Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1027 件

3KO6
DownloadVisualize
BU of 3ko6 by Molmil
Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate
分子名称: METHIONINE SULFOXIDE, UPF0067 GAF domain-containing protein YKL069W
著者Ma, X.-X, Guo, P.-C, Chen, Y, Zhou, C.-Z.
登録日2009-11-13
公開日2010-11-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate
To be Published
3L4N
DownloadVisualize
BU of 3l4n by Molmil
Crystal structure of yeast monothiol glutaredoxin Grx6
分子名称: GLUTATHIONE, Monothiol glutaredoxin-6
著者Luo, M, Jiang, Y.-L, Ma, X.-X, He, Y.-X, Tang, Y.-J, Yu, J, Zhang, R.-G, Chen, Y, Zhou, C.-Z.
登録日2009-12-21
公開日2010-04-07
最終更新日2011-12-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and biochemical characterization of yeast monothiol glutaredoxin Grx6
J.Mol.Biol., 398, 2010
7STA
DownloadVisualize
BU of 7sta by Molmil
X-ray Crystal Structure of Truncated Human Chemokine CCL19 (7-70)
分子名称: C-C motif chemokine 19
著者Lewandowski, E.M, Kroeck, K, Chen, Y.
登録日2021-11-12
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Insights into Molecular Recognition by Human Chemokine CCL19.
Biochemistry, 61, 2022
7RSJ
DownloadVisualize
BU of 7rsj by Molmil
Structure of the VPS34 kinase domain with compound 14
分子名称: 1,2-ETHANEDIOL, GLYCEROL, N-{4-[(7R,8R)-4-oxo-7-(propan-2-yl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazin-2-yl]pyridin-2-yl}cyclopropanecarboxamide, ...
著者Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
登録日2021-08-11
公開日2021-11-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.881 Å)
主引用文献Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSV
DownloadVisualize
BU of 7rsv by Molmil
Structure of the VPS34 kinase domain with compound 5
分子名称: (5aS,8aR,9S)-2-[(3R)-3-methylmorpholin-4-yl]-5,5a,6,7,8,8a-hexahydro-4H-cyclopenta[e]pyrazolo[1,5-a]pyrazin-4-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
著者Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
登録日2021-08-11
公開日2021-11-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSP
DownloadVisualize
BU of 7rsp by Molmil
Structure of the VPS34 kinase domain with compound 14
分子名称: (7R,8R)-2-[(3R)-3-methylmorpholin-4-yl]-7-(propan-2-yl)-6,7-dihydropyrazolo[1,5-a]pyrazin-4(5H)-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
著者Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
登録日2021-08-11
公開日2021-11-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
4XXR
DownloadVisualize
BU of 4xxr by Molmil
Atomic Resolution X-Ray Crystal Structure of a Ruthenocene Conjugated Beta-Lactam Antibiotic in Complex with CTX-M-14 E166A Beta-Lactamase
分子名称: CTX-M-14 Class A Beta-Lactamase, POTASSIUM ION, [(1,2,3,4,5-eta)-1-(4-{[(4-carboxy-5,5-dimethyl-1,3-thiazolidin-2-yl)methyl]amino}-4-oxobutanoyl)cyclopentadienyl][(1,2,3,4,5-eta)-cyclopentadienyl]ruthenium, ...
著者Lewandowski, E.M, Chen, Y.
登録日2015-01-30
公開日2015-03-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Antibacterial properties and atomic resolution X-ray complex crystal structure of a ruthenocene conjugated beta-lactam antibiotic.
Chem.Commun.(Camb.), 51, 2015
6LHD
DownloadVisualize
BU of 6lhd by Molmil
Crystal structure of p53/BCL-xL fusion complex
分子名称: ZINC ION, fusion protein of Bcl-2-like protein 1 and Isoform 6 of Cellular tumor antigen p53
著者Wei, H, Chen, Y.
登録日2019-12-07
公開日2021-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structural insight into the molecular mechanism of p53-mediated mitochondrial apoptosis.
