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PDB: 2172 件

3QB9
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Mycobacterium tuberculosis bacterioferritin, BfrA
分子名称: Bacterioferritin, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者McMath, L.M, Goulding, C.W, TB Structural Genomics Consortium (TBSGC)
登録日2011-01-12
公開日2012-02-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Mycobacterium tuberculosis bacterioferritin, BfrA
To be Published
3QLK
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Crystal Structure of RipA from Yersinia pestis
分子名称: Coenzyme A transferase
著者Torres, R, Goulding, C.W.
登録日2011-02-02
公開日2012-01-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Biochemical, structural and molecular dynamics analyses of the potential virulence factor RipA from Yersinia pestis.
Plos One, 6, 2011
3R91
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Macrocyclic lactams as potent Hsp90 inhibitors with excellent tumor exposure and extended biomarker activity.
分子名称: (6S)-4,6,15,15,18-pentamethyl-5,17-dioxo-2,3,4,5,6,7,14,15,16,17-decahydro-1H-12,8-(metheno)[1,4,9]triazacyclotetradecino[9,8-a]indole-9-carboxamide, Heat shock protein HSP 90-alpha
著者Zapf, C.W, Bloom, J.D, McBean, J.L, Dushin, R.G, Nittoli, T, Otteng, M, Ingalls, C, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E, Hu, Y, Levin, J.I.
登録日2011-03-24
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.579 Å)
主引用文献Macrocyclic lactams as potent Hsp90 inhibitors with excellent tumor exposure and extended biomarker activity.
Bioorg.Med.Chem.Lett., 21, 2011
3RKI
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BU of 3rki by Molmil
Structural basis for immunization with post-fusion RSV F to elicit high neutralizing antibody titers
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
著者Swanson, K.A, Settembre, E.C, Shaw, C.A, Dey, A.K, Rappuoli, R, Mandl, C.W, Dormitzer, P.D, Carfi, A.
登録日2011-04-18
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for immunization with postfusion respiratory syncytial virus fusion F glycoprotein (RSV F) to elicit high neutralizing antibody titers.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QX3
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Human topoisomerase IIbeta in complex with DNA and etoposide
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'), ...
著者Wu, C.C, Li, T.K, Farh, L, Lin, L.Y, Lin, T.S, Yu, Y.J, Yen, T.J, Chiang, C.W, Chan, N.L.
登録日2011-03-01
公開日2011-07-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献Structural basis of type II topoisomerase inhibition by the anticancer drug etoposide
Science, 333, 2011
8SSM
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Citrobacter rodentium contact dependent growth inhibition (CDI) toxin (CdiA-CT) and immunity (CdiI) complex
分子名称: CdiI (immunity protein), Contact-dependent inhibitor A, GLYCEROL
著者Cuthbert, B.J, Goulding, C.W, Hayes, C.S, Nhan, D.Q.
登録日2023-05-08
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural and biochemical studies into Citrobacter rodentium contact dependent growth inhibition (CDI) peptidase toxin
To Be Published
8SSK
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Citrobacter rodentium contact dependent growth inhibition (CDI) entry and toxin (CdiA-CT) domains
分子名称: ACETATE ION, CALCIUM ION, Contact-dependent inhibitor A, ...
著者Cuthbert, B.J, Goulding, C.W, Hayes, C.S, Nhan, D.Q.
登録日2023-05-08
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Citrobacter rodentium contact dependent growth inhibition (CDI) entry and toxin (CdiA-CT) domains
To Be Published
3SIK
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BU of 3sik by Molmil
Crystal structure of the Bacillus anthracis hemophore IsdX1 complexed with heme
分子名称: Conserved domain protein, PROTOPORPHYRIN IX CONTAINING FE
著者Owens, C.P, Goulding, C.W.
登録日2011-06-19
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献Differential function of lip residues in the mechanism and biology of an anthrax hemophore.
Plos Pathog., 8, 2012
8SXW
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BU of 8sxw by Molmil
X-ray crystal structure of UDP- 2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase from Thermus thermophilus strain HB27, D98N mutation, apo structure at pH 6
分子名称: CHLORIDE ION, SODIUM ION, UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase
著者Kroft, C.W, Thoden, J.B, Holden, H.M.
登録日2023-05-24
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of a bacterial UDP-sugar 2-epimerase reveals the active site architecture before and after catalysis.
J.Biol.Chem., 299, 2023
8SYD
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BU of 8syd by Molmil
X-ray crystal structure of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase from Thermus thermophilus strain HB27, D98N variant in the presence of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid and UDP-N-acetylglucosamine at pH 6
分子名称: (2~{S},3~{S},4~{R},5~{R},6~{R})-4,5-diacetamido-6-[[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxane-2-carboxylic acid, CHLORIDE ION, UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase, ...
