PDB Search results for query - Protein Data Bank Japan

PDB: 58 results

CRYSTAL STRUCTURE OF THE THIRD PDZ DOMAIN FROM THE HUMAN HOMOLOG OF DISCS LARGE PROTEIN
Descriptor:	HUMAN DISCS LARGE PROTEIN
Authors:	Cabral, J.M, Liddington, R.
Deposit date:	1996-07-26
Release date:	1997-07-23
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Crystal structure of a PDZ domain. Nature, 382, 1996

1AB4

59KDA FRAGMENT OF GYRASE A FROM E. COLI
Descriptor:	GYRASE A
Authors:	Cabral, J.H.M, Maxwell, A, Liddington, R.C.
Deposit date:	1997-02-03
Release date:	1998-10-14
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Crystal structure of the breakage-reunion domain of DNA gyrase. Nature, 388, 1997

1BYW

STRUCTURE OF THE N-TERMINAL DOMAIN OF THE HUMAN-ERG POTASSIUM CHANNEL
Descriptor:	PROTEIN (HUMAN ERG POTASSIUM CHANNEL)
Authors:	Cabral, J.H.M, Lee, A, Mackinnon, R.
Deposit date:	1998-10-15
Release date:	1998-12-16
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal Structure and Functional Analysis of the Herg Potassium Channel N-Terminus: A Eukaryotic Pas Domain Cell(Cambridge,Mass.), 95, 1998

3CL1

M. loti cyclic-nucleotide binding domain, cyclic-GMP bound
Descriptor:	CHLORIDE ION, CYCLIC GUANOSINE MONOPHOSPHATE, Mll3241 protein, ...
Authors:	Clayton, G.M, Alteiri, S.L, Thomas, L.R, Morais-Cabral, J.H.
Deposit date:	2008-03-18
Release date:	2008-08-05
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structural and Energetic Analysis of Activation by a Cyclic Nucleotide Binding Domain. J.Mol.Biol., 381, 2008

1J95

KCSA potassium channel with TBA (tetrabutylammonium) and potassium
Descriptor:	POTASSIUM ION, TETRABUTYLAMMONIUM ION, VOLTAGE-GATED POTASSIUM CHANNEL
Authors:	Morais-Cabral, J.H, MacKinnon, R, Zhou, M.
Deposit date:	2001-05-23
Release date:	2001-06-13
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Potassium channel receptor site for the inactivation gate and quaternary amine inhibitors Nature, 411, 2001

6ZHV

Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic
Descriptor:	2-[2-(2-octoxyethoxy)ethoxy]ethanol, MAGNESIUM ION, Outer membrane porin F, ...
Authors:	Sousa, C.F, Morais-Cabral, J, Gameiro, P.
Deposit date:	2020-06-23
Release date:	2021-05-05
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (1.945 Å)
Cite:	Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic To Be Published

3CO2

Mlotik1 ion channel cyclic-nucleotide binding domain mutant
Descriptor:	Mlotik1 ion channel protein
Authors:	Clayton, G.M, Alteiri, S.L, Thomas, L.R, Morais-Cabral, J.H.
Deposit date:	2008-03-27
Release date:	2008-08-05
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Structural and Energetic Analysis of Activation by a Cyclic Nucleotide Binding Domain. J.Mol.Biol., 381, 2008

8POO

Low resolution structure of inactive conformation of the Ktr cation channel in presence of ATP and c-di-AMP
Descriptor:	Ktr system potassium uptake protein A, Ktr system potassium uptake protein B
Authors:	Cereija, T.B, Teixeira-Duarte, C.M, Morais-Cabral, J.H.
Deposit date:	2023-07-05
Release date:	2024-05-15
Method:	X-RAY DIFFRACTION (5.77 Å)
Cite:	c-di-AMP determines the hierarchical organization of bacterial RCK proteins. Proc.Natl.Acad.Sci.USA, 121, 2024

6ZHP

Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic
Descriptor:	2-[2-(2-octoxyethoxy)ethoxy]ethanol, MAGNESIUM ION, Outer membrane porin F, ...
Authors:	Sousa, C.F, Morais-Cabral, J, Gameiro, P.
Deposit date:	2020-06-23
Release date:	2021-05-05
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (2.053 Å)
Cite:	Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic To Be Published

6I8V

KtrC with ATP bound
Descriptor:	1,4-BUTANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:	Rocha, R, Morais-Cabral, J.H.
Deposit date:	2018-11-21
Release date:	2019-10-30
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (1.991 Å)
Cite:	Characterization of the molecular properties of KtrC, a second RCK domain that regulates a Ktr channel in Bacillus subtilis. J.Struct.Biol., 205, 2019

4MUV

M. loti cyclic-nucleotide binding domain mutant displaying inverted ligand selectivity, cyclic-GMP bound
Descriptor:	CYCLIC GUANOSINE MONOPHOSPHATE, Cyclic nucleotide-gated potassium channel mll3241, SODIUM ION
Authors:	Fonseca, F, Pessoa, J, Morais-Cabral, J.H.
Deposit date:	2013-09-23
Release date:	2014-06-25
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.25 Å)
Cite:	Determinants of ligand selectivity in a cyclic nucleotide-regulated potassium channel. J.Gen.Physiol., 144, 2014

4F8A

Cyclic nucleotide binding-homology domain from mouse EAG1 potassium channel
Descriptor:	Potassium voltage-gated channel subfamily H member 1
Authors:	Marques-Carvalho, M.J, Sahoo, N, Muskett, F.W, Vieira-Pires, R.S, Gabant, G, Cadene, M, Schonherr, R, Morais-Cabral, J.H.
Deposit date:	2012-05-17
Release date:	2012-07-11
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Structural, Biochemical, and Functional Characterization of the Cyclic Nucleotide Binding Homology Domain from the Mouse EAG1 Potassium Channel. J.Mol.Biol., 423, 2012

6EP3

Lar controls the expression of the Listeria monocytogenes agr system and mediates virulence.
Descriptor:	1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lmo0651 protein, ...
Authors:	Pinheiro, J, Lisboa, J, Carvalho, F, Carreaux, A, Santos, N, Cabral, J, Sousa, S, Cabanes, D.
Deposit date:	2017-10-10
Release date:	2018-07-25
Last modified:	2024-05-08
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	MouR controls the expression of the Listeria monocytogenes Agr system and mediates virulence. Nucleic Acids Res., 46, 2018

1U12

M. loti cyclic nucleotide binding domain mutant
Descriptor:	IODIDE ION, POTASSIUM ION, SULFATE ION, ...
Authors:	Clayton, G.M, Silverman, W.R, Heginbotham, L, Morais-Cabral, J.H.
Deposit date:	2004-07-14
Release date:	2004-11-30
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Structural Basis of Ligand Activation in a Cyclic Nucleotide Regulated Potassium Channel Cell(Cambridge,Mass.), 119, 2004

1VP6

M.loti ion channel cylic nucleotide binding domain
Descriptor:	ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, BROMIDE ION, Cyclic-nucleotide binding domain of mesorhizobium loti CNG potassium channel
Authors:	Clayton, G.M, Silverman, W.R, Heginbotham, L, Morais-Cabral, J.H.
Deposit date:	2004-10-14
Release date:	2004-10-26
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Structural basis of ligand activation in a cyclic nucleotide regulated potassium channel. Cell(Cambridge,Mass.), 119, 2004

7AGV

High-resolution structure of the K+/H+ antiporter subunit KhtT in complex with c-di-AMP
Descriptor:	(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ACETATE ION, CALCIUM ION, ...
Authors:	Cereija, T.B, Guerra, J.P, Morais-Cabral, J.H.
Deposit date:	2020-09-23
Release date:	2021-03-31
Last modified:	2024-05-01
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021

5BUT

Crystal structure of inactive conformation of KtrAB K+ transporter
Descriptor:	Ktr system potassium uptake protein A,Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, POTASSIUM ION
Authors:	Vieira-Pires, R.S, Morais-Cabral, J.H.
Deposit date:	2015-06-04
Release date:	2016-01-27
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (5.97 Å)
Cite:	Dissecting the Molecular Mechanism of Nucleotide-Dependent Activation of the KtrAB K+ Transporter. Plos Biol., 14, 2016

7AHM

Low-resolution structure of the K+/H+ antiporter subunit KhtT in complex with c-di-AMP
Descriptor:	(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, K(+)/H(+) antiporter subunit KhtT
Authors:	Cereija, T.B, Guerra, J.P, Morais-Cabral, J.H.
Deposit date:	2020-09-24
Release date:	2021-03-31
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (3.14 Å)
Cite:	c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021

5HIT

Crystal Structure Analysis of Ca2+-calmodulin and a C-terminal EAG1 channel fragment
Descriptor:	CALCIUM ION, Calmodulin, Potassium voltage-gated channel subfamily H member 1
Authors:	Marques-Carvalho, M.J, Morais-Cabral, J.H.
Deposit date:	2016-01-12
Release date:	2016-09-14
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.85 Å)
Cite:	Molecular Insights into the Mechanism of Calmodulin Inhibition of the EAG1 Potassium Channel. Structure, 24, 2016

8BZ7

Crystal structure of the L. monocytogenes RmlT in complex with TDP-rhamnose
Descriptor:	2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, CHLORIDE ION, D(-)-TARTARIC ACID, ...
Authors:	Cereija, T.B, Morais-Cabral, J.H.
Deposit date:	2022-12-14
Release date:	2023-12-27
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Crystal structure of the L. monocytogenes RmlT in complex with TDP-rhamnose To Be Published

8BZ6

Crystal structure of the L. monocytogenes RmlT in complex with UDP-glucose
Descriptor:	ACETATE ION, CHLORIDE ION, Glycosyltransferase, ...
Authors:	Cereija, T.B, Morais-Cabral, J.H.
Deposit date:	2022-12-14
Release date:	2023-12-27
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Crystal structure of the L. monocytogenes RmlT in complex with UDP-glucose To Be Published

8BZ8

Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose
Descriptor:	2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, CHLORIDE ION, D(-)-TARTARIC ACID, ...
Authors:	Cereija, T.B, Morais-Cabral, J.H.
Deposit date:	2022-12-14
Release date:	2023-12-27
Method:	X-RAY DIFFRACTION (2.52 Å)
Cite:	Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose To Be Published

8BZ5

Crystal structure of the L. monocytogenes RmlT in complex with HEPES
Descriptor:	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glycosyltransferase
Authors:	Cereija, T.B, Morais-Cabral, J.H.
Deposit date:	2022-12-14
Release date:	2023-12-27
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structure of the L. monocytogenes RmlT in complex with HEPES To Be Published

7AGY

Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 8.5
Descriptor:	K(+)/H(+) antiporter subunit KhtT
Authors:	Cereija, T.B, Morais-Cabral, J.H.
Deposit date:	2020-09-23
Release date:	2021-03-31
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (1.54 Å)
Cite:	c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021

7AHT

Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 7.5
Descriptor:	K(+)/H(+) antiporter subunit KhtT
Authors:	Cereija, T.B, Morais-Cabral, J.H.
Deposit date:	2020-09-25
Release date:	2021-03-31
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (2.16 Å)
Cite:	c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021

12 3 >

Total results:	58
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Cabral, J"