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PDB: 1282 results

5CPL
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BU of 5cpl by Molmil
The crystal structure of Xenobiotic reductase A (XenA) from Pseudomonas putida in complex with a nicotinamide mimic (mNH2)
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 1-benzyl-1,4,5,6-tetrahydropyridine-3-carboxamide, CALCIUM ION, ...
Authors:Knaus, T, Paul, C.E, Levy, C.W, Mutti, F.G, Hollmann, F, Scrutton, N.S.
Deposit date:2015-07-21
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Better than Nature: Nicotinamide Biomimetics That Outperform Natural Coenzymes.
J.Am.Chem.Soc., 138, 2016
5CPN
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BU of 5cpn by Molmil
Crystal structure of XenA from Pseudomonas putida in complex with an NADH mimic (mAc)
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 1-[(3S)-1-benzylpiperidin-3-yl]ethanone, Xenobiotic reductase
Authors:Knaus, T, Paul, C.E, Levy, C.W, Mutti, F.G, Hollmann, F, Scrutton, N.S.
Deposit date:2015-07-21
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Better than Nature: Nicotinamide Biomimetics That Outperform Natural Coenzymes.
J.Am.Chem.Soc., 138, 2016
5BRV
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BU of 5brv by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
Descriptor: Carbonic anhydrase 2, ZINC ION, pentamethylcyclopentadienyl iridium [N-benzensulfonamide-(2-pyridylmethyl-4-benzensulfonamide)amin] chloride
Authors:Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
Deposit date:2015-06-01
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5BRU
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BU of 5bru by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
Descriptor: Carbonic anhydrase 2, SULFATE ION, ZINC ION, ...
Authors:Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
Deposit date:2015-06-01
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5CPM
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BU of 5cpm by Molmil
XenA from Pseudomonas putida in complex with NADPH4.
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Xenobiotic reductase
Authors:Knaus, T, Paul, C.E, Levy, C.W, Mutti, F.G, Hollmann, F, Scrutton, N.S.
Deposit date:2015-07-21
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Better than Nature: Nicotinamide Biomimetics That Outperform Natural Coenzymes.
J.Am.Chem.Soc., 138, 2016
5BRW
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BU of 5brw by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
Descriptor: ACETATE ION, Carbonic anhydrase 2, SULFATE ION, ...
Authors:Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
Deposit date:2015-06-01
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
1MZF
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BU of 1mzf by Molmil
Human Factor inhibiting HIF (FIH1) in Complex with 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, factor inhibiting HIF1
Authors:Dann III, C.E, Bruick, R.K, Deisenhofer, J.
Deposit date:2002-10-07
Release date:2002-11-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Factor-Inhibiting Hypoxia-Inducible Factor 1: An Asparaginyl Hydroxylase Involved in the Hypoxic Response Pathway.
Proc.Natl.Acad.Sci.USA, 99, 2002
1NDU
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BU of 1ndu by Molmil
Bacillus lentus subtilisin variant S101G/V104N
Descriptor: CALCIUM ION, Subtilisin Savinase
Authors:Pan, X, Bott, R, Glatz, C.E.
Deposit date:2002-12-09
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Subtilisin surface properties and crystal growth kinetics
J.CRYST.GROWTH, 254, 2003
7KPV
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BU of 7kpv by Molmil
Structure of kinase and Central lobes of yeast CKM
Descriptor: Mediator of RNA polymerase II transcription subunit 12, Mediator of RNA polymerase II transcription subunit 13, Meiotic mRNA stability protein kinase SSN3, ...
Authors:Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L.
Deposit date:2020-11-12
Release date:2021-01-27
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module.
Sci Adv, 7, 2021
1PGP
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BU of 1pgp by Molmil
CRYSTALLOGRAPHIC STUDY OF COENZYME, COENZYME ANALOGUE AND SUBSTRATE BINDING IN 6-PHOSPHOGLUCONATE DEHYDROGENASE: IMPLICATIONS FOR NADP SPECIFICITY AND THE ENZYME MECHANISM
Descriptor: 6-PHOSPHOGLUCONATE DEHYDROGENASE, 6-PHOSPHOGLUCONIC ACID, SULFATE ION
Authors:Adams, M.J, Phillips, C, Gover, S, Naylor, C.E.
Deposit date:1994-07-18
Release date:1995-02-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic study of coenzyme, coenzyme analogue and substrate binding in 6-phosphogluconate dehydrogenase: implications for NADP specificity and the enzyme mechanism.
Structure, 2, 1994
7KGE
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BU of 7kge by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
Descriptor: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGI
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BU of 7kgi by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-III
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGF
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BU of 7kgf by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-III
Descriptor: Efflux pump membrane transporter
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGH
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BU of 7kgh by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGD
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BU of 7kgd by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-I
Descriptor: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGG
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BU of 7kgg by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-I
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
1NN4
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BU of 1nn4 by Molmil
Structural Genomics, RpiB/AlsB
Descriptor: Ribose 5-phosphate isomerase B
Authors:Zhang, R.G, Andersson, C.E, Mowbray, S.L, Savchenko, A, Skarina, T, Evdokimova, E, Beasley, S.L, Arrowsmith, C, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-01-12
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 2.2 A resolution structure of RpiB/AlsB from Escherichia coli illustrates a new approach to the ribose-5-phosphate isomerase reaction.
J.Mol.Biol., 332, 2003
1Q07
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BU of 1q07 by Molmil
Crystal structure of the Au(I) form of E. coli CueR, a copper efflux regulator
Descriptor: GOLD ION, Transcriptional regulator cueR
Authors:Changela, A, Chen, K, Xue, Y, Holschen, J, Outten, C.E, O'Halloran, T.V, Mondragon, A.
Deposit date:2003-07-15
Release date:2003-09-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
Science, 301, 2003
7JT1
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BU of 7jt1 by Molmil
70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Carbone, C.E, Korostelev, A.A.
Deposit date:2020-08-16
Release date:2020-11-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
7JZ2
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BU of 7jz2 by Molmil
Succinate: quinone oxidoreductase SQR from E.coli K12
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Lyu, M, Su, C.-C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W.
Deposit date:2020-09-01
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
7JSS
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BU of 7jss by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Carbone, C.E, Korostelev, A.A.
Deposit date:2020-08-15
Release date:2020-11-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
1MWY
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BU of 1mwy by Molmil
Solution structure of the N-terminal domain of ZntA in the apo-form
Descriptor: ZntA
Authors:Banci, L, Bertini, I, Ciofi-Baffoni, S, Finney, L.A, Outten, C.E, O'Halloran, T.V.
Deposit date:2002-10-01
Release date:2002-11-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A new zinc-protein coordination site in intracellular metal trafficking: solution structure of the apo and Zn(II) forms of ZntA (46-118)
J.Mol.Biol., 323, 2002
7JSZ
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BU of 7jsz by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Carbone, C.E, Korostelev, A.A.
Deposit date:2020-08-16
Release date:2020-11-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
1MWZ
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BU of 1mwz by Molmil
Solution structure of the N-terminal domain of ZntA in the Zn(II)-form
Descriptor: ZINC ION, ZntA
Authors:Banci, L, Bertini, I, Ciofi-Baffoni, S, Finney, L.A, Outten, C.E, O'Halloran, T.V.
Deposit date:2002-10-01
Release date:2002-11-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A new zinc-protein coordination site in intracellular metal trafficking: solution structure of the apo and Zn(II) forms of ZntA (46-118)
J.Mol.Biol., 323, 2002
7K7K
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BU of 7k7k by Molmil
Structure of the EPEC type III secretion injectisome EspA filament
Descriptor: Translocon EspA
Authors:Lyons, B.J.E, Atkinson, C.E, Strynadka, N.C.J.
Deposit date:2020-09-23
Release date:2020-12-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Cryo-EM structure of the EspA filament from enteropathogenic Escherichia coli: Revealing the mechanism of effector translocation in the T3SS.
Structure, 29, 2021

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數據於2024-09-04公開中

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