Nat Commun, 12, 2021
2R76
DownloadVisualize
BU of 2r76 by Molmil
Crystal structure of the rare lipoprotein B (SO_1173) from Shewanella oneidensis, Northeast Structural Genomics Consortium Target SoR91A
分子名称: Rare lipoprotein B
著者Forouhar, F, Chen, Y, Seetharaman, J, Mao, L, Maglaqui, M, Owen, L.A, Cunningham, K, Fang, Y, Xiao, R, Baran, M.C, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-09-07
公開日2007-09-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the rare lipoprotein B (SO_1173) from Shewanella oneidensis.
To be Published
2RJB
DownloadVisualize
BU of 2rjb by Molmil
Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276
分子名称: Uncharacterized protein, ZINC ION
著者Seetharaman, J, Chen, Y, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xia, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2007-10-14
公開日2007-10-30
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338.
To be Published
1P2A
DownloadVisualize
BU of 1p2a by Molmil
The structure of cyclin dependent kinase 2 (CKD2) with a trisubstituted naphthostyril inhibitor
分子名称: 5-[(2-AMINOETHYL)AMINO]-6-FLUORO-3-(1H-PYRROL-2-YL)BENZO[CD]INDOL-2(1H)-ONE, Cell division protein kinase 2
著者Liu, J.-J, Dermatakis, A, Lukacs, C.M, Konzelmann, F, Chen, Y, Kammlott, U, Depinto, W, Yang, H, Yin, X, Chen, Y, Schutt, A, Simcox, M.E, Luk, K.-C.
登録日2003-04-15
公開日2003-07-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献3,5,6-Trisubstituted Naphthostyrils as CDK2 Inhibitors
BIOORG.MED.CHEM., 13, 2003
4U1Q
DownloadVisualize
BU of 4u1q by Molmil
Crystal structure of S-adenosylmethionine-dependent methyltransferase SibL in complex with 3HK and SAH
分子名称: (2S)-2-amino-4-(2-amino-3-hydroxyphenyl)-4-oxobutanoic acid, S-ADENOSYL-L-HOMOCYSTEINE, SibL
著者liu, J.S, Chen, S.C, Yang, C.S, Huang, C.H, Chen, Y.
登録日2014-07-16
公開日2015-08-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.085 Å)
主引用文献Crystal structure of S-adenosylmethionine-dependent methyltransferase SibL in complex with 3HK and SAH
To Be Published
4U88
DownloadVisualize
BU of 4u88 by Molmil
Structure of the DNA-Binding Domain of the Response Regulator SaeR from Staphylococcus aureus
分子名称: Transcriptional regulator SaeR
著者Liu, J.S, Huang, C.H, Yang, C.S, Chen, S.C, Chen, Y.
登録日2014-08-01
公開日2015-08-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.355 Å)
主引用文献Structure of the DNA-Binding Domain of the Response Regulator SaeR from Staphylococcus aureus
To Be Published
7V35
DownloadVisualize
BU of 7v35 by Molmil
Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GCGR-Gs complex
分子名称: Glucagon receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Zhao, F.h, Zhou, Q.T, Cong, Z.T, Hang, K.N, Zou, X.Y, Zhang, C, Chen, Y, Dai, A.T, Liang, A.Y, Ming, Q.Q, Wang, M, Chen, L.N, Xu, P.Y, Chang, R.L, Feng, W.B, Xia, T, Zhang, Y, Wu, B.L, Yang, D.H, Zhao, L.H, Xu, H.E, Wang, M.W.
登録日2021-08-10
公開日2022-03-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors.
Nat Commun, 13, 2022
7PKS
DownloadVisualize
BU of 7pks by Molmil
Structural basis of Integrator-mediated transcription regulation
分子名称: DNA Template, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Fianu, I, Chen, Y, Dienemann, C, Cramer, P.
登録日2021-08-26
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of Integrator-mediated transcription regulation.
Science, 374, 2021
4RM0
DownloadVisualize
BU of 4rm0 by Molmil
Crystal structure of Norovirus OIF P domain in complex with Lewis a trisaccharide
分子名称: Capsid protein, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Liu, W, Chen, Y, Tan, M, Xia, M, Li, X, Jiang, X, Rao, Z.
登録日2014-10-18
公開日2015-06-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献A Unique Human Norovirus Lineage with a Distinct HBGA Binding Interface.
