A CN-hydrolase Superfamily Protein with an Arsenic Adduct in the Active Site
Descriptor: CACODYLATE ION, Hydrolase
Authors:Chin, K.-H, Tsai, Y.-D, Chan, N.-L, Huang, K.-F, Wang, A.H.-J, Chou, S.-H.
Deposit date:2006-10-17
Release date:2007-08-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The crystal structure of XC1258 from Xanthomonas campestris: A putative procaryotic Nit protein with an arsenic adduct in the active site
Proteins, 69, 2007
3ATY
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BU of 3aty by Molmil
Crystal structure of TcOYE
Descriptor: FLAVIN MONONUCLEOTIDE, Prostaglandin F2a synthase
Authors:Yamaguchi, K, Okamoto, N, Tokuoka, K, Sugiyama, S, Uchiyama, N, Matsumura, H, Inaka, K, Urade, Y, Inoue, T.
Deposit date:2011-01-26
Release date:2011-05-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insight into the stereoselective production of PGF2(alpha) by Old Yellow Enzyme from Trypanosoma cruzi
J.Biochem., 150, 2011
2DDX
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BU of 2ddx by Molmil
Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4
Descriptor: GLYCEROL, MAGNESIUM ION, beta-1,3-xylanase
Authors:Sakaguchi, K.
Deposit date:2006-02-06
Release date:2007-02-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Atomic resolution analysis of beta-1,3-xylanase catalytic module from Vibrio sp. AX-4
To be Published
3RZ4
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BU of 3rz4 by Molmil
Hen egg-white lysozyme in HEPES buffer at pH 7.5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme C
Authors:Peretoltchine, K, Bryson, S, Pai, E.F.
Deposit date:2011-05-11
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hen egg-white lysozyme in HEPES buffer at pH 7.5
To be Published
2E12
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BU of 2e12 by Molmil
The crystal structure of XC5848 from Xanthomonas campestris adopting a novel variant of Sm-like motif
Descriptor: Hypothetical protein XCC3642
Authors:Chin, K.-H, Ruan, S.-K, Wang, A.H.-J, Chou, S.-H.
Deposit date:2006-10-17
Release date:2007-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:XC5848, an ORFan protein from Xanthomonas campestris, adopts a novel variant of Sm-like motif
Proteins, 68, 2007
4AUR
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BU of 4aur by Molmil
LeoA bacterial dynamin GTPase from ETEC
Descriptor: LEOA, SULFATE ION
Authors:Michie, K.A, Low, H.H, Lowe, J.
Deposit date:2012-05-21
Release date:2013-08-28
Last modified:2014-10-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Leoa, B and C from Enterotoxigenic Escherichia Coli (Etec) are Bacterial Dynamins.
Plos One, 9, 2014
4AE3
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BU of 4ae3 by Molmil
Crystal structure of ammosamide 272:myosin-2 motor domain complex
Descriptor: 1,2-ETHANEDIOL, ADP ORTHOVANADATE, AMMOSAMIDE 272, ...
Authors:Chinthalapudi, K, Heissler, S.M, Fenical, W, Manstein, D.J.
Deposit date:2012-01-05
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Ammosamide Mediated Myosin Motor Activity Inhibition
To be Published
2FA5
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BU of 2fa5 by Molmil
The crystal structure of an unliganded multiple antibiotic-resistance repressor (MarR) from Xanthomonas campestris
Descriptor: CHLORIDE ION, transcriptional regulator marR/emrR family
Authors:Chin, K.H, Tu, Z.L, Li, J.N, Chou, C.C, Wang, A.H.J, Chou, S.H.
Deposit date:2005-12-06
Release date:2006-11-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of XC1739: a putative multiple antibiotic-resistance repressor (MarR) from Xanthomonas campestris at 1.8 A resolution
Proteins, 65, 2006
2XEL
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BU of 2xel by Molmil
Molecular Mechanism of Pentachloropseudilin Mediated Inhibition of Myosin Motor Activity
Descriptor: 2,4-DICHLORO-6-(3,4,5-TRICHLORO-1H-PYRROL-2YL)PHENOL, ADP METAVANADATE, MAGNESIUM ION, ...
Authors:Chinthalapudi, K, Taft, M.H, Martin, R, Hartmann, F.K, Heissler, S.M, Tsiavaliaris, G, Gutzeit, H.O, Knoelker, H.J, Coluccio, L.M, Fedorov, R, Manstein, D.J.
Deposit date:2010-05-16
Release date:2011-06-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism and Specificity of Pentachloropseudilin-Mediated Inhibition of Myosin Motor Activity.
J.Biol.Chem., 286, 2011
7K66
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BU of 7k66 by Molmil
Structure of Blood Coagulation Factor VIII in Complex with an Anti-C1 Domain Pathogenic Antibody Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2A9 heavy chain, ...
Authors:Childers, K.C, Gish, J, Jarvis, L, Peters, S, Garrels, C, Smith, I.W, Spencer, H.T, Spiegel, P.C.
Deposit date:2020-09-18
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Structure of blood coagulation factor VIII in complex with an anti-C1 domain pathogenic antibody inhibitor.
Blood, 137, 2021
2XJ9
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BU of 2xj9 by Molmil
Dimer Structure of the bacterial cell division regulator MipZ
Descriptor: MAGNESIUM ION, MIPZ, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Michie, K.A, Lowe, J.
Deposit date:2010-07-02
Release date:2011-07-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Localized Dimerization and Nucleoid Binding Drive Gradient Formation by the Bacterial Cell Division Inhibitor Mipz.
Mol.Cell, 46, 2012
2XJ4
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BU of 2xj4 by Molmil
Structure of the bacterial cell division regulator protein MipZ
Descriptor: MIPZ
Authors:Michie, K.A, Lowe, J.
Deposit date:2010-07-02
Release date:2011-07-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Localized Dimerization and Nucleoid Binding Drive Gradient Formation by the Bacterial Cell Division Inhibitor Mipz.
Mol.Cell, 46, 2012
2P0Y
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BU of 2p0y by Molmil
Crystal structure of Q88YI3_LACPL from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR6
Descriptor: Hypothetical protein lp_0780
Authors:Benach, J, Chen, Y, Seetharaman, J, Chi, K.H, Janjua, H, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-03-01
Release date:2007-03-27
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Q88YI3_LACPL from Lactobacillus plantarum.
To be Published
4ZMU
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BU of 4zmu by Molmil
Dcsbis, a diguanylate cyclase from Pseudomonas aeruginosa
Descriptor: diguanylate cyclase
Authors:Chen, Y, Liu, C, Liu, S, Chi, K, Gu, L.
Deposit date:2015-05-04
Release date:2016-05-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:crystal structure of Dcsbis from Pseudomonas aeruginosa
To Be Published
4ZMM
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BU of 4zmm by Molmil
GGDEF domain of Dcsbis complexed with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), diguanylate cyclase
Authors:Chen, Y, Liu, C, Liu, S, Chi, K, Gu, L.
Deposit date:2015-05-04
Release date:2016-05-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Crystal structure of Dcsbis GGDEF domain complexed with c-di-GMP
To Be Published
1LZ6
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BU of 1lz6 by Molmil
STRUCTURAL AND FUNCTIONAL ANALYSES OF THE ARG-GLY-ASP SEQUENCE INTRODUCED INTO HUMAN LYSOZYME
Descriptor: CHLORIDE ION, HUMAN LYSOZYME
Authors:Matsushima, M, Inaka, K, Yamada, T, Sekiguchi, K, Kikuchi, M.
Deposit date:1993-02-03
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional analyses of the Arg-Gly-Asp sequence introduced into human lysozyme.
J.Biol.Chem., 268, 1993
1VD8
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BU of 1vd8 by Molmil
Solution structure of FMBP-1 tandem repeat 2
Descriptor: fibroin-modulator-binding-protein-1
Authors:Yamaki, T, Kawaguchi, K, Aizawa, T, Takiya, S, Demura, M, Nitta, K.
Deposit date:2004-03-20
Release date:2005-03-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of FMBP-1 tandem repeat 2
To be Published
8IVG
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BU of 8ivg by Molmil
Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1/Nrf2 PPI Inhibitor for Treatment of Chronic Kidney Disease
Descriptor: (3S)-3-(4-methylphenyl)-3-[2-(5,6,7,8-tetrahydronaphthalen-2-yl)ethanoylamino]propanoic acid, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Kelch-like ECH-associated protein 1, ...
Authors:Otake, K, Ubukata, M, Nagahashi, N, Ogawa, N, Hantani, Y, Hantani, R, Adachi, T, Nomura, A, Yamaguchi, K, Maekawa, M, Mamada, H, Motomura, T, Sato, M, Harada, K.
Deposit date:2023-03-27
Release date:2023-06-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1-Nrf2 PPI Inhibitor.
Acs Med.Chem.Lett., 14, 2023
8IXS
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BU of 8ixs by Molmil
Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1/Nrf2 PPI Inhibitor for Treatment of Chronic Kidney Disease
Descriptor: (2R,3S)-3-[[(2S)-2-fluoranyl-2-(5,6,7,8-tetrahydronaphthalen-2-yl)ethanoyl]amino]-2-methyl-3-(4-methylphenyl)propanoic acid, Kelch-like ECH-associated protein 1, SULFATE ION
Authors:Nomura, A, Yamaguchi, K, Adachi, T.
Deposit date:2023-04-03
Release date:2023-06-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1-Nrf2 PPI Inhibitor.
Acs Med.Chem.Lett., 14, 2023

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