著者Kroft, C.W, Thoden, J.B, Holden, H.M.
登録日2023-05-25
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of a bacterial UDP-sugar 2-epimerase reveals the active site architecture before and after catalysis.
J.Biol.Chem., 299, 2023
8SYB
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BU of 8syb by Molmil
X-ray crystal structure of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase from Thermus thermophilus strain HB27, D98N variant in the presence of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid and UDP-N-acetylglucosamine at pH 9
分子名称: (2~{S},3~{S},4~{R},5~{R},6~{R})-4,5-diacetamido-6-[[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxane-2-carboxylic acid, CHLORIDE ION, SODIUM ION, ...
著者Kroft, C.W, Thoden, J.B, Holden, H.M.
登録日2023-05-25
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of a bacterial UDP-sugar 2-epimerase reveals the active site architecture before and after catalysis.
J.Biol.Chem., 299, 2023
8T3W
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BU of 8t3w by Molmil
Structure of Bre1-nucleosome complex - state2
分子名称: 601 DNA strand 1, 601 DNA strand 2, E3 ubiquitin-protein ligase BRE1, ...
著者Zhao, F, Hicks, C.W, Wolberger, C.
登録日2023-06-07
公開日2023-10-18
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Mechanism of histone H2B monoubiquitination by Bre1.
Nat.Struct.Mol.Biol., 30, 2023
8T3T
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BU of 8t3t by Molmil
Structure of Bre1-nucleosome complex - state3
分子名称: 601 DNA strand 1, 601 DNA strand 2, E3 ubiquitin-protein ligase BRE1, ...
著者Zhao, F, Hicks, C.W, Wolberger, C.
登録日2023-06-07
公開日2023-10-18
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Mechanism of histone H2B monoubiquitination by Bre1.
Nat.Struct.Mol.Biol., 30, 2023
8T3Y
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BU of 8t3y by Molmil
Structure of Bre1-nucleosome complex - state1
分子名称: 601 DNA Strand 1, 601 DNA Strand 2, E3 ubiquitin-protein ligase BRE1, ...
著者Zhao, F, Hicks, C.W, Wolberger, C.
登録日2023-06-08
公開日2023-10-18
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Mechanism of histone H2B monoubiquitination by Bre1.
Nat.Struct.Mol.Biol., 30, 2023
8T9L
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BU of 8t9l by Molmil
Pom34-Pom152 membrane attachment site yeast NPC
分子名称: Nucleoporin POM152, Nucleoporin POM34
著者Akey, C.W, Echeverria, I, Ouch, C, Fernandez-Martinez, J, Rout, M.P.
登録日2023-06-24
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Implications of a multiscale structure of the yeast nuclear pore complex.
Mol.Cell, 83, 2023
3R92
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Discovery of a macrocyclic o-aminobenzamide Hsp90 inhibitor with heterocyclic tether that shows extended biomarker activity and in vivo efficacy in a mouse xenograft model.
分子名称: (3aR)-13,13,16-trimethyl-15-oxo-1,2,3,3a,4,5,12,14,15,17,18,19-dodecahydro-13H-10,6-(metheno)pyrrolo[2',1':3,4][1,4,9]triazacyclotetradecino[9,8-a]indole-7-carboxamide, Heat shock protein HSP 90-alpha
著者Zapf, C.W, Bloom, J.D, McBean, J.L, Dushin, R.G, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E.M, Levin, J.I.
登録日2011-03-24
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5801 Å)
主引用文献Discovery of a macrocyclic o-aminobenzamide Hsp90 inhibitor with heterocyclic tether that shows extended biomarker activity and in vivo efficacy in a mouse xenograft model.
Bioorg.Med.Chem.Lett., 21, 2011
5M2N
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BU of 5m2n by Molmil
Crystal Structure of Elongator subunit Elp2
分子名称: Elongator complex protein 2
著者Glatt, S, Mueller, C.W.
登録日2016-10-13
公開日2016-12-28
最終更新日2017-09-06
実験手法X-RAY DIFFRACTION (2.812 Å)
主引用文献Architecture of the yeast Elongator complex.
EMBO Rep., 18, 2017
3S8D
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BU of 3s8d by Molmil
Crystal Structure of RipA from Yersinia pestis
分子名称: Coenzyme A transferase
著者Torres, R, Goulding, C.W.