Plos Pathog., 11, 2015
4RLZ
DownloadVisualize
BU of 4rlz by Molmil
Crystal structure of Norovirus OIF P domain
分子名称: Capsid protein, GLYCEROL
著者Liu, W, Chen, Y, Tan, M, Xia, M, Li, X, Jiang, X, Rao, Z.
登録日2014-10-18
公開日2015-06-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献A Unique Human Norovirus Lineage with a Distinct HBGA Binding Interface.
Plos Pathog., 11, 2015
4UAI
DownloadVisualize
BU of 4uai by Molmil
Crystal structure of CXCL12 in complex with inhibitor
分子名称: 1-phenyl-3-[4-(1H-tetrazol-5-yl)phenyl]urea, SULFATE ION, Stromal cell-derived factor 1
著者Smith, E.W, Chen, Y.
登録日2014-08-09
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine.
J.Med.Chem., 57, 2014
5SY1
DownloadVisualize
BU of 5sy1 by Molmil
Structure of the STRA6 receptor for retinol uptake in complex with calmodulin
分子名称: CALCIUM ION, CHOLESTEROL, Calmodulin, ...
著者Clarke, O.B, Chen, Y, Mancia, F.
登録日2016-08-10
公開日2016-08-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the STRA6 receptor for retinol uptake.
Science, 353, 2016
6L8L
DownloadVisualize
BU of 6l8l by Molmil
C-Src in complex with ibrutinib
分子名称: 1-{(3R)-3-[4-amino-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl}prop-2-en-1-one, Proto-oncogene tyrosine-protein kinase Src
著者Guo, M, Dai, S, Chen, L, Chen, Y.
登録日2019-11-06
公開日2020-11-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.888 Å)
主引用文献Characterization of ibrutinib as a non-covalent inhibitor of SRC-family kinases.
Bioorg.Med.Chem.Lett., 34, 2020
8HYK
DownloadVisualize
BU of 8hyk by Molmil
CD-NTase EfCdnE in complex with intermediate pppU[2'-5']p
分子名称: EfCdnE, MAGNESIUM ION, [[(2R,3R,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日2023-01-06
公開日2023-07-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.021 Å)
主引用文献Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
6L2W
DownloadVisualize
BU of 6l2w by Molmil
Crystal structure of a novel fold protein Gp72 from the freshwater cyanophage Mic1
分子名称: freshwater cyanophage protein
著者Wang, Y, Jin, H, Yang, F, Jiang, Y.L, Zhao, Y.Y, Chen, Z.P, Li, W.F, Chen, Y, Zhou, C.Z, Li, Q.
登録日2019-10-07
公開日2020-05-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Crystal structure of a novel fold protein Gp72 from the freshwater cyanophage Mic1.
Proteins, 88, 2020
7MP7
DownloadVisualize
BU of 7mp7 by Molmil
Rules for designing protein fold switches and their implications for the folding code
分子名称: Sb3
著者He, Y, Chen, Y, Ruan, B, Choi, J, Chen, Y, Motabar, D, Solomon, T, Simmerman, R, Kauffman, T, Gallagher, T, Bryan, P, Orban, J.
登録日2021-05-04
公開日2022-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design and characterization of a protein fold switching network.
Nat Commun, 14, 2023
7MQ4
DownloadVisualize
BU of 7mq4 by Molmil
Rules for designing protein fold switches and their implications for the folding code
分子名称: Sb1
著者He, Y, Chen, Y, Ruan, B, Choi, J, Chen, Y, Motabar, D, Solomon, T, Simmerman, R, Kauffman, T, Gallagher, T, Bryan, P, Orban, J.
登録日2021-05-05
公開日2022-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design and characterization of a protein fold switching network.
Nat Commun, 14, 2023
7MN2
DownloadVisualize
BU of 7mn2 by Molmil
Rules for designing protein fold switches and their implications for the folding code
分子名称: Sb2
著者He, Y, Chen, Y, Ruan, B, Choi, J, Chen, Y, Motabar, D, Solomon, T, Simmerman, R, Kauffman, T, Gallagher, T, Bryan, P, Orban, J.
登録日2021-04-30
公開日2022-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design and characterization of a protein fold switching network.
Nat Commun, 14, 2023

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon