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PDB: 271 件

7YKT
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Cryo-EM structure of Drg1 hexamer in helical state treated with ADP/AMPPNP/benzo-diazaborine
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family gene 2 protein
著者Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
登録日2022-07-23
公開日2022-12-14
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7YKZ
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Cryo-EM structure of Drg1 hexamer in the planar state treated with ADP/AMPPNP/Diazaborine
分子名称: 2-(TOLUENE-4-SULFONYL)-2H-BENZO[D][1,2,3]DIAZABORININ-1-OL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
登録日2022-07-25
公開日2022-12-14
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7YKL
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Cryo-EM structure of Drg1 hexamer treated with AMPPNP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATPase family gene 2 protein
著者Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
登録日2022-07-22
公開日2022-12-14
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7YKK
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BU of 7ykk by Molmil
Cryo-EM structure of Drg1 hexamer treated with ADP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATPase family gene 2 protein
著者Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
登録日2022-07-22
公開日2022-12-14
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7DGW
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De novo designed protein H4A2S
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, de novo designed protein H4A2S
著者Xu, Y, Liao, S, Chen, Q, Liu, H.
登録日2020-11-12
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DGU
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De novo designed protein H4A1R
分子名称: de novo designed protein H4A1R
著者Xu, Y, Liao, S, Chen, Q, Liu, H.
登録日2020-11-12
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7EI1
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BU of 7ei1 by Molmil
Structure of Pyrococcus furiosus Cas1Cas2 complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2
著者Yu, Y, Chen, Q.
登録日2021-03-30
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献A distinct structure of Cas1-Cas2 complex provides insights into the mechanism for the longer spacer acquisition in Pyrococcus furiosus.
Int.J.Biol.Macromol., 183, 2021
7DGY
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De novo designed protein H4C2R
分子名称: de novo designed protein H4C2R
著者Xu, Y, Liao, S, Chen, Q, Liu, H.
登録日2020-11-12
公開日2021-12-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7CR6
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Synechocystis Cas1-Cas2/prespacer binary complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2 1, DNA (36-MER)
著者Yu, Y, Chen, Q.
登録日2020-08-12
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.72 Å)
主引用文献Mechanisms of spacer acquisition by sequential assembly of the adaptation module in Synechocystis.
Nucleic Acids Res., 49, 2021
7CR8
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Synechocystis Cas1-Cas2-prespacerL complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2 1, DNA (36-MER)
著者Yu, Y, Chen, Q.
登録日2020-08-12
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Mechanisms of spacer acquisition by sequential assembly of the adaptation module in Synechocystis.
Nucleic Acids Res., 49, 2021
4Z8U
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CRYSTAL STRUCTURE OF AvrRxo1-ORF1:-ORF2 WITH ATP
分子名称: ACETATE ION, AvrRxo1-ORF1, AvrRxo1-ORF2, ...
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8T
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CRYSTAL STRUCTURE OF AvrRxo1-ORF1:AvrRxo1-ORF2 WITH SULPHATE IONS
分子名称: ACETATE ION, AvrRxo1-ORF1, AvrRxo1-ORF2, ...
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8V
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CRYSTAL STRUCTURE OF AVRRXO1-ORF1:-ORF2 COMPLEX, NATIVE.
分子名称: AvrRxo1-ORF1, AvrRxo1-ORF2, PHOSPHATE ION
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8Q
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BU of 4z8q by Molmil
CRYSTAL STRUCTURE OF AvrRxo1-ORF1:AvrRxo1-ORF2 COMPLEX, SELENOMETHIONINE SUBSTITUTED.
分子名称: AvrRxo1-ORF1, AvrRxo1-ORF2, PHOSPHATE ION
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
6EDR
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BU of 6edr by Molmil
Crystal Structure of Human CD38 in Complex with 4'-Thioribose NAD+
分子名称: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)thiolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Dai, Z, Zhang, X.N, Nasertorabi, F, Cheng, Q, Pei, H, Louie, S.G, Stevens, C.R, Zhang, Y.
登録日2018-08-10
公開日2018-11-21
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Facile chemoenzymatic synthesis of a novel stable mimic of NAD.
Chem Sci, 9, 2018
7DCY
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BU of 7dcy by Molmil
Apo form of Mycoplasma genitalium RNase R
分子名称: MAGNESIUM ION, Ribonuclease R
著者Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X.
登録日2020-10-27
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.972 Å)
主引用文献Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation.
Nucleic Acids Res., 49, 2021
7DIC
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Mycoplasma genitalium RNase R in complex with single-stranded RNA
分子名称: MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Ribonuclease R
著者Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X.
登録日2020-11-18
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.242 Å)
主引用文献Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation.
Nucleic Acids Res., 49, 2021
7DOL
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BU of 7dol by Molmil
Mycoplasma genitalium RNase R in complex with double-stranded RNA
分子名称: MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), Ribonuclease R
著者Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X.
登録日2020-12-14
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation.
Nucleic Acids Res., 49, 2021
7DID
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BU of 7did by Molmil
Mycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNA
分子名称: MAGNESIUM ION, RNA (5'-R(*AP*AP*AP*A)-3'), Ribonuclease R
著者Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X.
登録日2020-11-18
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation.
Nucleic Acids Res., 49, 2021
3EAO
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BU of 3eao by Molmil
Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1, ...
著者Sandalova, T, Cheng, Q, Lindqvist, Y, Arner, E.
登録日2008-08-26
公開日2008-12-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure and catalysis of the selenoprotein thioredoxin reductase 1.
J.Biol.Chem., 284, 2009
3EAN
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BU of 3ean by Molmil
Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1
著者Sandalova, T, Cheng, Q, Lindqvist, Y, Arner, E.
登録日2008-08-26
公開日2008-12-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure and catalysis of the selenoprotein thioredoxin reductase 1.
J.Biol.Chem., 284, 2009

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