登録日2011-05-27
公開日2012-01-18
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Biochemical, structural and molecular dynamics analyses of the potential virulence factor RipA from Yersinia pestis.
Plos One, 6, 2011
8SX0
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BU of 8sx0 by Molmil
Bordetella filamentous hemagglutinin (FhaB) C-terminal domain
分子名称: CALCIUM ION, Filamentous hemagglutinin, GLYCEROL, ...
著者Cuthbert, B.J, Goulding, C.W, Hayes, C.S, Costello, M.S.
登録日2023-05-19
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Bordetella filamentous hemagglutinin (FhaB) C-terminal domain
To Be Published
3RKZ
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BU of 3rkz by Molmil
Discovery of a stable macrocyclic o-aminobenzamide Hsp90 inhibitor capable of significantly decreasing tumor volume in a mouse xenograft model.
分子名称: (5R,6S)-3-(L-alanyl)-5,6,15,15,18-pentamethyl-17-oxo-2,3,4,5,6,7,14,15,16,17-decahydro-1H-12,8-(metheno)[1,5,9]triazacyclotetradecino[1,2-a]indole-9-carboxamide, Heat shock protein HSP 90-alpha
著者Zapf, C.W, Bloom, J.D, Li, Z, Dushin, R.G, Nittoli, T, Otteng, M, Nikitenko, A, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E, Olland, A, Johnson, M, Levin, J.I.
登録日2011-04-18
公開日2011-07-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5693 Å)
主引用文献Discovery of a stable macrocyclic o-aminobenzamide Hsp90 inhibitor which significantly decreases tumor volume in a mouse xenograft model.
Bioorg.Med.Chem.Lett., 21, 2011
3RZU
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BU of 3rzu by Molmil
The Crystal Structure of the Catalytic Domain of AMSH
分子名称: STAM-binding protein, ZINC ION
著者Davies, C.W, Das, C.
登録日2011-05-12
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Thermodynamic Comparison of the Catalytic Domain of AMSH and AMSH-LP: Nearly Identical Fold but Different Stability.
J.Mol.Biol., 413, 2011
3RZV
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BU of 3rzv by Molmil
The Crystal Structure of a E280A Mutant of the Catalytic Domain of AMSH
分子名称: STAM-binding protein, ZINC ION
著者Davies, C.W, Das, C.
登録日2011-05-12
公開日2011-10-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural and Thermodynamic Comparison of the Catalytic Domain of AMSH and AMSH-LP: Nearly Identical Fold but Different Stability.
J.Mol.Biol., 413, 2011
8PX2
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BU of 8px2 by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1,3-dimethyl-5-(1-((tetrahydro-2H-pyran-4-yl)methyl)-1H-benzo[d]imidazol-2-yl)pyridin-2(1H)-one
分子名称: 1,3-dimethyl-5-[1-(oxan-4-ylmethyl)benzimidazol-2-yl]pyridin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
著者Chung, C.W.
登録日2023-07-22
公開日2023-10-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.622 Å)
主引用文献Structure-Guided Design of a Domain-Selective Bromodomain and Extra Terminal N-Terminal Bromodomain Chemical Probe.
J.Med.Chem., 66, 2023
8PXM
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BU of 8pxm by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (1R,1'R)-7,7'-(pentane-1,5-diylbis(oxy))bis(1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one)
分子名称: (1R)-7-[5-[[(1R)-1,3-dimethyl-2-oxidanylidene-1H-3-benzazepin-7-yl]oxy]pentoxy]-1,3-dimethyl-1H-3-benzazepin-2-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Chung, C.W.
登録日2023-07-23
公開日2023-10-04
実験手法X-RAY DIFFRACTION (2.378 Å)
主引用文献Design and Characterization of 1,3-Dihydro-2 H -benzo[ d ]azepin-2-ones as Rule-of-5 Compliant Bivalent BET Inhibitors.
Acs Med.Chem.Lett., 14, 2023
8PX8
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BU of 8px8 by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (S)-5-(1-((1-acetylpiperidin-3-yl)methyl)-5-bromo-1H-benzo[d]imidazol-2-yl)-1,3-dimethylpyridin-2(1H)-one
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[5-bromanyl-1-[[(3~{S})-1-ethanoylpiperidin-3-yl]methyl]benzimidazol-2-yl]-1,3-dimethyl-pyridin-2-one, ...
著者Chung, C.W.
登録日2023-07-22
公開日2023-10-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Structure-Guided Design of a Domain-Selective Bromodomain and Extra Terminal N-Terminal Bromodomain Chemical Probe.
J.Med.Chem., 66, 2023

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件を2024-07-17に公開中

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